EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000007515 (Gene tree)
Gene ID: 113144446
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 12807 bases
Position: chrOOHQ01000077.1:13904210-13917016
Accession: 113144446
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000011113	Exo_endo_phos	PF03372.23	1.6e-21	1	1
ENSMAMP00000011130	Exo_endo_phos	PF03372.23	1.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000011400	-	6563	XM_026330517	ENSMAMP00000011113	559 (aa)	XP_026186302	UPI000E45C810
ENSMAMT00000011417	-	5514	-	ENSMAMP00000011130	570 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000007515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000007515's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000007515	cnot6b	62	30.141	ENSMAMG00000014415	pde12	53	30.141
ENSMAMG00000007515	cnot6b	96	75.465	ENSMAMG00000016954	cnot6l	100	73.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000007515	cnot6b	100	86.941	ENSG00000113300	CNOT6	100	94.737	Homo_sapiens
ENSMAMG00000007515	cnot6b	100	99.642	ENSAPOG00000009994	cnot6b	100	99.642	Acanthochromis_polyacanthus
ENSMAMG00000007515	cnot6b	100	86.988	ENSAMEG00000000949	CNOT6	99	86.988	Ailuropoda_melanoleuca
ENSMAMG00000007515	cnot6b	100	96.243	ENSACIG00000016566	cnot6b	100	96.243	Amphilophus_citrinellus
ENSMAMG00000007515	cnot6b	100	99.642	ENSAOCG00000006893	cnot6b	100	99.642	Amphiprion_ocellaris
ENSMAMG00000007515	cnot6b	100	99.642	ENSAPEG00000016949	cnot6b	100	99.642	Amphiprion_percula
ENSMAMG00000007515	cnot6b	100	96.243	ENSATEG00000007862	cnot6b	100	96.243	Anabas_testudineus
ENSMAMG00000007515	cnot6b	100	87.657	ENSAPLG00000012715	CNOT6	99	88.014	Anas_platyrhynchos
ENSMAMG00000007515	cnot6b	100	87.299	ENSACAG00000016548	CNOT6	100	87.299	Anolis_carolinensis
ENSMAMG00000007515	cnot6b	100	86.941	ENSANAG00000030436	CNOT6	96	86.941	Aotus_nancymaae
ENSMAMG00000007515	cnot6b	100	96.780	ENSACLG00000008279	cnot6b	100	96.780	Astatotilapia_calliptera
ENSMAMG00000007515	cnot6b	100	91.413	ENSAMXG00000019140	cnot6a	100	91.413	Astyanax_mexicanus
ENSMAMG00000007515	cnot6b	100	90.340	ENSAMXG00000034694	cnot6b	100	90.340	Astyanax_mexicanus
ENSMAMG00000007515	cnot6b	100	87.299	ENSBTAG00000017362	CNOT6	100	87.299	Bos_taurus
ENSMAMG00000007515	cnot6b	100	86.762	ENSCJAG00000009795	CNOT6	100	86.762	Callithrix_jacchus
ENSMAMG00000007515	cnot6b	100	87.299	ENSCAFG00000000464	CNOT6	100	87.299	Canis_familiaris
ENSMAMG00000007515	cnot6b	100	87.299	ENSCAFG00020002441	CNOT6	100	87.299	Canis_lupus_dingo
ENSMAMG00000007515	cnot6b	100	87.120	ENSCHIG00000019100	CNOT6	100	87.120	Capra_hircus
ENSMAMG00000007515	cnot6b	100	85.689	ENSTSYG00000003982	CNOT6	100	85.689	Carlito_syrichta
ENSMAMG00000007515	cnot6b	100	82.290	ENSCPOG00000035657	CNOT6	100	82.290	Cavia_porcellus
ENSMAMG00000007515	cnot6b	100	82.469	ENSCCAG00000033670	CNOT6	100	82.469	Cebus_capucinus
