EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000007496 (Gene tree)
Gene ID: 113129696
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 10250 bases
Position: chrOOHQ01000024.1:369383-379632
Accession: 113129696
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000011061	RRM_1	PF00076.22	5.6e-12	1	1
ENSMAMP00000011083	RRM_1	PF00076.22	6.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000011368	-	2016	-	ENSMAMP00000011083	519 (aa)	-	-
ENSMAMT00000011347	-	1992	-	ENSMAMP00000011061	508 (aa)	XP_026161522	UPI000E460958

Gene Model

Click here to download ENSMAMG00000007496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000007496's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000007496	rnpc3	97	50.874	ENSG00000185946	RNPC3	100	52.899	Homo_sapiens
ENSMAMG00000007496	rnpc3	100	74.168	ENSAPOG00000017371	rnpc3	100	74.168	Acanthochromis_polyacanthus
ENSMAMG00000007496	rnpc3	97	50.097	ENSAMEG00000001694	RNPC3	95	51.093	Ailuropoda_melanoleuca
ENSMAMG00000007496	rnpc3	99	70.276	ENSACIG00000021043	rnpc3	99	70.079	Amphilophus_citrinellus
ENSMAMG00000007496	rnpc3	100	74.364	ENSAOCG00000014052	rnpc3	98	74.364	Amphiprion_ocellaris
ENSMAMG00000007496	rnpc3	100	74.364	ENSAPEG00000008739	rnpc3	98	74.364	Amphiprion_percula
ENSMAMG00000007496	rnpc3	100	73.450	ENSATEG00000021263	rnpc3	100	73.450	Anabas_testudineus
ENSMAMG00000007496	rnpc3	89	51.844	ENSAPLG00000015605	RNPC3	99	52.052	Anas_platyrhynchos
ENSMAMG00000007496	rnpc3	95	51.004	ENSACAG00000002029	RNPC3	95	51.619	Anolis_carolinensis
ENSMAMG00000007496	rnpc3	97	50.969	ENSANAG00000019950	RNPC3	95	52.191	Aotus_nancymaae
ENSMAMG00000007496	rnpc3	99	72.835	ENSACLG00000014702	rnpc3	99	72.835	Astatotilapia_calliptera
ENSMAMG00000007496	rnpc3	99	57.864	ENSAMXG00000033372	rnpc3	99	57.476	Astyanax_mexicanus
ENSMAMG00000007496	rnpc3	97	50.291	ENSBTAG00000019091	RNPC3	95	51.497	Bos_taurus
ENSMAMG00000007496	rnpc3	96	51.633	ENSCJAG00000035686	RNPC3	95	51.411	Callithrix_jacchus
ENSMAMG00000007496	rnpc3	97	50.292	ENSCAFG00000019972	RNPC3	95	51.503	Canis_familiaris
ENSMAMG00000007496	rnpc3	97	50.097	ENSCAFG00020011300	RNPC3	95	51.303	Canis_lupus_dingo
ENSMAMG00000007496	rnpc3	97	51.287	ENSCHIG00000020361	RNPC3	95	51.195	Capra_hircus
ENSMAMG00000007496	rnpc3	97	50.485	ENSTSYG00000030256	RNPC3	95	51.497	Carlito_syrichta
ENSMAMG00000007496	rnpc3	86	44.719	ENSCAPG00000013600	RNPC3	99	45.045	Cavia_aperea
ENSMAMG00000007496	rnpc3	97	50.775	ENSCPOG00000031638	RNPC3	95	51.992	Cavia_porcellus
ENSMAMG00000007496	rnpc3	97	50.581	ENSCCAG00000024301	RNPC3	95	51.793	Cebus_capucinus
ENSMAMG00000007496	rnpc3	96	40.974	ENSCATG00000035930	-	52	46.000	Cercocebus_atys
