EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000007713 (Gene tree)
Gene ID: -
Gene Symbol: sf3b6
Alias: sf3b14|zgc:86708
Full Name: splicing factor 3b%2C subunit 6
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 1281 bases
Position: chrOOHQ01000069.1:7216012-7217292
Accession: ZDB-GENE-040625-36
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000011379	RRM_1	PF00076.22	3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000011675	-	333	-	ENSMAMP00000011379	110 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000007713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000007713's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000007713	sf3b6	88	96.907	ENSG00000115128	SF3B6	78	96.907	Homo_sapiens
ENSMAMG00000007713	sf3b6	88	98.969	ENSAPOG00000023788	sf3b6	78	98.969	Acanthochromis_polyacanthus
ENSMAMG00000007713	sf3b6	88	96.907	ENSAMEG00000002786	SF3B6	78	96.907	Ailuropoda_melanoleuca
ENSMAMG00000007713	sf3b6	88	98.969	ENSACIG00000012608	sf3b6	78	98.969	Amphilophus_citrinellus
ENSMAMG00000007713	sf3b6	88	98.969	ENSAOCG00000013394	sf3b6	78	98.969	Amphiprion_ocellaris
ENSMAMG00000007713	sf3b6	88	98.969	ENSAPEG00000015311	sf3b6	78	98.969	Amphiprion_percula
ENSMAMG00000007713	sf3b6	88	98.969	ENSATEG00000016569	sf3b6	78	98.969	Anabas_testudineus
ENSMAMG00000007713	sf3b6	88	96.907	ENSACAG00000011677	SF3B6	78	96.907	Anolis_carolinensis
ENSMAMG00000007713	sf3b6	88	96.907	ENSANAG00000027284	SF3B6	74	96.907	Aotus_nancymaae
ENSMAMG00000007713	sf3b6	88	100.000	ENSACLG00000007793	sf3b6	86	100.000	Astatotilapia_calliptera
ENSMAMG00000007713	sf3b6	88	96.907	ENSAMXG00000034888	sf3b6	78	96.907	Astyanax_mexicanus
ENSMAMG00000007713	sf3b6	88	94.845	ENSBTAG00000049128	-	78	94.845	Bos_taurus
ENSMAMG00000007713	sf3b6	88	96.907	ENSBTAG00000003407	SF3B6	78	96.907	Bos_taurus
ENSMAMG00000007713	sf3b6	89	71.429	WBGene00016808	C50D2.5	71	71.429	Caenorhabditis_elegans
ENSMAMG00000007713	sf3b6	88	96.907	ENSCJAG00000007716	SF3B6	78	96.907	Callithrix_jacchus
ENSMAMG00000007713	sf3b6	88	96.907	ENSCAFG00000003957	SF3B6	78	96.907	Canis_familiaris
ENSMAMG00000007713	sf3b6	90	95.960	ENSCAFG00020025576	SF3B6	78	96.907	Canis_lupus_dingo
ENSMAMG00000007713	sf3b6	88	96.907	ENSCHIG00000009902	SF3B6	78	96.907	Capra_hircus
ENSMAMG00000007713	sf3b6	88	96.907	ENSTSYG00000013978	SF3B6	78	96.907	Carlito_syrichta
ENSMAMG00000007713	sf3b6	85	92.473	ENSCAPG00000016302	SF3B6	76	92.473	Cavia_aperea
ENSMAMG00000007713	sf3b6	88	96.907	ENSCPOG00000008016	SF3B6	78	96.907	Cavia_porcellus
ENSMAMG00000007713	sf3b6	89	94.898	ENSCCAG00000018894	-	75	95.833	Cebus_capucinus
ENSMAMG00000007713	sf3b6	88	96.907	ENSCCAG00000036653	SF3B6	78	96.907	Cebus_capucinus