ENSMAMG00000007515	cnot6b	100	86.941	ENSCATG00000042014	CNOT6	100	86.941	Cercocebus_atys
ENSMAMG00000007515	cnot6b	100	85.689	ENSCLAG00000010489	CNOT6	100	85.689	Chinchilla_lanigera
ENSMAMG00000007515	cnot6b	100	86.941	ENSCSAG00000008165	CNOT6	100	86.941	Chlorocebus_sabaeus
ENSMAMG00000007515	cnot6b	100	86.583	ENSCHOG00000009680	CNOT6	100	86.941	Choloepus_hoffmanni
ENSMAMG00000007515	cnot6b	100	87.835	ENSCPBG00000008908	CNOT6	100	88.193	Chrysemys_picta_bellii
ENSMAMG00000007515	cnot6b	100	87.120	ENSCANG00000026756	CNOT6	100	87.120	Colobus_angolensis_palliatus
ENSMAMG00000007515	cnot6b	100	85.510	ENSCGRG00001011452	Cnot6	100	85.510	Cricetulus_griseus_chok1gshd
ENSMAMG00000007515	cnot6b	100	83.542	ENSCGRG00000010407	Cnot6	100	83.542	Cricetulus_griseus_crigri
ENSMAMG00000007515	cnot6b	100	98.032	ENSCSEG00000010939	cnot6b	100	98.032	Cynoglossus_semilaevis
ENSMAMG00000007515	cnot6b	100	96.422	ENSCVAG00000010538	cnot6b	100	96.422	Cyprinodon_variegatus
ENSMAMG00000007515	cnot6b	100	90.698	ENSDARG00000008255	cnot6a	100	90.698	Danio_rerio
ENSMAMG00000007515	cnot6b	100	89.088	ENSDARG00000101072	cnot6b	100	89.088	Danio_rerio
ENSMAMG00000007515	cnot6b	100	87.299	ENSDNOG00000041644	CNOT6	100	87.299	Dasypus_novemcinctus
ENSMAMG00000007515	cnot6b	100	77.818	ENSDORG00000001708	Cnot6	100	77.818	Dipodomys_ordii
ENSMAMG00000007515	cnot6b	100	69.821	ENSETEG00000006975	CNOT6	100	69.821	Echinops_telfairi
ENSMAMG00000007515	cnot6b	100	87.120	ENSEASG00005012794	-	100	87.120	Equus_asinus_asinus
ENSMAMG00000007515	cnot6b	90	82.072	ENSEASG00005012957	-	99	82.072	Equus_asinus_asinus
ENSMAMG00000007515	cnot6b	100	82.111	ENSECAG00000012704	-	99	82.111	Equus_caballus
ENSMAMG00000007515	cnot6b	100	87.657	ENSECAG00000019325	CNOT6	100	87.657	Equus_caballus
ENSMAMG00000007515	cnot6b	100	86.225	ENSEEUG00000015382	CNOT6	100	86.225	Erinaceus_europaeus
ENSMAMG00000007515	cnot6b	100	89.947	ENSELUG00000015981	cnot6b	100	89.789	Esox_lucius
ENSMAMG00000007515	cnot6b	100	87.835	ENSELUG00000024580	cnot6a	100	87.835	Esox_lucius
ENSMAMG00000007515	cnot6b	100	87.478	ENSFCAG00000001881	CNOT6	100	87.478	Felis_catus
ENSMAMG00000007515	cnot6b	100	87.835	ENSFALG00000007699	CNOT6	100	88.193	Ficedula_albicollis
ENSMAMG00000007515	cnot6b	100	85.331	ENSFDAG00000001999	CNOT6	100	85.331	Fukomys_damarensis
ENSMAMG00000007515	cnot6b	68	95.625	ENSFHEG00000013756	cnot6b	99	95.625	Fundulus_heteroclitus
ENSMAMG00000007515	cnot6b	95	95.274	ENSGMOG00000009767	cnot6b	99	95.274	Gadus_morhua
ENSMAMG00000007515	cnot6b	100	87.657	ENSGALG00000034316	CNOT6	100	88.014	Gallus_gallus
ENSMAMG00000007515	cnot6b	100	96.780	ENSGAFG00000008525	cnot6b	100	96.780	Gambusia_affinis
ENSMAMG00000007515	cnot6b	95	94.329	ENSGACG00000018046	cnot6b	99	94.329	Gasterosteus_aculeatus
ENSMAMG00000007515	cnot6b	100	72.143	ENSGAGG00000012176	CNOT6	100	72.500	Gopherus_agassizii
