EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000007489 (Gene tree)
Gene ID: 113134902
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 8641 bases
Position: chrOOHQ01000035.1:19795836-19804476
Accession: 113134902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000011042	KH_1	PF00013.29	2.1e-68	1	4
ENSMAMP00000011042	KH_1	PF00013.29	2.1e-68	2	4
ENSMAMP00000011042	KH_1	PF00013.29	2.1e-68	3	4
ENSMAMP00000011042	KH_1	PF00013.29	2.1e-68	4	4
ENSMAMP00000011065	KH_1	PF00013.29	2.4e-68	1	4
ENSMAMP00000011065	KH_1	PF00013.29	2.4e-68	2	4
ENSMAMP00000011065	KH_1	PF00013.29	2.4e-68	3	4
ENSMAMP00000011065	KH_1	PF00013.29	2.4e-68	4	4
ENSMAMP00000011042	KH_2	PF07650.17	7.7e-21	1	2
ENSMAMP00000011042	KH_2	PF07650.17	7.7e-21	2	2
ENSMAMP00000011065	KH_2	PF07650.17	8.5e-21	1	2
ENSMAMP00000011065	KH_2	PF07650.17	8.5e-21	2	2
ENSMAMP00000011042	DUF1897	PF09005.10	2.7e-15	1	2
ENSMAMP00000011042	DUF1897	PF09005.10	2.7e-15	2	2
ENSMAMP00000011065	DUF1897	PF09005.10	3.5e-15	1	2
ENSMAMP00000011065	DUF1897	PF09005.10	3.5e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000011328	-	2051	-	ENSMAMP00000011042	665 (aa)	XP_026170265	UPI000E465769
ENSMAMT00000011351	-	3228	-	ENSMAMP00000011065	678 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000007489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000007489's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000007489	fubp1	53	32.335	ENSMAMG00000008545	igf2bp3	62	31.034
ENSMAMG00000007489	fubp1	54	38.272	ENSMAMG00000010416	PCBP2	72	38.272
ENSMAMG00000007489	fubp1	89	48.849	ENSMAMG00000013259	fubp3	97	47.611
ENSMAMG00000007489	fubp1	58	39.506	ENSMAMG00000024156	pcbp2	96	39.506
ENSMAMG00000007489	fubp1	90	49.900	ENSMAMG00000019009	-	92	45.738
ENSMAMG00000007489	fubp1	97	54.252	ENSMAMG00000011746	khsrp	95	53.451
ENSMAMG00000007489	fubp1	55	38.889	ENSMAMG00000014389	zgc:110045	74	32.323
ENSMAMG00000007489	fubp1	53	35.802	ENSMAMG00000010163	pcbp4	61	35.802

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000007489	fubp1	60	67.241	ENSG00000162613	FUBP1	99	69.298	Homo_sapiens
ENSMAMG00000007489	fubp1	94	94.778	ENSAPOG00000014845	fubp1	92	94.778	Acanthochromis_polyacanthus
ENSMAMG00000007489	fubp1	99	88.048	ENSACIG00000020024	fubp1	99	86.687	Amphilophus_citrinellus
ENSMAMG00000007489	fubp1	99	82.815	ENSAPEG00000012232	fubp1	99	85.949	Amphiprion_percula
ENSMAMG00000007489	fubp1	99	95.777	ENSATEG00000018619	fubp1	99	95.777	Anabas_testudineus
ENSMAMG00000007489	fubp1	68	76.321	ENSACAG00000006310	FUBP1	97	70.000	Anolis_carolinensis
ENSMAMG00000007489	fubp1	99	95.331	ENSACLG00000006708	fubp1	99	95.317	Astatotilapia_calliptera
ENSMAMG00000007489	fubp1	85	85.586	ENSAMXG00000005525	fubp1	100	82.703	Astyanax_mexicanus
ENSMAMG00000007489	fubp1	61	51.235	ENSTSYG00000000148	FUBP1	100	69.505	Carlito_syrichta