ENSMAMG00000007713	sf3b6	88	96.907	ENSCATG00000030936	SF3B6	78	96.907	Cercocebus_atys
ENSMAMG00000007713	sf3b6	88	96.907	ENSCLAG00000014512	SF3B6	78	96.907	Chinchilla_lanigera
ENSMAMG00000007713	sf3b6	88	96.907	ENSCSAG00000008390	SF3B6	78	96.907	Chlorocebus_sabaeus
ENSMAMG00000007713	sf3b6	99	75.229	ENSCHOG00000013886	-	92	75.229	Choloepus_hoffmanni
ENSMAMG00000007713	sf3b6	88	96.907	ENSCHOG00000000689	SF3B6	78	96.907	Choloepus_hoffmanni
ENSMAMG00000007713	sf3b6	88	96.907	ENSCPBG00000020042	SF3B6	78	96.907	Chrysemys_picta_bellii
ENSMAMG00000007713	sf3b6	87	89.583	ENSCING00000012689	-	76	89.583	Ciona_intestinalis
ENSMAMG00000007713	sf3b6	88	96.907	ENSCANG00000030559	SF3B6	78	96.907	Colobus_angolensis_palliatus
ENSMAMG00000007713	sf3b6	88	96.907	ENSCGRG00001014595	Sf3b6	78	96.907	Cricetulus_griseus_chok1gshd
ENSMAMG00000007713	sf3b6	88	96.907	ENSCGRG00000005272	Sf3b6	78	96.907	Cricetulus_griseus_crigri
ENSMAMG00000007713	sf3b6	88	97.938	ENSCSEG00000019017	sf3b6	78	97.938	Cynoglossus_semilaevis
ENSMAMG00000007713	sf3b6	88	97.938	ENSCVAG00000005055	sf3b6	78	97.938	Cyprinodon_variegatus
ENSMAMG00000007713	sf3b6	88	96.907	ENSDARG00000009753	sf3b6	78	96.907	Danio_rerio
ENSMAMG00000007713	sf3b6	88	96.907	ENSDNOG00000007148	SF3B6	78	96.907	Dasypus_novemcinctus
ENSMAMG00000007713	sf3b6	84	81.915	ENSDORG00000027390	-	76	81.915	Dipodomys_ordii
ENSMAMG00000007713	sf3b6	88	96.907	ENSDORG00000009772	Sf3b6	78	96.907	Dipodomys_ordii
ENSMAMG00000007713	sf3b6	84	81.915	ENSDORG00000029761	-	76	81.915	Dipodomys_ordii
ENSMAMG00000007713	sf3b6	82	86.667	FBgn0035692	Sf3b6	74	86.667	Drosophila_melanogaster
ENSMAMG00000007713	sf3b6	78	94.186	ENSEBUG00000004424	sf3b6	68	94.186	Eptatretus_burgeri
ENSMAMG00000007713	sf3b6	87	86.458	ENSEASG00005008061	-	87	77.064	Equus_asinus_asinus
ENSMAMG00000007713	sf3b6	88	96.907	ENSEASG00005009993	SF3B6	78	96.907	Equus_asinus_asinus
ENSMAMG00000007713	sf3b6	95	92.308	ENSECAG00000015618	SF3B6	95	92.308	Equus_caballus
ENSMAMG00000007713	sf3b6	87	87.500	ENSECAG00000027755	-	82	87.500	Equus_caballus
ENSMAMG00000007713	sf3b6	88	96.907	ENSELUG00000010379	sf3b6	78	96.907	Esox_lucius
ENSMAMG00000007713	sf3b6	88	96.907	ENSFCAG00000031365	SF3B6	78	96.907	Felis_catus
ENSMAMG00000007713	sf3b6	88	96.907	ENSFALG00000001651	SF3B6	78	96.907	Ficedula_albicollis
ENSMAMG00000007713	sf3b6	88	96.907	ENSFDAG00000007864	SF3B6	78	96.907	Fukomys_damarensis
ENSMAMG00000007713	sf3b6	88	97.938	ENSFHEG00000000685	sf3b6	78	97.938	Fundulus_heteroclitus
ENSMAMG00000007713	sf3b6	88	95.876	ENSGMOG00000005123	sf3b6	78	95.876	Gadus_morhua
ENSMAMG00000007713	sf3b6	57	96.825	ENSGALG00000016501	SF3B6	69	96.825	Gallus_gallus