ENSMAMG00000007515	cnot6b	100	86.941	ENSGGOG00000003675	CNOT6	100	86.941	Gorilla_gorilla
ENSMAMG00000007515	cnot6b	100	96.959	ENSHBUG00000002819	cnot6b	100	96.959	Haplochromis_burtoni
ENSMAMG00000007515	cnot6b	100	85.689	ENSHGLG00000017756	CNOT6	100	85.689	Heterocephalus_glaber_female
ENSMAMG00000007515	cnot6b	100	85.689	ENSHGLG00100005747	CNOT6	100	85.689	Heterocephalus_glaber_male
ENSMAMG00000007515	cnot6b	100	96.243	ENSHCOG00000016176	cnot6b	100	96.243	Hippocampus_comes
ENSMAMG00000007515	cnot6b	100	90.519	ENSIPUG00000019831	cnot6a	100	90.519	Ictalurus_punctatus
ENSMAMG00000007515	cnot6b	100	90.519	ENSIPUG00000017482	cnot6b	100	90.519	Ictalurus_punctatus
ENSMAMG00000007515	cnot6b	100	86.762	ENSSTOG00000002803	CNOT6	100	86.762	Ictidomys_tridecemlineatus
ENSMAMG00000007515	cnot6b	100	86.404	ENSJJAG00000012296	Cnot6	100	86.404	Jaculus_jaculus
ENSMAMG00000007515	cnot6b	100	96.780	ENSKMAG00000004640	cnot6b	100	96.780	Kryptolebias_marmoratus
ENSMAMG00000007515	cnot6b	100	97.138	ENSLBEG00000027917	cnot6b	100	97.138	Labrus_bergylta
ENSMAMG00000007515	cnot6b	100	94.454	ENSLOCG00000010102	cnot6b	99	94.454	Lepisosteus_oculatus
ENSMAMG00000007515	cnot6b	100	87.657	ENSLAFG00000016742	CNOT6	100	87.657	Loxodonta_africana
ENSMAMG00000007515	cnot6b	100	86.941	ENSMFAG00000030867	CNOT6	100	86.941	Macaca_fascicularis
ENSMAMG00000007515	cnot6b	100	86.941	ENSMMUG00000018690	CNOT6	100	86.941	Macaca_mulatta
ENSMAMG00000007515	cnot6b	100	86.941	ENSMNEG00000038565	CNOT6	100	86.941	Macaca_nemestrina
ENSMAMG00000007515	cnot6b	100	86.941	ENSMLEG00000010555	CNOT6	100	86.941	Mandrillus_leucophaeus
ENSMAMG00000007515	cnot6b	100	96.780	ENSMZEG00005012899	cnot6b	100	96.780	Maylandia_zebra
ENSMAMG00000007515	cnot6b	100	86.225	ENSMAUG00000019798	Cnot6	100	86.225	Mesocricetus_auratus
ENSMAMG00000007515	cnot6b	100	85.152	ENSMICG00000013018	-	100	85.152	Microcebus_murinus
ENSMAMG00000007515	cnot6b	98	78.571	ENSMICG00000028378	-	99	78.571	Microcebus_murinus
ENSMAMG00000007515	cnot6b	100	86.225	ENSMOCG00000021662	Cnot6	100	86.225	Microtus_ochrogaster
ENSMAMG00000007515	cnot6b	100	94.991	ENSMMOG00000003227	cnot6b	100	94.991	Mola_mola
ENSMAMG00000007515	cnot6b	100	87.120	ENSMODG00000003979	CNOT6	100	87.478	Monodelphis_domestica
ENSMAMG00000007515	cnot6b	100	99.106	ENSMALG00000014251	cnot6b	100	99.106	Monopterus_albus
ENSMAMG00000007515	cnot6b	100	86.404	MGP_CAROLIEiJ_G0016277	Cnot6	100	86.404	Mus_caroli
ENSMAMG00000007515	cnot6b	100	86.404	ENSMUSG00000020362	Cnot6	100	86.404	Mus_musculus
ENSMAMG00000007515	cnot6b	100	86.404	MGP_PahariEiJ_G0017413	Cnot6	100	86.404	Mus_pahari
ENSMAMG00000007515	cnot6b	100	86.404	MGP_SPRETEiJ_G0017122	Cnot6	100	86.404	Mus_spretus
ENSMAMG00000007515	cnot6b	100	87.657	ENSMPUG00000000587	CNOT6	96	87.657	Mustela_putorius_furo
ENSMAMG00000007515	cnot6b	100	85.816	ENSMLUG00000010257	CNOT6	100	85.816	Myotis_lucifugus
