EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000007715 (Gene tree)
Gene ID: 113125961
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 4023 bases
Position: chrOOHQ01000103.1:18175208-18179230
Accession: 113125961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000011381	GTP_EFTU	PF00009.27	1.6e-53	1	1
ENSMAMP00000011381	GTP_EFTU_D2	PF03144.25	7.8e-14	1	1
ENSMAMP00000011381	GTP_EFTU_D3	PF03143.17	3.9e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000011677	-	2235	-	ENSMAMP00000011381	461 (aa)	XP_026155434	UPI000E465ACE

Gene Model

Click here to download ENSMAMG00000007715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000007715's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000007715	-	95	38.497	ENSMAMG00000002821	gspt1l	73	38.497
ENSMAMG00000007715	-	95	42.334	ENSMAMG00000016498	hbs1l	68	42.334
ENSMAMG00000007715	-	90	87.681	ENSMAMG00000004552	eef1a1b	98	88.119
ENSMAMG00000007715	-	96	38.288	ENSMAMG00000004326	GSPT1	73	38.375
ENSMAMG00000007715	-	100	88.312	ENSMAMG00000022124	EEF1A1	98	88.938
ENSMAMG00000007715	-	100	90.476	ENSMAMG00000007730	-	97	91.295
ENSMAMG00000007715	-	96	30.464	ENSMAMG00000002053	tufm	87	30.464
ENSMAMG00000007715	-	100	63.124	ENSMAMG00000009907	si:dkey-37o8.1	92	64.932

