EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000007761 (Gene tree)
Gene ID: 113124865
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein D3 polypeptide
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 11207 bases
Position: chrOOHQ01000096.1:10241553-10252759
Accession: 113124643
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000011489	LSM	PF01423.22	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000011784	-	6401	-	ENSMAMP00000011482	463 (aa)	XP_026153795	UPI000E4550E8
ENSMAMT00000011774	-	1170	-	ENSMAMP00000011472	389 (aa)	-	-
ENSMAMT00000011791	-	1312	-	ENSMAMP00000011489	127 (aa)	XP_026153459	UPI00022B11E8

Gene Model

Click here to download ENSMAMG00000007761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000007761's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000007761	-	65	31.325	ENSMAMG00000012971	snrpd1	84	30.769
ENSMAMG00000007761	-	97	31.111	ENSMAMG00000006190	lsm4	76	34.259

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000007761	-	100	100.000	ENSCSEG00000003550	-	100	100.000	Cynoglossus_semilaevis