ENSMAMG00000007496	rnpc3	97	50.775	ENSCATG00000002086	RNPC3	95	51.992	Cercocebus_atys
ENSMAMG00000007496	rnpc3	97	49.805	ENSCLAG00000005169	RNPC3	95	51.400	Chinchilla_lanigera
ENSMAMG00000007496	rnpc3	97	50.775	ENSCSAG00000001519	RNPC3	95	51.992	Chlorocebus_sabaeus
ENSMAMG00000007496	rnpc3	97	52.191	ENSCPBG00000028311	RNPC3	95	53.094	Chrysemys_picta_bellii
ENSMAMG00000007496	rnpc3	95	34.714	ENSCING00000021276	-	99	33.992	Ciona_intestinalis
ENSMAMG00000007496	rnpc3	61	51.538	ENSCSAVG00000002800	-	75	52.344	Ciona_savignyi
ENSMAMG00000007496	rnpc3	97	50.388	ENSCANG00000031444	RNPC3	95	51.594	Colobus_angolensis_palliatus
ENSMAMG00000007496	rnpc3	96	48.047	ENSCGRG00001019276	Rnpc3	95	50.803	Cricetulus_griseus_chok1gshd
ENSMAMG00000007496	rnpc3	89	46.105	ENSCGRG00000000053	Rnpc3	99	49.024	Cricetulus_griseus_crigri
ENSMAMG00000007496	rnpc3	99	69.020	ENSCSEG00000013475	rnpc3	99	69.020	Cynoglossus_semilaevis
ENSMAMG00000007496	rnpc3	100	70.760	ENSCVAG00000002645	rnpc3	100	70.760	Cyprinodon_variegatus
ENSMAMG00000007496	rnpc3	98	57.791	ENSDARG00000011247	rnpc3	97	60.040	Danio_rerio
ENSMAMG00000007496	rnpc3	97	50.097	ENSDNOG00000044555	-	95	51.491	Dasypus_novemcinctus
ENSMAMG00000007496	rnpc3	97	50.290	ENSDNOG00000047498	-	95	51.690	Dasypus_novemcinctus
ENSMAMG00000007496	rnpc3	97	50.584	ENSDORG00000027343	Rnpc3	95	51.800	Dipodomys_ordii
ENSMAMG00000007496	rnpc3	97	48.162	ENSEBUG00000002068	rnpc3	97	47.868	Eptatretus_burgeri
ENSMAMG00000007496	rnpc3	97	51.068	ENSEASG00005015957	RNPC3	95	52.183	Equus_asinus_asinus
ENSMAMG00000007496	rnpc3	97	51.060	ENSECAG00000021148	RNPC3	95	52.165	Equus_caballus
ENSMAMG00000007496	rnpc3	98	62.330	ENSELUG00000002264	rnpc3	98	60.700	Esox_lucius
ENSMAMG00000007496	rnpc3	97	50.581	ENSFCAG00000024312	RNPC3	95	51.793	Felis_catus
ENSMAMG00000007496	rnpc3	89	52.484	ENSFALG00000002580	RNPC3	99	52.535	Ficedula_albicollis
ENSMAMG00000007496	rnpc3	97	50.194	ENSFDAG00000019948	RNPC3	95	51.394	Fukomys_damarensis
ENSMAMG00000007496	rnpc3	100	66.339	ENSFHEG00000020647	rnpc3	100	66.339	Fundulus_heteroclitus
ENSMAMG00000007496	rnpc3	100	62.695	ENSGMOG00000019213	rnpc3	99	62.035	Gadus_morhua
ENSMAMG00000007496	rnpc3	98	52.071	ENSGALG00000005162	RNPC3	90	52.268	Gallus_gallus
ENSMAMG00000007496	rnpc3	100	69.020	ENSGAFG00000017236	rnpc3	100	69.020	Gambusia_affinis
ENSMAMG00000007496	rnpc3	100	71.650	ENSGACG00000002048	rnpc3	99	71.845	Gasterosteus_aculeatus
ENSMAMG00000007496	rnpc3	97	53.600	ENSGAGG00000008438	RNPC3	94	53.800	Gopherus_agassizii
ENSMAMG00000007496	rnpc3	96	42.300	ENSGGOG00000026201	-	95	46.185	Gorilla_gorilla