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000007715	-	100	94.577	ENSAPOG00000004714	-	100	94.577	Acanthochromis_polyacanthus
ENSMAMG00000007715	-	90	95.884	ENSACIG00000001219	-	97	96.030	Amphilophus_citrinellus
ENSMAMG00000007715	-	90	96.368	ENSAOCG00000022002	-	100	96.368	Amphiprion_ocellaris
ENSMAMG00000007715	-	100	91.106	ENSAOCG00000022039	-	98	91.574	Amphiprion_ocellaris
ENSMAMG00000007715	-	100	91.757	ENSAPEG00000016361	-	98	92.239	Amphiprion_percula
ENSMAMG00000007715	-	100	97.614	ENSATEG00000003244	-	97	97.614	Anabas_testudineus
ENSMAMG00000007715	-	100	95.662	ENSACLG00000022560	-	98	95.787	Astatotilapia_calliptera
ENSMAMG00000007715	-	100	83.117	WBGene00001168	eef-1A.1	98	83.628	Caenorhabditis_elegans
ENSMAMG00000007715	-	100	83.117	WBGene00001169	eef-1A.2	98	83.628	Caenorhabditis_elegans
ENSMAMG00000007715	-	98	81.319	ENSCING00000005126	-	98	81.319	Ciona_intestinalis
ENSMAMG00000007715	-	100	78.755	ENSCING00000007703	-	97	78.947	Ciona_intestinalis
ENSMAMG00000007715	-	98	81.498	ENSCING00000018894	-	97	81.498	Ciona_intestinalis
ENSMAMG00000007715	-	99	84.934	ENSCING00000021478	-	98	85.523	Ciona_intestinalis
ENSMAMG00000007715	-	99	76.471	ENSCSAVG00000001085	-	89	77.578	Ciona_savignyi
ENSMAMG00000007715	-	99	84.683	ENSCSAVG00000006357	-	96	94.000	Ciona_savignyi
ENSMAMG00000007715	-	98	81.264	ENSCSAVG00000003196	-	98	81.264	Ciona_savignyi
ENSMAMG00000007715	-	98	82.418	ENSCSAVG00000009663	-	98	82.418	Ciona_savignyi
ENSMAMG00000007715	-	98	94.900	ENSCSEG00000008011	-	98	94.900	Cynoglossus_semilaevis
ENSMAMG00000007715	-	89	85.194	ENSCSEG00000007992	-	97	85.360	Cynoglossus_semilaevis
ENSMAMG00000007715	-	90	86.715	ENSCSEG00000007972	-	98	87.129	Cynoglossus_semilaevis
ENSMAMG00000007715	-	100	98.048	ENSCVAG00000019356	-	100	98.048	Cyprinodon_variegatus
ENSMAMG00000007715	-	100	86.147	FBgn0284245	eEF1alpha1	97	86.607	Drosophila_melanogaster
ENSMAMG00000007715	-	98	85.398	FBgn0000557	eEF1alpha2	98	85.398	Drosophila_melanogaster
ENSMAMG00000007715	-	99	82.826	ENSEBUG00000015814	-	98	83.370	Eptatretus_burgeri
ENSMAMG00000007715	-	100	97.614	ENSFHEG00000015054	-	100	97.614	Fundulus_heteroclitus
ENSMAMG00000007715	-	100	96.963	ENSGAFG00000014646	-	100	96.963	Gambusia_affinis
ENSMAMG00000007715	-	98	95.344	ENSGACG00000002182	-	98	95.344	Gasterosteus_aculeatus
ENSMAMG00000007715	-	100	92.625	ENSGACG00000002143	-	98	92.905	Gasterosteus_aculeatus
ENSMAMG00000007715	-	55	93.281	ENSHBUG00000017166	-	91	93.416	Haplochromis_burtoni
ENSMAMG00000007715	-	98	95.787	ENSHCOG00000008468	-	98	95.787	Hippocampus_comes
ENSMAMG00000007715	-	99	85.900	ENSHCOG00000008489	-	97	86.161	Hippocampus_comes
ENSMAMG00000007715	-	98	94.900	ENSLBEG00000002759	-	98	94.900	Labrus_bergylta
ENSMAMG00000007715	-	99	85.652	ENSLBEG00000002955	-	98	85.809	Labrus_bergylta
ENSMAMG00000007715	-	99	86.957	ENSMMOG00000001106	-	98	87.361	Mola_mola
ENSMAMG00000007715	-	98	93.570	ENSMMOG00000001165	-	100	95.455	Mola_mola
ENSMAMG00000007715	-	99	77.193	ENSMMOG00000018160	-	95	86.957	Mola_mola
ENSMAMG00000007715	-	100	85.033	ENSNBRG00000017346	-	97	84.922	Neolamprologus_brichardi
ENSMAMG00000007715	-	76	93.182	ENSONIG00000017760	-	98	93.182	Oreochromis_niloticus
ENSMAMG00000007715	-	100	97.180	ENSORLG00000007614	eef1a	100	97.180	Oryzias_latipes
ENSMAMG00000007715	-	100	97.180	ENSORLG00015002397	-	100	97.180	Oryzias_latipes_hsok
ENSMAMG00000007715	-	100	98.265	ENSOMEG00000018226	-	100	98.265	Oryzias_melastigma
ENSMAMG00000007715	-	98	95.575	ENSPMGG00000023911	-	100	98.837	Periophthalmus_magnuspinnatus
ENSMAMG00000007715	-	95	49.431	ENSPMGG00000022427	-	97	60.000	Periophthalmus_magnuspinnatus
ENSMAMG00000007715	-	100	97.180	ENSPFOG00000003924	-	100	96.852	Poecilia_formosa
ENSMAMG00000007715	-	100	97.180	ENSPLAG00000004316	-	100	97.180	Poecilia_latipinna
ENSMAMG00000007715	-	100	97.397	ENSPMEG00000001010	-	100	97.397	Poecilia_mexicana
ENSMAMG00000007715	-	100	96.963	ENSPREG00000008243	-	100	96.963	Poecilia_reticulata
ENSMAMG00000007715	-	100	95.662	ENSPNYG00000007263	-	98	95.787	Pundamilia_nyererei
ENSMAMG00000007715	-	97	80.449	YBR118W	TEF2	98	79.823	Saccharomyces_cerevisiae
ENSMAMG00000007715	-	97	80.449	YPR080W	TEF1	98	79.823	Saccharomyces_cerevisiae
ENSMAMG00000007715	-	53	92.213	ENSSMAG00000016277	-	96	92.213	Scophthalmus_maximus
ENSMAMG00000007715	-	98	83.087	ENSSMAG00000018469	-	98	83.087	Scophthalmus_maximus
ENSMAMG00000007715	-	100	96.529	ENSSDUG00000008198	-	100	96.529	Seriola_dumerili
ENSMAMG00000007715	-	98	93.570	ENSSPAG00000001710	-	98	93.570	Stegastes_partitus
ENSMAMG00000007715	-	99	87.391	ENSTRUG00000005066	-	98	87.805	Takifugu_rubripes
ENSMAMG00000007715	-	98	95.565	ENSTRUG00000005727	ef-1a	98	95.565	Takifugu_rubripes
ENSMAMG00000007715	-	99	83.043	ENSTNIG00000002617	-	94	84.855	Tetraodon_nigroviridis
ENSMAMG00000007715	-	100	96.529	ENSTNIG00000002619	-	100	96.529	Tetraodon_nigroviridis
ENSMAMG00000007715	-	100	97.180	ENSXCOG00000001542	-	100	100.000	Xiphophorus_couchianus