ENSMAMG00000007713	sf3b6	87	100.000	ENSGAFG00000009334	sf3b6	78	98.969	Gambusia_affinis
ENSMAMG00000007713	sf3b6	88	97.938	ENSGACG00000004803	sf3b6	78	97.938	Gasterosteus_aculeatus
ENSMAMG00000007713	sf3b6	88	96.907	ENSGAGG00000012240	SF3B6	78	96.907	Gopherus_agassizii
ENSMAMG00000007713	sf3b6	88	96.907	ENSGGOG00000040806	SF3B6	78	96.907	Gorilla_gorilla
ENSMAMG00000007713	sf3b6	88	98.969	ENSHBUG00000012556	sf3b6	78	98.969	Haplochromis_burtoni
ENSMAMG00000007713	sf3b6	88	96.907	ENSHGLG00000014895	SF3B14	78	96.907	Heterocephalus_glaber_female
ENSMAMG00000007713	sf3b6	88	96.907	ENSHGLG00100008639	SF3B14	78	96.907	Heterocephalus_glaber_male
ENSMAMG00000007713	sf3b6	88	97.938	ENSHCOG00000019962	sf3b6	78	97.938	Hippocampus_comes
ENSMAMG00000007713	sf3b6	88	96.907	ENSIPUG00000023800	sf3b6	78	96.907	Ictalurus_punctatus
ENSMAMG00000007713	sf3b6	88	96.907	ENSJJAG00000021819	Sf3b6	78	96.907	Jaculus_jaculus
ENSMAMG00000007713	sf3b6	88	98.969	ENSKMAG00000004000	sf3b6	78	98.969	Kryptolebias_marmoratus
ENSMAMG00000007713	sf3b6	88	96.907	ENSLBEG00000022937	sf3b6	78	96.907	Labrus_bergylta
ENSMAMG00000007713	sf3b6	88	96.907	ENSLACG00000014326	SF3B6	78	96.907	Latimeria_chalumnae
ENSMAMG00000007713	sf3b6	88	96.907	ENSLOCG00000016481	sf3b6	78	96.907	Lepisosteus_oculatus
ENSMAMG00000007713	sf3b6	88	96.907	ENSLAFG00000029423	SF3B6	78	96.907	Loxodonta_africana
ENSMAMG00000007713	sf3b6	88	96.907	ENSMFAG00000038178	SF3B6	78	96.907	Macaca_fascicularis
ENSMAMG00000007713	sf3b6	88	96.907	ENSMMUG00000001282	SF3B6	78	96.907	Macaca_mulatta
ENSMAMG00000007713	sf3b6	88	96.907	ENSMNEG00000029050	SF3B6	78	96.907	Macaca_nemestrina
ENSMAMG00000007713	sf3b6	88	96.907	ENSMLEG00000019896	SF3B6	78	96.907	Mandrillus_leucophaeus
ENSMAMG00000007713	sf3b6	88	98.969	ENSMZEG00005003557	sf3b6	78	98.969	Maylandia_zebra
ENSMAMG00000007713	sf3b6	88	96.907	ENSMGAG00000014057	SF3B6	78	96.907	Meleagris_gallopavo
ENSMAMG00000007713	sf3b6	88	96.907	ENSMAUG00000000586	-	78	96.907	Mesocricetus_auratus
ENSMAMG00000007713	sf3b6	88	96.907	ENSMICG00000032874	SF3B6	78	96.907	Microcebus_murinus
ENSMAMG00000007713	sf3b6	88	96.907	ENSMOCG00000014338	Sf3b6	78	96.907	Microtus_ochrogaster
ENSMAMG00000007713	sf3b6	88	97.938	ENSMMOG00000015653	sf3b6	78	97.938	Mola_mola
ENSMAMG00000007713	sf3b6	78	97.674	ENSMODG00000002144	SF3B6	69	97.674	Monodelphis_domestica
ENSMAMG00000007713	sf3b6	88	97.938	ENSMALG00000019642	sf3b6	52	97.938	Monopterus_albus
ENSMAMG00000007713	sf3b6	88	96.907	MGP_CAROLIEiJ_G0017590	Sf3b6	78	96.907	Mus_caroli
ENSMAMG00000007713	sf3b6	88	96.907	ENSMUSG00000037361	Sf3b6	78	96.907	Mus_musculus
ENSMAMG00000007713	sf3b6	88	96.907	MGP_PahariEiJ_G0029348	Sf3b6	78	96.907	Mus_pahari