ENSMAMG00000007489	fubp1	52	84.677	ENSCAPG00000011052	-	65	84.677	Cavia_aperea
ENSMAMG00000007489	fubp1	90	62.604	ENSCCAG00000036537	FUBP1	99	63.158	Cebus_capucinus
ENSMAMG00000007489	fubp1	99	89.410	ENSCSEG00000021412	fubp1	98	89.864	Cynoglossus_semilaevis
ENSMAMG00000007489	fubp1	99	92.180	ENSCVAG00000014487	fubp1	99	92.782	Cyprinodon_variegatus
ENSMAMG00000007489	fubp1	99	80.499	ENSDARG00000029248	fubp1	99	81.378	Danio_rerio
ENSMAMG00000007489	fubp1	77	57.576	ENSDNOG00000034565	-	87	49.123	Dasypus_novemcinctus
ENSMAMG00000007489	fubp1	72	76.487	ENSETEG00000000948	-	58	76.771	Echinops_telfairi
ENSMAMG00000007489	fubp1	77	68.254	ENSEBUG00000016143	fubp1	64	61.194	Eptatretus_burgeri
ENSMAMG00000007489	fubp1	74	83.108	ENSEEUG00000001287	FUBP1	87	66.536	Erinaceus_europaeus
ENSMAMG00000007489	fubp1	99	82.641	ENSELUG00000007990	fubp1	99	83.828	Esox_lucius
ENSMAMG00000007489	fubp1	99	92.609	ENSFHEG00000005230	fubp1	99	93.213	Fundulus_heteroclitus
ENSMAMG00000007489	fubp1	99	78.932	ENSGMOG00000003370	fubp1	99	82.051	Gadus_morhua
ENSMAMG00000007489	fubp1	63	79.391	ENSGALG00000008939	FUBP1	99	70.649	Gallus_gallus
ENSMAMG00000007489	fubp1	99	94.419	ENSGAFG00000020972	fubp1	99	95.023	Gambusia_affinis
ENSMAMG00000007489	fubp1	99	87.743	ENSGACG00000016563	fubp1	99	87.406	Gasterosteus_aculeatus
ENSMAMG00000007489	fubp1	99	95.613	ENSHBUG00000009835	fubp1	99	95.613	Haplochromis_burtoni
ENSMAMG00000007489	fubp1	99	93.413	ENSHCOG00000000910	fubp1	99	94.012	Hippocampus_comes
ENSMAMG00000007489	fubp1	99	82.309	ENSIPUG00000009896	fubp1	99	83.058	Ictalurus_punctatus
ENSMAMG00000007489	fubp1	99	92.042	ENSKMAG00000018897	fubp1	99	92.042	Kryptolebias_marmoratus
ENSMAMG00000007489	fubp1	99	94.337	ENSLBEG00000012700	fubp1	97	94.933	Labrus_bergylta
ENSMAMG00000007489	fubp1	98	81.353	ENSLOCG00000003745	fubp1	99	80.560	Lepisosteus_oculatus
ENSMAMG00000007489	fubp1	61	54.601	ENSLAFG00000003273	FUBP1	99	71.280	Loxodonta_africana
ENSMAMG00000007489	fubp1	68	74.636	ENSMNEG00000045212	FUBP1	100	69.010	Macaca_nemestrina
ENSMAMG00000007489	fubp1	99	95.461	ENSMZEG00005024298	fubp1	99	95.461	Maylandia_zebra
ENSMAMG00000007489	fubp1	75	54.658	ENSMAUG00000016428	Fubp1	98	72.109	Mesocricetus_auratus
ENSMAMG00000007489	fubp1	85	91.696	ENSMMOG00000019463	fubp1	99	90.141	Mola_mola
ENSMAMG00000007489	fubp1	99	95.468	ENSMALG00000015173	fubp1	99	95.468	Monopterus_albus
ENSMAMG00000007489	fubp1	68	78.043	MGP_CAROLIEiJ_G0025740	Fubp1	99	74.953	Mus_caroli
ENSMAMG00000007489	fubp1	68	77.826	ENSMUSG00000028034	Fubp1	99	74.766	Mus_musculus
ENSMAMG00000007489	fubp1	68	77.874	MGP_PahariEiJ_G0027191	Fubp1	99	74.813	Mus_pahari
ENSMAMG00000007489	fubp1	68	78.043	MGP_SPRETEiJ_G0026693	Fubp1	99	74.953	Mus_spretus
ENSMAMG00000007489	fubp1	99	84.720	ENSNBRG00000015099	fubp1	99	85.952	Neolamprologus_brichardi
ENSMAMG00000007489	fubp1	88	68.056	ENSOPRG00000001175	FUBP1	98	59.091	Ochotona_princeps
