EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000007606 (Gene tree)
Gene ID: 113145213
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A1-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 7183 bases
Position: chrOOHQ01000094.1:1227777-1234959
Accession: 113145213
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000011225	RRM_1	PF00076.22	3.2e-36	1	2
ENSMAMP00000011225	RRM_1	PF00076.22	3.2e-36	2	2
ENSMAMP00000011215	RRM_1	PF00076.22	3.3e-36	1	2
ENSMAMP00000011215	RRM_1	PF00076.22	3.3e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000011514	-	2072	XM_026331654	ENSMAMP00000011225	340 (aa)	XP_026187439	UPI000E45892C
ENSMAMT00000011504	-	5920	-	ENSMAMP00000011215	341 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000007606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000007606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000007606	-	96	35.106	ENSMAMG00000002488	-	85	42.424
ENSMAMG00000007606	-	59	41.146	ENSMAMG00000018426	-	59	40.722
ENSMAMG00000007606	-	71	34.156	ENSMAMG00000020142	-	76	36.818
ENSMAMG00000007606	-	78	34.962	ENSMAMG00000004971	hnrnpd	69	36.444
ENSMAMG00000007606	-	52	54.802	ENSMAMG00000017728	-	77	52.885
ENSMAMG00000007606	-	76	48.450	ENSMAMG00000017754	HNRNPA0	90	54.545
ENSMAMG00000007606	-	59	40.625	ENSMAMG00000010503	msi2a	74	43.089
ENSMAMG00000007606	-	58	34.000	ENSMAMG00000009233	tardbpl	52	31.532
ENSMAMG00000007606	-	57	40.513	ENSMAMG00000002279	MSI1	57	40.196
ENSMAMG00000007606	-	54	35.519	ENSMAMG00000008021	hnrnpaba	62	34.597
ENSMAMG00000007606	-	57	82.902	ENSMAMG00000006307	HNRNPA3	66	78.605

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000007606	-	66	95.089	ENSAPOG00000019369	-	68	95.089	Acanthochromis_polyacanthus
ENSMAMG00000007606	-	52	55.056	ENSACIG00000021815	-	92	55.319	Amphilophus_citrinellus
ENSMAMG00000007606	-	66	95.089	ENSAOCG00000005289	-	67	95.089	Amphiprion_ocellaris
ENSMAMG00000007606	-	66	95.089	ENSAPEG00000004179	-	67	95.089	Amphiprion_percula
ENSMAMG00000007606	-	51	59.119	ENSATEG00000003423	-	75	59.119	Anabas_testudineus
ENSMAMG00000007606	-	95	93.902	ENSATEG00000022918	hnrnpa1a	95	93.902	Anabas_testudineus
ENSMAMG00000007606	-	54	55.495	ENSACAG00000017109	-	83	44.444	Anolis_carolinensis
ENSMAMG00000007606	-	66	92.511	ENSACLG00000006940	-	68	94.273	Astatotilapia_calliptera
ENSMAMG00000007606	-	53	63.842	ENSAMXG00000037730	-	56	62.500	Astyanax_mexicanus
ENSMAMG00000007606	-	53	55.233	ENSCSEG00000014051	-	73	53.672	Cynoglossus_semilaevis
ENSMAMG00000007606	-	91	78.730	ENSCSEG00000007589	hnrnpa1a	83	82.589	Cynoglossus_semilaevis
ENSMAMG00000007606	-	66	92.444	ENSCVAG00000012637	hnrnpa1a	66	95.067	Cyprinodon_variegatus
ENSMAMG00000007606	-	56	81.250	ENSDARG00000011020	hnrnpa1a	86	62.388	Danio_rerio
ENSMAMG00000007606	-	57	54.404	ENSDORG00000026425	-	62	44.030	Dipodomys_ordii
ENSMAMG00000007606	-	56	90.476	ENSELUG00000007372	-	54	89.119	Esox_lucius
ENSMAMG00000007606	-	54	86.957	ENSGMOG00000017950	hnrnpa1a	50	86.486	Gadus_morhua
ENSMAMG00000007606	-	54	61.111	ENSGMOG00000020353	-	94	61.326	Gadus_morhua
ENSMAMG00000007606	-	66	95.556	ENSGAFG00000007751	-	66	95.964	Gambusia_affinis
ENSMAMG00000007606	-	52	53.933	ENSGAFG00000016803	-	62	47.598	Gambusia_affinis
ENSMAMG00000007606	-	61	88.764	ENSGACG00000009435	-	87	80.970	Gasterosteus_aculeatus