ENSMAMG00000007713	sf3b6	88	96.907	MGP_SPRETEiJ_G0018434	Sf3b6	78	96.907	Mus_spretus
ENSMAMG00000007713	sf3b6	88	96.907	ENSMPUG00000013957	SF3B6	78	96.907	Mustela_putorius_furo
ENSMAMG00000007713	sf3b6	88	94.845	ENSMLUG00000002473	SF3B6	78	94.845	Myotis_lucifugus
ENSMAMG00000007713	sf3b6	88	96.907	ENSNGAG00000020256	Sf3b6	78	96.907	Nannospalax_galili
ENSMAMG00000007713	sf3b6	88	98.969	ENSNBRG00000018244	sf3b6	78	98.969	Neolamprologus_brichardi
ENSMAMG00000007713	sf3b6	88	96.907	ENSNLEG00000000815	-	78	96.907	Nomascus_leucogenys
ENSMAMG00000007713	sf3b6	74	96.296	ENSODEG00000009547	SF3B6	68	96.296	Octodon_degus
ENSMAMG00000007713	sf3b6	88	98.969	ENSONIG00000001219	sf3b6	78	98.969	Oreochromis_niloticus
ENSMAMG00000007713	sf3b6	88	96.907	ENSOANG00000007627	SF3B6	78	96.907	Ornithorhynchus_anatinus
ENSMAMG00000007713	sf3b6	88	96.907	ENSOCUG00000022008	SF3B6	78	96.907	Oryctolagus_cuniculus
ENSMAMG00000007713	sf3b6	88	96.907	ENSORLG00000015955	sf3b6	78	96.907	Oryzias_latipes
ENSMAMG00000007713	sf3b6	88	96.907	ENSORLG00020005875	sf3b6	78	96.907	Oryzias_latipes_hni
ENSMAMG00000007713	sf3b6	88	96.907	ENSORLG00015001347	sf3b6	78	96.907	Oryzias_latipes_hsok
ENSMAMG00000007713	sf3b6	88	97.938	ENSOMEG00000014506	sf3b6	78	97.938	Oryzias_melastigma
ENSMAMG00000007713	sf3b6	88	96.907	ENSOGAG00000004468	SF3B6	78	96.907	Otolemur_garnettii
ENSMAMG00000007713	sf3b6	88	96.907	ENSOARG00000017819	SF3B6	78	96.907	Ovis_aries
ENSMAMG00000007713	sf3b6	88	96.907	ENSPPAG00000027816	SF3B6	78	96.907	Pan_paniscus
ENSMAMG00000007713	sf3b6	88	96.907	ENSPPRG00000023257	SF3B6	78	96.907	Panthera_pardus
ENSMAMG00000007713	sf3b6	88	96.907	ENSPTIG00000013322	SF3B6	78	96.907	Panthera_tigris_altaica
ENSMAMG00000007713	sf3b6	88	96.907	ENSPTRG00000011709	SF3B6	78	96.907	Pan_troglodytes
ENSMAMG00000007713	sf3b6	88	96.907	ENSPANG00000021963	SF3B6	78	96.907	Papio_anubis
ENSMAMG00000007713	sf3b6	91	96.000	ENSPKIG00000012311	sf3b6	85	96.000	Paramormyrops_kingsleyae
ENSMAMG00000007713	sf3b6	78	97.674	ENSPSIG00000017115	SF3B6	75	97.674	Pelodiscus_sinensis
ENSMAMG00000007713	sf3b6	95	91.346	ENSPMGG00000014621	sf3b6	87	91.346	Periophthalmus_magnuspinnatus
ENSMAMG00000007713	sf3b6	88	96.907	ENSPEMG00000010308	Sf3b6	78	96.907	Peromyscus_maniculatus_bairdii
ENSMAMG00000007713	sf3b6	81	91.011	ENSPMAG00000006008	sf3b6	71	91.011	Petromyzon_marinus
ENSMAMG00000007713	sf3b6	88	75.258	ENSPCIG00000015858	-	78	75.258	Phascolarctos_cinereus
ENSMAMG00000007713	sf3b6	88	96.907	ENSPCIG00000022128	-	78	96.907	Phascolarctos_cinereus
ENSMAMG00000007713	sf3b6	88	98.969	ENSPFOG00000012494	sf3b6	78	98.969	Poecilia_formosa
ENSMAMG00000007713	sf3b6	87	100.000	ENSPLAG00000020460	sf3b6	77	100.000	Poecilia_latipinna