ENSMAMG00000007515	cnot6b	100	85.510	ENSNGAG00000008269	Cnot6	100	85.689	Nannospalax_galili
ENSMAMG00000007515	cnot6b	100	96.959	ENSNBRG00000010798	cnot6b	100	96.959	Neolamprologus_brichardi
ENSMAMG00000007515	cnot6b	100	85.868	ENSNLEG00000002322	CNOT6	100	85.868	Nomascus_leucogenys
ENSMAMG00000007515	cnot6b	81	83.796	ENSMEUG00000000025	CNOT6	81	84.722	Notamacropus_eugenii
ENSMAMG00000007515	cnot6b	88	87.381	ENSOPRG00000008244	-	88	87.381	Ochotona_princeps
ENSMAMG00000007515	cnot6b	100	85.331	ENSODEG00000007041	CNOT6	100	85.331	Octodon_degus
ENSMAMG00000007515	cnot6b	75	95.981	ENSONIG00000013027	cnot6b	99	95.981	Oreochromis_niloticus
ENSMAMG00000007515	cnot6b	100	87.120	ENSOANG00000010226	CNOT6	100	87.120	Ornithorhynchus_anatinus
ENSMAMG00000007515	cnot6b	100	85.918	ENSOCUG00000011083	CNOT6	100	85.918	Oryctolagus_cuniculus
ENSMAMG00000007515	cnot6b	100	97.138	ENSORLG00000005059	cnot6b	100	97.138	Oryzias_latipes
ENSMAMG00000007515	cnot6b	100	97.138	ENSORLG00020012784	cnot6b	100	97.138	Oryzias_latipes_hni
ENSMAMG00000007515	cnot6b	94	96.750	ENSORLG00015022658	cnot6b	98	96.750	Oryzias_latipes_hsok
ENSMAMG00000007515	cnot6b	100	97.674	ENSOMEG00000005295	cnot6b	100	97.674	Oryzias_melastigma
ENSMAMG00000007515	cnot6b	94	86.122	ENSOGAG00000032470	CNOT6	100	86.122	Otolemur_garnettii
ENSMAMG00000007515	cnot6b	97	86.581	ENSOARG00000001003	CNOT6	100	86.581	Ovis_aries
ENSMAMG00000007515	cnot6b	100	86.941	ENSPPAG00000032253	CNOT6	100	86.941	Pan_paniscus
ENSMAMG00000007515	cnot6b	100	87.299	ENSPPRG00000011912	CNOT6	100	87.299	Panthera_pardus
ENSMAMG00000007515	cnot6b	100	87.299	ENSPTIG00000016794	CNOT6	100	87.299	Panthera_tigris_altaica
ENSMAMG00000007515	cnot6b	100	86.941	ENSPTRG00000017636	CNOT6	100	86.941	Pan_troglodytes
ENSMAMG00000007515	cnot6b	100	86.941	ENSPANG00000016191	CNOT6	100	86.941	Papio_anubis
ENSMAMG00000007515	cnot6b	100	91.234	ENSPKIG00000021368	cnot6b	100	91.234	Paramormyrops_kingsleyae
ENSMAMG00000007515	cnot6b	98	87.729	ENSPSIG00000017307	CNOT6	100	88.095	Pelodiscus_sinensis
ENSMAMG00000007515	cnot6b	100	97.317	ENSPMGG00000011238	cnot6b	100	97.317	Periophthalmus_magnuspinnatus
ENSMAMG00000007515	cnot6b	100	85.510	ENSPEMG00000000627	Cnot6	100	85.689	Peromyscus_maniculatus_bairdii
ENSMAMG00000007515	cnot6b	100	87.120	ENSPCIG00000020319	CNOT6	99	87.478	Phascolarctos_cinereus
ENSMAMG00000007515	cnot6b	100	97.138	ENSPFOG00000006291	cnot6b	100	97.138	Poecilia_formosa
ENSMAMG00000007515	cnot6b	100	93.023	ENSPLAG00000008266	cnot6b	100	93.023	Poecilia_latipinna
ENSMAMG00000007515	cnot6b	100	97.317	ENSPMEG00000009091	cnot6b	100	97.317	Poecilia_mexicana
ENSMAMG00000007515	cnot6b	100	95.349	ENSPREG00000003713	cnot6b	100	95.349	Poecilia_reticulata
ENSMAMG00000007515	cnot6b	100	86.941	ENSPPYG00000016137	CNOT6	100	86.941	Pongo_abelii