ENSMAMG00000007496	rnpc3	82	72.917	ENSHBUG00000015966	rnpc3	84	72.917	Haplochromis_burtoni
ENSMAMG00000007496	rnpc3	97	50.677	ENSHGLG00000001708	RNPC3	95	51.889	Heterocephalus_glaber_female
ENSMAMG00000007496	rnpc3	97	50.677	ENSHGLG00100003005	RNPC3	95	51.889	Heterocephalus_glaber_male
ENSMAMG00000007496	rnpc3	99	68.288	ENSHCOG00000017135	rnpc3	99	68.288	Hippocampus_comes
ENSMAMG00000007496	rnpc3	99	59.369	ENSIPUG00000002916	rnpc3	99	59.369	Ictalurus_punctatus
ENSMAMG00000007496	rnpc3	97	49.904	ENSSTOG00000025020	RNPC3	95	51.089	Ictidomys_tridecemlineatus
ENSMAMG00000007496	rnpc3	96	50.295	ENSJJAG00000010203	Rnpc3	96	51.200	Jaculus_jaculus
ENSMAMG00000007496	rnpc3	99	71.881	ENSKMAG00000017358	rnpc3	99	71.881	Kryptolebias_marmoratus
ENSMAMG00000007496	rnpc3	100	72.603	ENSLBEG00000024901	rnpc3	98	72.603	Labrus_bergylta
ENSMAMG00000007496	rnpc3	98	53.728	ENSLACG00000005720	RNPC3	91	55.166	Latimeria_chalumnae
ENSMAMG00000007496	rnpc3	99	58.743	ENSLOCG00000007986	rnpc3	99	55.992	Lepisosteus_oculatus
ENSMAMG00000007496	rnpc3	97	50.973	ENSLAFG00000032342	RNPC3	95	53.493	Loxodonta_africana
ENSMAMG00000007496	rnpc3	96	51.176	ENSMFAG00000002004	RNPC3	95	51.992	Macaca_fascicularis
ENSMAMG00000007496	rnpc3	96	37.449	ENSMFAG00000002917	-	98	39.825	Macaca_fascicularis
ENSMAMG00000007496	rnpc3	96	50.980	ENSMMUG00000018039	RNPC3	95	51.793	Macaca_mulatta
ENSMAMG00000007496	rnpc3	78	47.664	ENSMMUG00000002098	-	84	46.606	Macaca_mulatta
ENSMAMG00000007496	rnpc3	96	48.235	ENSMNEG00000033950	RNPC3	95	49.004	Macaca_nemestrina
ENSMAMG00000007496	rnpc3	96	38.398	ENSMNEG00000029209	-	93	38.477	Macaca_nemestrina
ENSMAMG00000007496	rnpc3	96	40.574	ENSMLEG00000034644	-	95	39.638	Mandrillus_leucophaeus
ENSMAMG00000007496	rnpc3	97	50.775	ENSMLEG00000033628	RNPC3	95	51.992	Mandrillus_leucophaeus
ENSMAMG00000007496	rnpc3	99	72.710	ENSMZEG00005020233	rnpc3	99	72.710	Maylandia_zebra
ENSMAMG00000007496	rnpc3	89	51.620	ENSMGAG00000006381	RNPC3	99	51.416	Meleagris_gallopavo
ENSMAMG00000007496	rnpc3	97	48.438	ENSMAUG00000001358	Rnpc3	95	51.205	Mesocricetus_auratus
ENSMAMG00000007496	rnpc3	97	50.097	ENSMICG00000029591	RNPC3	95	51.389	Microcebus_murinus
ENSMAMG00000007496	rnpc3	97	49.123	ENSMOCG00000013423	Rnpc3	95	51.904	Microtus_ochrogaster
ENSMAMG00000007496	rnpc3	100	68.173	ENSMMOG00000005309	rnpc3	100	69.352	Mola_mola
ENSMAMG00000007496	rnpc3	96	52.323	ENSMODG00000002946	RNPC3	95	52.323	Monodelphis_domestica
ENSMAMG00000007496	rnpc3	99	74.951	ENSMALG00000015471	rnpc3	99	74.951	Monopterus_albus
ENSMAMG00000007496	rnpc3	97	48.544	MGP_CAROLIEiJ_G0025555	Rnpc3	96	51.297	Mus_caroli