ENSMAMG00000007713	sf3b6	87	100.000	ENSPMEG00000004426	sf3b6	77	100.000	Poecilia_mexicana
ENSMAMG00000007713	sf3b6	88	96.907	ENSPPYG00000012603	SF3B6	78	96.907	Pongo_abelii
ENSMAMG00000007713	sf3b6	88	96.907	ENSPVAG00000011346	SF3B6	78	96.907	Pteropus_vampyrus
ENSMAMG00000007713	sf3b6	88	98.969	ENSPNYG00000021832	sf3b6	78	98.969	Pundamilia_nyererei
ENSMAMG00000007713	sf3b6	92	95.050	ENSPNAG00000008845	sf3b6	93	95.050	Pygocentrus_nattereri
ENSMAMG00000007713	sf3b6	84	81.522	ENSRNOG00000046172	Sf3b6	73	81.522	Rattus_norvegicus
ENSMAMG00000007713	sf3b6	88	96.907	ENSRBIG00000039598	SF3B6	78	96.907	Rhinopithecus_bieti
ENSMAMG00000007713	sf3b6	88	96.907	ENSRROG00000011368	SF3B6	78	96.907	Rhinopithecus_roxellana
ENSMAMG00000007713	sf3b6	88	96.907	ENSSBOG00000002914	SF3B6	78	96.907	Saimiri_boliviensis_boliviensis
ENSMAMG00000007713	sf3b6	88	96.907	ENSSFOG00015014370	sf3b6	78	96.907	Scleropages_formosus
ENSMAMG00000007713	sf3b6	88	96.907	ENSSMAG00000004566	sf3b6	78	96.907	Scophthalmus_maximus
ENSMAMG00000007713	sf3b6	88	98.969	ENSSDUG00000006538	sf3b6	78	98.969	Seriola_dumerili
ENSMAMG00000007713	sf3b6	88	98.969	ENSSLDG00000004494	sf3b6	78	98.969	Seriola_lalandi_dorsalis
ENSMAMG00000007713	sf3b6	88	96.907	ENSSARG00000011902	-	78	96.907	Sorex_araneus
ENSMAMG00000007713	sf3b6	88	96.907	ENSSPUG00000014919	SF3B6	78	96.907	Sphenodon_punctatus
ENSMAMG00000007713	sf3b6	88	98.969	ENSSPAG00000013201	sf3b6	78	98.969	Stegastes_partitus
ENSMAMG00000007713	sf3b6	88	96.907	ENSSSCG00000008587	SF3B6	78	96.907	Sus_scrofa
ENSMAMG00000007713	sf3b6	88	96.907	ENSTGUG00000013191	SF3B6	78	96.907	Taeniopygia_guttata
ENSMAMG00000007713	sf3b6	88	98.969	ENSTRUG00000025286	sf3b6	78	98.969	Takifugu_rubripes
ENSMAMG00000007713	sf3b6	88	98.969	ENSTNIG00000009719	sf3b6	78	98.969	Tetraodon_nigroviridis
ENSMAMG00000007713	sf3b6	78	97.674	ENSTBEG00000012532	SF3B6	75	97.674	Tupaia_belangeri
ENSMAMG00000007713	sf3b6	78	97.674	ENSTTRG00000013430	SF3B6	75	97.674	Tursiops_truncatus
ENSMAMG00000007713	sf3b6	88	96.907	ENSUAMG00000025329	SF3B6	78	96.907	Ursus_americanus
ENSMAMG00000007713	sf3b6	86	77.895	ENSUAMG00000000978	-	75	77.895	Ursus_americanus
ENSMAMG00000007713	sf3b6	88	96.907	ENSUMAG00000022835	SF3B6	78	96.907	Ursus_maritimus
ENSMAMG00000007713	sf3b6	78	97.674	ENSVPAG00000005546	SF3B6	75	97.674	Vicugna_pacos
ENSMAMG00000007713	sf3b6	88	96.907	ENSVVUG00000010874	SF3B6	78	96.907	Vulpes_vulpes
ENSMAMG00000007713	sf3b6	88	95.876	ENSXETG00000018204	sf3b6	78	95.876	Xenopus_tropicalis
ENSMAMG00000007713	sf3b6	88	100.000	ENSXCOG00000008477	sf3b6	75	100.000	Xiphophorus_couchianus
ENSMAMG00000007713	sf3b6	87	100.000	ENSXMAG00000010747	sf3b6	89	100.000	Xiphophorus_maculatus