EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000007851 (Gene tree)
Gene ID: 113138434
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 12605 bases
Position: chrOOHQ01000039.1:8210118-8222722
Accession: 113138434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000011609	ResIII	PF04851.15	1.4e-26	1	2
ENSMAMP00000011609	ResIII	PF04851.15	1.4e-26	2	2
ENSMAMP00000011645	ResIII	PF04851.15	1.5e-26	1	2
ENSMAMP00000011645	ResIII	PF04851.15	1.5e-26	2	2
ENSMAMP00000011708	ResIII	PF04851.15	1.3e-16	1	1
ENSMAMP00000011609	DEAD	PF00270.29	8.1e-54	1	2
ENSMAMP00000011609	DEAD	PF00270.29	8.1e-54	2	2
ENSMAMP00000011645	DEAD	PF00270.29	8.1e-54	1	2
ENSMAMP00000011645	DEAD	PF00270.29	8.1e-54	2	2
ENSMAMP00000011708	DEAD	PF00270.29	7.5e-37	1	2
ENSMAMP00000011708	DEAD	PF00270.29	7.5e-37	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000011958	-	6684	-	ENSMAMP00000011645	2144 (aa)	-	-
ENSMAMT00000012022	-	6204	-	ENSMAMP00000011708	2067 (aa)	-	-
ENSMAMT00000011919	-	6663	XM_026320865	ENSMAMP00000011609	2137 (aa)	XP_026176650	UPI000E458711

Gene Model

Click here to download ENSMAMG00000007851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000007851's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000007851	snrnp200	81	45.536	ENSMAMG00000005917	ascc3	81	45.592
ENSMAMG00000007851	snrnp200	69	31.099	ENSMAMG00000004623	hfm1	88	31.099

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000007851	snrnp200	99	90.173	ENSG00000144028	SNRNP200	100	90.220	Homo_sapiens
ENSMAMG00000007851	snrnp200	100	97.660	ENSAPOG00000010223	snrnp200	100	97.660	Acanthochromis_polyacanthus
ENSMAMG00000007851	snrnp200	99	90.220	ENSAMEG00000008996	SNRNP200	100	90.267	Ailuropoda_melanoleuca
ENSMAMG00000007851	snrnp200	97	97.108	ENSACIG00000001764	snrnp200	98	97.108	Amphilophus_citrinellus
ENSMAMG00000007851	snrnp200	100	97.520	ENSAOCG00000024593	snrnp200	100	97.520	Amphiprion_ocellaris
ENSMAMG00000007851	snrnp200	97	96.786	ENSAPEG00000012554	snrnp200	100	96.786	Amphiprion_percula
ENSMAMG00000007851	snrnp200	100	97.567	ENSATEG00000022522	snrnp200	100	97.567	Anabas_testudineus
ENSMAMG00000007851	snrnp200	99	90.245	ENSAPLG00000004313	SNRNP200	100	90.292	Anas_platyrhynchos
ENSMAMG00000007851	snrnp200	99	89.412	ENSACAG00000000434	SNRNP200	100	89.471	Anolis_carolinensis
ENSMAMG00000007851	snrnp200	99	87.442	ENSANAG00000036625	SNRNP200	100	87.488	Aotus_nancymaae
ENSMAMG00000007851	snrnp200	100	97.099	ENSACLG00000011188	snrnp200	100	97.099	Astatotilapia_calliptera
ENSMAMG00000007851	snrnp200	99	94.502	ENSAMXG00000005684	snrnp200	100	94.478	Astyanax_mexicanus
ENSMAMG00000007851	snrnp200	99	89.892	ENSBTAG00000000848	SNRNP200	100	89.939	Bos_taurus
ENSMAMG00000007851	snrnp200	99	90.126	ENSCJAG00000007514	SNRNP200	100	90.173	Callithrix_jacchus
ENSMAMG00000007851	snrnp200	99	89.459	ENSCAFG00020019979	SNRNP200	100	91.599	Canis_lupus_dingo