ENSMAMG00000007496	rnpc3	97	48.356	ENSMUSG00000027981	Rnpc3	99	49.474	Mus_musculus
ENSMAMG00000007496	rnpc3	97	47.977	MGP_PahariEiJ_G0027001	Rnpc3	97	50.693	Mus_pahari
ENSMAMG00000007496	rnpc3	97	48.162	MGP_SPRETEiJ_G0026505	Rnpc3	96	50.895	Mus_spretus
ENSMAMG00000007496	rnpc3	97	51.068	ENSMPUG00000007349	RNPC3	95	52.096	Mustela_putorius_furo
ENSMAMG00000007496	rnpc3	97	48.444	ENSMLUG00000028743	RNPC3	95	51.107	Myotis_lucifugus
ENSMAMG00000007496	rnpc3	97	50.097	ENSNGAG00000010939	Rnpc3	95	51.297	Nannospalax_galili
ENSMAMG00000007496	rnpc3	99	73.031	ENSNBRG00000012196	rnpc3	96	73.031	Neolamprologus_brichardi
ENSMAMG00000007496	rnpc3	97	50.874	ENSNLEG00000012013	RNPC3	95	52.096	Nomascus_leucogenys
ENSMAMG00000007496	rnpc3	97	50.877	ENSODEG00000007612	RNPC3	95	51.406	Octodon_degus
ENSMAMG00000007496	rnpc3	99	73.622	ENSONIG00000004770	rnpc3	99	74.239	Oreochromis_niloticus
ENSMAMG00000007496	rnpc3	92	53.911	ENSOANG00000008220	RNPC3	99	54.123	Ornithorhynchus_anatinus
ENSMAMG00000007496	rnpc3	97	50.194	ENSOCUG00000004016	RNPC3	95	51.485	Oryctolagus_cuniculus
ENSMAMG00000007496	rnpc3	100	68.493	ENSORLG00000005694	rnpc3	100	68.493	Oryzias_latipes
ENSMAMG00000007496	rnpc3	100	68.885	ENSORLG00020005513	rnpc3	100	68.885	Oryzias_latipes_hni
ENSMAMG00000007496	rnpc3	100	68.689	ENSORLG00015002179	rnpc3	100	68.689	Oryzias_latipes_hsok
ENSMAMG00000007496	rnpc3	100	64.695	ENSOMEG00000017737	rnpc3	100	69.472	Oryzias_melastigma
ENSMAMG00000007496	rnpc3	97	51.252	ENSOGAG00000026182	RNPC3	95	52.475	Otolemur_garnettii
ENSMAMG00000007496	rnpc3	97	51.287	ENSOARG00000018719	RNPC3	95	51.195	Ovis_aries
ENSMAMG00000007496	rnpc3	97	51.262	ENSPPAG00000037459	RNPC3	95	52.495	Pan_paniscus
ENSMAMG00000007496	rnpc3	96	43.798	ENSPPAG00000030278	-	97	45.709	Pan_paniscus
ENSMAMG00000007496	rnpc3	97	50.581	ENSPPRG00000020246	RNPC3	95	51.683	Panthera_pardus
ENSMAMG00000007496	rnpc3	97	50.482	ENSPTIG00000009887	RNPC3	97	51.683	Panthera_tigris_altaica
ENSMAMG00000007496	rnpc3	97	50.775	ENSPTRG00000033902	RNPC3	95	51.992	Pan_troglodytes
ENSMAMG00000007496	rnpc3	96	41.860	ENSPTRG00000044227	-	97	45.709	Pan_troglodytes
ENSMAMG00000007496	rnpc3	97	50.874	ENSPANG00000012137	RNPC3	95	52.096	Papio_anubis
ENSMAMG00000007496	rnpc3	96	42.369	ENSPANG00000029957	-	51	44.800	Papio_anubis
ENSMAMG00000007496	rnpc3	99	58.824	ENSPKIG00000008828	rnpc3	99	59.728	Paramormyrops_kingsleyae
ENSMAMG00000007496	rnpc3	65	46.839	ENSPSIG00000007396	RNPC3	99	50.298	Pelodiscus_sinensis
ENSMAMG00000007496	rnpc3	97	56.117	ENSPMGG00000011742	rnpc3	98	59.325	Periophthalmus_magnuspinnatus
ENSMAMG00000007496	rnpc3	92	45.697	ENSPEMG00000020112	Rnpc3	99	49.673	Peromyscus_maniculatus_bairdii