ENSMAMG00000007606	-	66	92.511	ENSHBUG00000005647	hnrnpa1a	68	94.273	Haplochromis_burtoni
ENSMAMG00000007606	-	54	62.360	ENSIPUG00000001991	-	79	61.053	Ictalurus_punctatus
ENSMAMG00000007606	-	59	82.000	ENSIPUG00000002023	hnrnpa1a	76	85.000	Ictalurus_punctatus
ENSMAMG00000007606	-	58	82.653	ENSIPUG00000022440	-	75	82.857	Ictalurus_punctatus
ENSMAMG00000007606	-	53	65.746	ENSJJAG00000009178	-	89	52.716	Jaculus_jaculus
ENSMAMG00000007606	-	100	83.573	ENSKMAG00000020859	-	67	97.321	Kryptolebias_marmoratus
ENSMAMG00000007606	-	66	91.189	ENSLBEG00000010010	hnrnpa1a	65	92.070	Labrus_bergylta
ENSMAMG00000007606	-	55	71.351	ENSMFAG00000028351	-	65	65.929	Macaca_fascicularis
ENSMAMG00000007606	-	66	92.511	ENSMZEG00005027173	hnrnpa1a	68	94.273	Maylandia_zebra
ENSMAMG00000007606	-	82	76.429	ENSMMOG00000008251	hnrnpa1a	93	87.111	Mola_mola
ENSMAMG00000007606	-	52	55.367	ENSMALG00000008886	-	94	53.807	Monopterus_albus
ENSMAMG00000007606	-	66	98.206	ENSMALG00000014091	hnrnpa1a	65	98.206	Monopterus_albus
ENSMAMG00000007606	-	66	92.511	ENSNBRG00000018441	-	68	94.273	Neolamprologus_brichardi
ENSMAMG00000007606	-	53	59.091	ENSNBRG00000014469	-	84	58.333	Neolamprologus_brichardi
ENSMAMG00000007606	-	95	91.743	ENSORLG00000008001	-	95	91.743	Oryzias_latipes
ENSMAMG00000007606	-	53	51.724	ENSORLG00000029240	-	89	51.724	Oryzias_latipes
ENSMAMG00000007606	-	52	50.575	ENSORLG00020006043	-	59	50.575	Oryzias_latipes_hni
ENSMAMG00000007606	-	53	50.847	ENSORLG00020022498	-	80	51.724	Oryzias_latipes_hni
ENSMAMG00000007606	-	95	91.743	ENSORLG00020006582	hnrnpa1a	98	95.215	Oryzias_latipes_hni
ENSMAMG00000007606	-	95	92.049	ENSORLG00015022294	-	95	92.049	Oryzias_latipes_hsok
ENSMAMG00000007606	-	100	83.478	ENSOMEG00000015959	-	68	96.429	Oryzias_melastigma
ENSMAMG00000007606	-	55	93.011	ENSPMGG00000011804	hnrnpa1a	79	87.037	Periophthalmus_magnuspinnatus
ENSMAMG00000007606	-	56	55.376	ENSPMGG00000016392	-	93	55.376	Periophthalmus_magnuspinnatus
ENSMAMG00000007606	-	91	92.283	ENSPFOG00000001825	-	66	95.964	Poecilia_formosa
ENSMAMG00000007606	-	91	92.283	ENSPMEG00000002425	-	66	95.964	Poecilia_mexicana
ENSMAMG00000007606	-	53	59.091	ENSPNYG00000020729	-	92	58.333	Pundamilia_nyererei
ENSMAMG00000007606	-	51	86.184	ENSPNAG00000007752	hnrnpa1a	86	77.778	Pygocentrus_nattereri
ENSMAMG00000007606	-	91	63.438	ENSPNAG00000021630	-	57	84.492	Pygocentrus_nattereri
ENSMAMG00000007606	-	53	59.036	ENSSMAG00000010279	-	93	59.036	Scophthalmus_maximus
ENSMAMG00000007606	-	62	91.429	ENSSMAG00000004641	hnrnpa1a	90	76.161	Scophthalmus_maximus
ENSMAMG00000007606	-	52	55.114	ENSSMAG00000010246	-	86	53.886	Scophthalmus_maximus
ENSMAMG00000007606	-	90	98.953	ENSSDUG00000013908	hnrnpa1a	98	83.696	Seriola_dumerili
ENSMAMG00000007606	-	52	59.649	ENSSDUG00000002431	-	82	58.960	Seriola_dumerili
ENSMAMG00000007606	-	90	96.429	ENSSLDG00000003718	hnrnpa1a	98	98.742	Seriola_lalandi_dorsalis
ENSMAMG00000007606	-	92	84.713	ENSSPAG00000018518	-	68	93.750	Stegastes_partitus
ENSMAMG00000007606	-	65	88.889	ENSTRUG00000020491	-	69	88.938	Takifugu_rubripes
ENSMAMG00000007606	-	74	48.387	ENSTNIG00000007398	-	85	54.260	Tetraodon_nigroviridis
ENSMAMG00000007606	-	56	98.421	ENSXCOG00000009001	-	92	93.953	Xiphophorus_couchianus
ENSMAMG00000007606	-	91	93.248	ENSXMAG00000008076	-	65	96.413	Xiphophorus_maculatus