ENSMAMG00000007851	snrnp200	99	89.939	ENSCHIG00000020611	SNRNP200	100	89.986	Capra_hircus
ENSMAMG00000007851	snrnp200	99	90.220	ENSTSYG00000010467	SNRNP200	100	90.267	Carlito_syrichta
ENSMAMG00000007851	snrnp200	99	89.709	ENSCAPG00000017234	SNRNP200	99	89.756	Cavia_aperea
ENSMAMG00000007851	snrnp200	99	90.033	ENSCPOG00000006776	SNRNP200	100	90.080	Cavia_porcellus
ENSMAMG00000007851	snrnp200	99	90.126	ENSCCAG00000033962	SNRNP200	100	90.173	Cebus_capucinus
ENSMAMG00000007851	snrnp200	99	90.173	ENSCATG00000015790	SNRNP200	100	90.220	Cercocebus_atys
ENSMAMG00000007851	snrnp200	99	90.080	ENSCLAG00000004116	SNRNP200	100	90.126	Chinchilla_lanigera
ENSMAMG00000007851	snrnp200	99	90.173	ENSCSAG00000017369	SNRNP200	100	90.220	Chlorocebus_sabaeus
ENSMAMG00000007851	snrnp200	75	92.216	ENSCHOG00000012981	-	58	92.216	Choloepus_hoffmanni
ENSMAMG00000007851	snrnp200	99	90.000	ENSCPBG00000022571	SNRNP200	100	90.047	Chrysemys_picta_bellii
ENSMAMG00000007851	snrnp200	99	75.700	ENSCING00000005082	-	99	75.840	Ciona_intestinalis
ENSMAMG00000007851	snrnp200	94	89.950	ENSCANG00000033932	SNRNP200	100	90.000	Colobus_angolensis_palliatus
ENSMAMG00000007851	snrnp200	99	90.173	ENSCGRG00001022610	Snrnp200	100	90.220	Cricetulus_griseus_chok1gshd
ENSMAMG00000007851	snrnp200	99	89.673	ENSCGRG00000016472	Snrnp200	100	89.720	Cricetulus_griseus_crigri
ENSMAMG00000007851	snrnp200	99	95.831	ENSCSEG00000016399	snrnp200	100	95.831	Cynoglossus_semilaevis
ENSMAMG00000007851	snrnp200	100	91.703	ENSCVAG00000017631	snrnp200	100	91.847	Cyprinodon_variegatus
ENSMAMG00000007851	snrnp200	100	93.917	ENSDARG00000077536	snrnp200	100	93.964	Danio_rerio
ENSMAMG00000007851	snrnp200	99	88.863	ENSDNOG00000011227	SNRNP200	100	88.910	Dasypus_novemcinctus
ENSMAMG00000007851	snrnp200	99	87.763	ENSDORG00000005861	Snrnp200	100	87.809	Dipodomys_ordii
ENSMAMG00000007851	snrnp200	100	73.709	FBgn0263599	l(3)72Ab	100	73.709	Drosophila_melanogaster
ENSMAMG00000007851	snrnp200	95	89.157	ENSETEG00000000162	SNRNP200	74	89.415	Echinops_telfairi
ENSMAMG00000007851	snrnp200	83	80.538	ENSEBUG00000016524	snrnp200	95	80.538	Eptatretus_burgeri
ENSMAMG00000007851	snrnp200	99	89.236	ENSEASG00005001884	SNRNP200	100	89.189	Equus_asinus_asinus
ENSMAMG00000007851	snrnp200	99	90.220	ENSECAG00000019675	SNRNP200	100	90.267	Equus_caballus
ENSMAMG00000007851	snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSMAMG00000007851	snrnp200	99	95.397	ENSELUG00000018948	snrnp200	100	95.370	Esox_lucius
ENSMAMG00000007851	snrnp200	99	90.267	ENSFCAG00000010699	SNRNP200	100	90.314	Felis_catus
ENSMAMG00000007851	snrnp200	93	84.913	ENSFALG00000001368	-	95	84.913	Ficedula_albicollis
ENSMAMG00000007851	snrnp200	99	90.033	ENSFDAG00000004683	SNRNP200	100	90.080	Fukomys_damarensis
ENSMAMG00000007851	snrnp200	100	94.293	ENSFHEG00000003786	snrnp200	100	94.436	Fundulus_heteroclitus