ENSMAMG00000007496	rnpc3	98	40.147	ENSPMAG00000003778	rnpc3	97	42.966	Petromyzon_marinus
ENSMAMG00000007496	rnpc3	96	50.491	ENSPCIG00000004415	-	95	52.323	Phascolarctos_cinereus
ENSMAMG00000007496	rnpc3	99	69.126	ENSPFOG00000009895	rnpc3	99	69.126	Poecilia_formosa
ENSMAMG00000007496	rnpc3	100	69.557	ENSPLAG00000012023	rnpc3	100	69.557	Poecilia_latipinna
ENSMAMG00000007496	rnpc3	99	70.276	ENSPMEG00000003663	rnpc3	99	69.320	Poecilia_mexicana
ENSMAMG00000007496	rnpc3	100	68.919	ENSPREG00000010206	rnpc3	100	69.112	Poecilia_reticulata
ENSMAMG00000007496	rnpc3	81	46.437	ENSPPYG00000001102	RNPC3	94	47.877	Pongo_abelii
ENSMAMG00000007496	rnpc3	99	72.835	ENSPNYG00000020603	rnpc3	99	72.835	Pundamilia_nyererei
ENSMAMG00000007496	rnpc3	99	50.662	ENSPNAG00000000524	rnpc3	92	52.713	Pygocentrus_nattereri
ENSMAMG00000007496	rnpc3	97	48.538	ENSRNOG00000017310	Rnpc3	95	51.303	Rattus_norvegicus
ENSMAMG00000007496	rnpc3	96	48.330	ENSRBIG00000043897	RNPC3	95	49.102	Rhinopithecus_bieti
ENSMAMG00000007496	rnpc3	97	50.775	ENSRROG00000032334	RNPC3	95	51.992	Rhinopithecus_roxellana
ENSMAMG00000007496	rnpc3	98	50.577	ENSSBOG00000024473	RNPC3	96	51.779	Saimiri_boliviensis_boliviensis
ENSMAMG00000007496	rnpc3	96	47.810	ENSSHAG00000011859	RNPC3	95	51.587	Sarcophilus_harrisii
ENSMAMG00000007496	rnpc3	96	63.692	ENSSFOG00015013055	rnpc3	98	63.692	Scleropages_formosus
ENSMAMG00000007496	rnpc3	100	70.291	ENSSMAG00000020346	rnpc3	100	74.951	Scophthalmus_maximus
ENSMAMG00000007496	rnpc3	100	76.413	ENSSDUG00000006600	rnpc3	100	76.413	Seriola_dumerili
ENSMAMG00000007496	rnpc3	100	76.023	ENSSLDG00000007979	rnpc3	100	76.023	Seriola_lalandi_dorsalis
ENSMAMG00000007496	rnpc3	97	53.082	ENSSPUG00000008539	-	94	53.094	Sphenodon_punctatus
ENSMAMG00000007496	rnpc3	97	50.605	ENSSPUG00000003872	-	92	50.605	Sphenodon_punctatus
ENSMAMG00000007496	rnpc3	100	73.425	ENSSPAG00000005633	rnpc3	100	73.228	Stegastes_partitus
ENSMAMG00000007496	rnpc3	97	51.367	ENSSSCG00000037254	RNPC3	95	52.811	Sus_scrofa
ENSMAMG00000007496	rnpc3	89	54.148	ENSTGUG00000004795	-	99	53.261	Taeniopygia_guttata
ENSMAMG00000007496	rnpc3	99	69.020	ENSTNIG00000018963	rnpc3	99	67.255	Tetraodon_nigroviridis
ENSMAMG00000007496	rnpc3	97	50.097	ENSUMAG00000007775	RNPC3	97	51.102	Ursus_maritimus
ENSMAMG00000007496	rnpc3	97	50.097	ENSVVUG00000000331	RNPC3	95	51.303	Vulpes_vulpes
ENSMAMG00000007496	rnpc3	96	42.914	ENSXETG00000025027	rnpc3	96	42.400	Xenopus_tropicalis
ENSMAMG00000007496	rnpc3	100	69.038	ENSXCOG00000005013	rnpc3	100	69.038	Xiphophorus_couchianus
ENSMAMG00000007496	rnpc3	100	70.392	ENSXMAG00000006495	rnpc3	100	70.392	Xiphophorus_maculatus