ENSMAMG00000007515	cnot6b	71	84.701	ENSPCAG00000005599	-	71	84.701	Procavia_capensis
ENSMAMG00000007515	cnot6b	100	81.216	ENSPCOG00000017359	CNOT6	100	81.932	Propithecus_coquereli
ENSMAMG00000007515	cnot6b	100	83.900	ENSPVAG00000003069	CNOT6	100	83.900	Pteropus_vampyrus
ENSMAMG00000007515	cnot6b	100	96.601	ENSPNYG00000000321	cnot6b	100	96.601	Pundamilia_nyererei
ENSMAMG00000007515	cnot6b	100	90.877	ENSPNAG00000028816	cnot6b	100	90.877	Pygocentrus_nattereri
ENSMAMG00000007515	cnot6b	100	91.771	ENSPNAG00000029586	cnot6a	100	91.771	Pygocentrus_nattereri
ENSMAMG00000007515	cnot6b	100	85.689	ENSRNOG00000054891	Cnot6	100	85.689	Rattus_norvegicus
ENSMAMG00000007515	cnot6b	100	86.762	ENSRBIG00000004309	CNOT6	100	86.762	Rhinopithecus_bieti
ENSMAMG00000007515	cnot6b	100	86.762	ENSRROG00000035378	CNOT6	100	86.762	Rhinopithecus_roxellana
ENSMAMG00000007515	cnot6b	100	87.120	ENSSBOG00000030494	CNOT6	100	87.120	Saimiri_boliviensis_boliviensis
ENSMAMG00000007515	cnot6b	100	87.120	ENSSHAG00000017436	CNOT6	100	87.478	Sarcophilus_harrisii
ENSMAMG00000007515	cnot6b	100	91.592	ENSSFOG00015022383	cnot6a	96	91.592	Scleropages_formosus
ENSMAMG00000007515	cnot6b	100	93.560	ENSSFOG00015015133	CNOT6	100	93.918	Scleropages_formosus
ENSMAMG00000007515	cnot6b	100	97.138	ENSSMAG00000003084	cnot6b	100	97.138	Scophthalmus_maximus
ENSMAMG00000007515	cnot6b	100	99.463	ENSSDUG00000004151	cnot6b	100	99.463	Seriola_dumerili
ENSMAMG00000007515	cnot6b	100	99.284	ENSSLDG00000004448	cnot6b	100	99.284	Seriola_lalandi_dorsalis
ENSMAMG00000007515	cnot6b	64	68.802	ENSSARG00000012650	-	100	68.802	Sorex_araneus
ENSMAMG00000007515	cnot6b	100	87.478	ENSSPUG00000007893	CNOT6	100	87.835	Sphenodon_punctatus
ENSMAMG00000007515	cnot6b	100	99.463	ENSSPAG00000000149	cnot6b	100	99.463	Stegastes_partitus
ENSMAMG00000007515	cnot6b	100	87.120	ENSSSCG00000014009	CNOT6	100	87.120	Sus_scrofa
ENSMAMG00000007515	cnot6b	100	87.478	ENSTGUG00000001119	CNOT6	100	87.835	Taeniopygia_guttata
ENSMAMG00000007515	cnot6b	100	93.918	ENSTRUG00000002818	cnot6b	100	93.918	Takifugu_rubripes
ENSMAMG00000007515	cnot6b	100	94.991	ENSTNIG00000004443	cnot6b	99	94.991	Tetraodon_nigroviridis
ENSMAMG00000007515	cnot6b	76	77.612	ENSTBEG00000017094	-	87	77.612	Tupaia_belangeri
ENSMAMG00000007515	cnot6b	100	86.941	ENSTTRG00000009363	CNOT6	100	86.941	Tursiops_truncatus
ENSMAMG00000007515	cnot6b	90	76.587	ENSUAMG00000004579	CNOT6	99	76.587	Ursus_americanus
ENSMAMG00000007515	cnot6b	100	83.106	ENSUMAG00000024577	CNOT6	100	83.106	Ursus_maritimus
ENSMAMG00000007515	cnot6b	84	91.892	ENSVPAG00000003593	CNOT6	83	91.892	Vicugna_pacos
ENSMAMG00000007515	cnot6b	100	87.299	ENSVVUG00000026940	CNOT6	100	87.299	Vulpes_vulpes
ENSMAMG00000007515	cnot6b	100	93.381	ENSXCOG00000003360	cnot6b	100	93.381	Xiphophorus_couchianus
ENSMAMG00000007515	cnot6b	100	97.317	ENSXMAG00000008730	cnot6b	100	97.317	Xiphophorus_maculatus