ENSMAMG00000007851	snrnp200	100	94.115	ENSGMOG00000004881	snrnp200	99	94.115	Gadus_morhua
ENSMAMG00000007851	snrnp200	100	94.436	ENSGAFG00000010807	snrnp200	100	94.580	Gambusia_affinis
ENSMAMG00000007851	snrnp200	100	96.592	ENSGACG00000011474	snrnp200	99	96.592	Gasterosteus_aculeatus
ENSMAMG00000007851	snrnp200	95	91.968	ENSGAGG00000016069	SNRNP200	98	98.387	Gopherus_agassizii
ENSMAMG00000007851	snrnp200	99	90.173	ENSGGOG00000005174	SNRNP200	100	90.220	Gorilla_gorilla
ENSMAMG00000007851	snrnp200	97	94.394	ENSHBUG00000011322	snrnp200	99	94.444	Haplochromis_burtoni
ENSMAMG00000007851	snrnp200	99	90.033	ENSHGLG00000006654	SNRNP200	100	90.080	Heterocephalus_glaber_female
ENSMAMG00000007851	snrnp200	99	90.033	ENSHGLG00100018594	SNRNP200	100	90.080	Heterocephalus_glaber_male
ENSMAMG00000007851	snrnp200	99	90.173	ENSSTOG00000016351	SNRNP200	100	90.220	Ictidomys_tridecemlineatus
ENSMAMG00000007851	snrnp200	99	89.939	ENSJJAG00000023659	Snrnp200	100	89.986	Jaculus_jaculus
ENSMAMG00000007851	snrnp200	100	94.694	ENSKMAG00000003665	snrnp200	100	94.694	Kryptolebias_marmoratus
ENSMAMG00000007851	snrnp200	100	96.958	ENSLBEG00000021585	snrnp200	100	96.958	Labrus_bergylta
ENSMAMG00000007851	snrnp200	82	92.550	ENSLACG00000000226	SNRNP200	100	92.550	Latimeria_chalumnae
ENSMAMG00000007851	snrnp200	100	93.502	ENSLOCG00000015198	snrnp200	100	93.548	Lepisosteus_oculatus
ENSMAMG00000007851	snrnp200	99	90.033	ENSLAFG00000015626	SNRNP200	100	90.080	Loxodonta_africana
ENSMAMG00000007851	snrnp200	99	90.126	ENSMFAG00000040174	SNRNP200	99	92.442	Macaca_fascicularis
ENSMAMG00000007851	snrnp200	99	90.126	ENSMMUG00000023261	SNRNP200	100	90.173	Macaca_mulatta
ENSMAMG00000007851	snrnp200	99	90.080	ENSMNEG00000032398	SNRNP200	100	90.126	Macaca_nemestrina
ENSMAMG00000007851	snrnp200	99	90.173	ENSMLEG00000019083	SNRNP200	99	92.442	Mandrillus_leucophaeus
ENSMAMG00000007851	snrnp200	97	94.394	ENSMZEG00005010787	snrnp200	99	94.444	Maylandia_zebra
ENSMAMG00000007851	snrnp200	97	89.942	ENSMGAG00000001831	SNRNP200	99	89.995	Meleagris_gallopavo
ENSMAMG00000007851	snrnp200	99	90.220	ENSMAUG00000011825	Snrnp200	100	90.267	Mesocricetus_auratus
ENSMAMG00000007851	snrnp200	99	90.220	ENSMICG00000004710	SNRNP200	100	90.267	Microcebus_murinus
ENSMAMG00000007851	snrnp200	99	88.489	ENSMOCG00000011814	Snrnp200	100	88.489	Microtus_ochrogaster
ENSMAMG00000007851	snrnp200	99	95.019	ENSMMOG00000014167	snrnp200	100	95.087	Mola_mola
ENSMAMG00000007851	snrnp200	99	90.126	ENSMODG00000008475	SNRNP200	100	90.173	Monodelphis_domestica
ENSMAMG00000007851	snrnp200	100	97.426	ENSMALG00000001973	snrnp200	100	97.426	Monopterus_albus
ENSMAMG00000007851	snrnp200	99	90.080	MGP_CAROLIEiJ_G0024250	Snrnp200	100	90.126	Mus_caroli
ENSMAMG00000007851	snrnp200	99	90.126	ENSMUSG00000003660	Snrnp200	100	90.173	Mus_musculus
ENSMAMG00000007851	snrnp200	99	90.126	MGP_PahariEiJ_G0025695	Snrnp200	100	90.173	Mus_pahari