ENSMAMG00000007489	fubp1	99	51.642	ENSODEG00000003657	-	100	50.299	Octodon_degus
ENSMAMG00000007489	fubp1	99	95.482	ENSONIG00000018381	fubp1	97	95.482	Oreochromis_niloticus
ENSMAMG00000007489	fubp1	58	80.457	ENSOANG00000009777	FUBP1	100	71.268	Ornithorhynchus_anatinus
ENSMAMG00000007489	fubp1	99	82.982	ENSORLG00000003540	fubp1	99	84.036	Oryzias_latipes
ENSMAMG00000007489	fubp1	99	91.604	ENSORLG00020005908	fubp1	95	92.054	Oryzias_latipes_hni
ENSMAMG00000007489	fubp1	99	92.365	ENSORLG00015008779	fubp1	99	91.916	Oryzias_latipes_hsok
ENSMAMG00000007489	fubp1	99	91.892	ENSOMEG00000021943	fubp1	97	92.342	Oryzias_melastigma
ENSMAMG00000007489	fubp1	68	77.371	ENSOARG00000013259	FUBP1	99	72.018	Ovis_aries
ENSMAMG00000007489	fubp1	100	77.761	ENSPMGG00000009060	fubp1	99	79.315	Periophthalmus_magnuspinnatus
ENSMAMG00000007489	fubp1	61	57.500	ENSPMAG00000001644	-	93	57.500	Petromyzon_marinus
ENSMAMG00000007489	fubp1	99	93.062	ENSPFOG00000000238	fubp1	99	93.665	Poecilia_formosa
ENSMAMG00000007489	fubp1	99	85.477	ENSPLAG00000021170	fubp1	99	90.634	Poecilia_latipinna
ENSMAMG00000007489	fubp1	92	95.074	ENSPMEG00000004747	fubp1	99	95.074	Poecilia_mexicana
ENSMAMG00000007489	fubp1	99	92.911	ENSPREG00000017911	fubp1	99	93.514	Poecilia_reticulata
ENSMAMG00000007489	fubp1	70	76.632	ENSPPYG00000001219	-	68	77.706	Pongo_abelii
ENSMAMG00000007489	fubp1	85	76.471	ENSPCOG00000024974	FUBP1	99	69.444	Propithecus_coquereli
ENSMAMG00000007489	fubp1	99	95.461	ENSPNYG00000004552	fubp1	99	95.461	Pundamilia_nyererei
ENSMAMG00000007489	fubp1	99	85.501	ENSPNAG00000016207	fubp1	100	85.224	Pygocentrus_nattereri
ENSMAMG00000007489	fubp1	61	54.375	ENSSBOG00000027299	FUBP1	98	71.993	Saimiri_boliviensis_boliviensis
ENSMAMG00000007489	fubp1	76	53.750	ENSSHAG00000005367	FUBP1	99	71.930	Sarcophilus_harrisii
ENSMAMG00000007489	fubp1	99	83.056	ENSSFOG00015010213	fubp1	99	83.056	Scleropages_formosus
ENSMAMG00000007489	fubp1	99	88.987	ENSSMAG00000012029	fubp1	98	89.280	Scophthalmus_maximus
ENSMAMG00000007489	fubp1	99	98.190	ENSSDUG00000007383	fubp1	98	98.190	Seriola_dumerili
ENSMAMG00000007489	fubp1	99	98.190	ENSSLDG00000022863	fubp1	98	98.190	Seriola_lalandi_dorsalis
ENSMAMG00000007489	fubp1	81	69.728	ENSSARG00000011730	FUBP1	56	89.535	Sorex_araneus
ENSMAMG00000007489	fubp1	99	68.076	ENSSPUG00000008389	FUBP1	100	68.795	Sphenodon_punctatus
ENSMAMG00000007489	fubp1	99	96.380	ENSSPAG00000010161	fubp1	99	96.380	Stegastes_partitus
ENSMAMG00000007489	fubp1	99	87.482	ENSTRUG00000004615	fubp1	99	86.608	Takifugu_rubripes
ENSMAMG00000007489	fubp1	78	82.738	ENSTBEG00000017333	FUBP1	62	88.690	Tupaia_belangeri
ENSMAMG00000007489	fubp1	99	79.880	ENSXCOG00000019354	fubp1	99	79.789	Xiphophorus_couchianus
ENSMAMG00000007489	fubp1	92	94.745	ENSXMAG00000007168	fubp1	99	94.745	Xiphophorus_maculatus