ENSMAMG00000007851	snrnp200	99	90.126	MGP_SPRETEiJ_G0025170	Snrnp200	100	91.436	Mus_spretus
ENSMAMG00000007851	snrnp200	99	90.267	ENSMPUG00000008949	SNRNP200	100	90.314	Mustela_putorius_furo
ENSMAMG00000007851	snrnp200	99	86.898	ENSMLUG00000027511	-	100	86.944	Myotis_lucifugus
ENSMAMG00000007851	snrnp200	99	89.720	ENSMLUG00000010493	SNRNP200	100	89.766	Myotis_lucifugus
ENSMAMG00000007851	snrnp200	99	90.173	ENSNGAG00000021993	Snrnp200	100	90.220	Nannospalax_galili
ENSMAMG00000007851	snrnp200	90	97.216	ENSNBRG00000017960	snrnp200	98	97.216	Neolamprologus_brichardi
ENSMAMG00000007851	snrnp200	99	85.920	ENSNLEG00000000025	SNRNP200	100	86.059	Nomascus_leucogenys
ENSMAMG00000007851	snrnp200	99	98.039	ENSMEUG00000010532	SNRNP200	79	89.524	Notamacropus_eugenii
ENSMAMG00000007851	snrnp200	96	89.013	ENSOPRG00000015464	SNRNP200	96	89.072	Ochotona_princeps
ENSMAMG00000007851	snrnp200	99	90.033	ENSODEG00000008366	SNRNP200	100	90.080	Octodon_degus
ENSMAMG00000007851	snrnp200	100	97.052	ENSONIG00000010714	snrnp200	100	97.052	Oreochromis_niloticus
ENSMAMG00000007851	snrnp200	99	90.126	ENSOCUG00000009864	SNRNP200	100	90.173	Oryctolagus_cuniculus
ENSMAMG00000007851	snrnp200	99	95.597	ENSORLG00000012286	snrnp200	100	95.614	Oryzias_latipes
ENSMAMG00000007851	snrnp200	99	95.691	ENSORLG00020004648	snrnp200	100	95.691	Oryzias_latipes_hni
ENSMAMG00000007851	snrnp200	99	95.738	ENSORLG00015019114	snrnp200	100	95.835	Oryzias_latipes_hsok
ENSMAMG00000007851	snrnp200	99	96.147	ENSOMEG00000011834	snrnp200	100	96.069	Oryzias_melastigma
ENSMAMG00000007851	snrnp200	99	90.220	ENSOGAG00000006879	SNRNP200	100	90.267	Otolemur_garnettii
ENSMAMG00000007851	snrnp200	99	89.289	ENSOARG00000013949	SNRNP200	100	89.336	Ovis_aries
ENSMAMG00000007851	snrnp200	99	90.173	ENSPPAG00000041559	SNRNP200	100	90.220	Pan_paniscus
ENSMAMG00000007851	snrnp200	99	90.267	ENSPPRG00000004435	SNRNP200	100	90.314	Panthera_pardus
ENSMAMG00000007851	snrnp200	99	89.846	ENSPTIG00000006380	SNRNP200	100	89.892	Panthera_tigris_altaica
ENSMAMG00000007851	snrnp200	99	90.173	ENSPTRG00000012230	SNRNP200	100	90.220	Pan_troglodytes
ENSMAMG00000007851	snrnp200	99	90.126	ENSPANG00000006017	SNRNP200	100	90.173	Papio_anubis
ENSMAMG00000007851	snrnp200	100	94.387	ENSPKIG00000014762	snrnp200	100	94.453	Paramormyrops_kingsleyae
ENSMAMG00000007851	snrnp200	99	89.149	ENSPSIG00000008580	SNRNP200	100	89.196	Pelodiscus_sinensis
ENSMAMG00000007851	snrnp200	99	90.033	ENSPCIG00000023050	SNRNP200	100	90.080	Phascolarctos_cinereus
ENSMAMG00000007851	snrnp200	100	96.071	ENSPFOG00000015110	snrnp200	100	96.118	Poecilia_formosa
ENSMAMG00000007851	snrnp200	97	96.152	ENSPLAG00000006711	snrnp200	99	96.207	Poecilia_latipinna
ENSMAMG00000007851	snrnp200	97	96.097	ENSPMEG00000021166	snrnp200	99	96.152	Poecilia_mexicana
ENSMAMG00000007851	snrnp200	100	96.256	ENSPREG00000008875	snrnp200	100	96.303	Poecilia_reticulata
ENSMAMG00000007851	snrnp200	99	90.173	ENSPPYG00000012068	SNRNP200	100	90.220	Pongo_abelii
ENSMAMG00000007851	snrnp200	96	94.872	ENSPCAG00000008536	SNRNP200	86	97.872	Procavia_capensis
ENSMAMG00000007851	snrnp200	99	90.173	ENSPCOG00000024608	SNRNP200	100	90.220	Propithecus_coquereli
ENSMAMG00000007851	snrnp200	96	90.788	ENSPVAG00000005860	SNRNP200	92	90.788	Pteropus_vampyrus
ENSMAMG00000007851	snrnp200	100	92.301	ENSPNYG00000017476	snrnp200	100	93.021	Pundamilia_nyererei
ENSMAMG00000007851	snrnp200	100	91.035	ENSPNAG00000010998	snrnp200	100	91.131	Pygocentrus_nattereri
ENSMAMG00000007851	snrnp200	99	90.220	ENSRNOG00000012157	Snrnp200	100	90.267	Rattus_norvegicus
ENSMAMG00000007851	snrnp200	99	90.173	ENSRBIG00000044690	-	100	90.220	Rhinopithecus_bieti
ENSMAMG00000007851	snrnp200	99	90.173	ENSRROG00000037952	-	100	90.220	Rhinopithecus_roxellana
ENSMAMG00000007851	snrnp200	99	90.126	ENSSBOG00000035471	SNRNP200	100	90.173	Saimiri_boliviensis_boliviensis
ENSMAMG00000007851	snrnp200	97	89.845	ENSSHAG00000000758	SNRNP200	99	89.898	Sarcophilus_harrisii
ENSMAMG00000007851	snrnp200	99	94.927	ENSSFOG00015018826	snrnp200	100	94.902	Scleropages_formosus
ENSMAMG00000007851	snrnp200	100	97.099	ENSSMAG00000005463	snrnp200	100	97.099	Scophthalmus_maximus
ENSMAMG00000007851	snrnp200	100	97.894	ENSSDUG00000021410	snrnp200	100	97.894	Seriola_dumerili
ENSMAMG00000007851	snrnp200	100	97.707	ENSSLDG00000010884	snrnp200	100	97.707	Seriola_lalandi_dorsalis
ENSMAMG00000007851	snrnp200	95	87.547	ENSSARG00000010728	SNRNP200	96	87.547	Sorex_araneus
ENSMAMG00000007851	snrnp200	99	90.360	ENSSPUG00000003726	-	100	90.407	Sphenodon_punctatus
ENSMAMG00000007851	snrnp200	100	97.754	ENSSPAG00000001842	snrnp200	100	97.754	Stegastes_partitus
ENSMAMG00000007851	snrnp200	99	90.314	ENSSSCG00000008127	SNRNP200	100	90.360	Sus_scrofa
ENSMAMG00000007851	snrnp200	99	82.025	ENSTGUG00000014475	-	100	82.025	Taeniopygia_guttata
ENSMAMG00000007851	snrnp200	100	96.397	ENSTRUG00000001307	snrnp200	100	96.397	Takifugu_rubripes
ENSMAMG00000007851	snrnp200	99	91.220	ENSTNIG00000004320	snrnp200	100	84.299	Tetraodon_nigroviridis
ENSMAMG00000007851	snrnp200	82	93.427	ENSTBEG00000003329	-	67	93.427	Tupaia_belangeri
ENSMAMG00000007851	snrnp200	99	90.033	ENSTTRG00000004983	SNRNP200	100	90.080	Tursiops_truncatus
ENSMAMG00000007851	snrnp200	75	83.156	ENSUAMG00000008395	-	95	83.253	Ursus_americanus
ENSMAMG00000007851	snrnp200	99	90.267	ENSUMAG00000012385	SNRNP200	100	90.314	Ursus_maritimus
ENSMAMG00000007851	snrnp200	87	93.568	ENSVPAG00000006434	SNRNP200	66	93.568	Vicugna_pacos
ENSMAMG00000007851	snrnp200	99	90.056	ENSVVUG00000026247	SNRNP200	100	90.103	Vulpes_vulpes
ENSMAMG00000007851	snrnp200	99	89.995	ENSXETG00000001243	snrnp200	100	90.042	Xenopus_tropicalis
ENSMAMG00000007851	snrnp200	97	96.197	ENSXMAG00000002058	snrnp200	98	96.251	Xiphophorus_maculatus