EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000007875 (Gene tree)
Gene ID: 113126266
Gene Symbol: sfpq
Alias: hm:zeh0027|wis|wu:fa11h12|wu:fd10f03|zgc:85935
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 17539 bases
Position: chrOOHQ01000103.1:18241782-18259320
Accession: 113126266
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000011621	RRM_1	PF00076.22	5.7e-31	1	2
ENSMAMP00000011621	RRM_1	PF00076.22	5.7e-31	2	2
ENSMAMP00000011630	RRM_1	PF00076.22	6.3e-31	1	2
ENSMAMP00000011630	RRM_1	PF00076.22	6.3e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000011943	-	1893	-	ENSMAMP00000011630	630 (aa)	XP_026156009	UPI000E465A32
ENSMAMT00000011933	-	3129	-	ENSMAMP00000011621	602 (aa)	XP_026156010	UPI000E4560FC

Gene Model

Click here to download ENSMAMG00000007875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000007875's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000007875	sfpq	62	58.205	ENSMAMG00000004333	pspc1	88	50.873

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000007875	sfpq	66	77.726	ENSG00000116560	SFPQ	97	74.654	Homo_sapiens
ENSMAMG00000007875	sfpq	100	85.867	ENSAPOG00000024257	sfpq	100	75.109	Acanthochromis_polyacanthus
ENSMAMG00000007875	sfpq	66	77.726	ENSAMEG00000000815	SFPQ	99	77.294	Ailuropoda_melanoleuca
ENSMAMG00000007875	sfpq	100	80.569	ENSACIG00000000905	sfpq	100	80.569	Amphilophus_citrinellus
ENSMAMG00000007875	sfpq	100	73.692	ENSAOCG00000002889	sfpq	100	73.692	Amphiprion_ocellaris
ENSMAMG00000007875	sfpq	100	73.692	ENSAPEG00000016556	sfpq	100	73.692	Amphiprion_percula
ENSMAMG00000007875	sfpq	100	88.031	ENSATEG00000002981	sfpq	100	89.308	Anabas_testudineus
ENSMAMG00000007875	sfpq	53	54.648	ENSANAG00000021268	-	100	52.825	Aotus_nancymaae
ENSMAMG00000007875	sfpq	62	69.363	ENSANAG00000027438	-	91	52.840	Aotus_nancymaae
ENSMAMG00000007875	sfpq	51	58.529	ENSANAG00000037798	-	96	58.235	Aotus_nancymaae
ENSMAMG00000007875	sfpq	100	77.566	ENSACLG00000022332	sfpq	100	77.353	Astatotilapia_calliptera
ENSMAMG00000007875	sfpq	67	82.160	ENSAMXG00000011538	sfpq	94	63.240	Astyanax_mexicanus
ENSMAMG00000007875	sfpq	66	77.726	ENSBTAG00000016328	SFPQ	75	67.701	Bos_taurus
ENSMAMG00000007875	sfpq	66	77.726	ENSCJAG00000001431	SFPQ	61	78.190	Callithrix_jacchus
ENSMAMG00000007875	sfpq	67	73.973	ENSCAFG00000018271	-	84	62.943	Canis_familiaris
ENSMAMG00000007875	sfpq	66	77.726	ENSCAFG00000003595	-	83	67.151	Canis_familiaris
ENSMAMG00000007875	sfpq	66	72.791	ENSCAFG00000017608	-	80	63.110	Canis_familiaris
ENSMAMG00000007875	sfpq	67	73.973	ENSCAFG00020004881	-	84	62.500	Canis_lupus_dingo
ENSMAMG00000007875	sfpq	53	69.801	ENSCAFG00020010702	-	100	70.000	Canis_lupus_dingo
ENSMAMG00000007875	sfpq	66	77.726	ENSCHIG00000023097	SFPQ	75	67.518	Capra_hircus
ENSMAMG00000007875	sfpq	53	75.568	ENSTSYG00000037120	-	100	75.852	Carlito_syrichta
ENSMAMG00000007875	sfpq	53	65.230	ENSTSYG00000035106	-	98	65.230	Carlito_syrichta
ENSMAMG00000007875	sfpq	53	67.521	ENSCPOG00000015018	-	100	66.391	Cavia_porcellus
ENSMAMG00000007875	sfpq	66	77.726	ENSCCAG00000029361	-	61	78.190	Cebus_capucinus
ENSMAMG00000007875	sfpq	66	52.283	ENSCATG00000032664	-	78	44.118	Cercocebus_atys
ENSMAMG00000007875	sfpq	59	80.618	ENSCATG00000036179	-	53	79.564	Cercocebus_atys
ENSMAMG00000007875	sfpq	53	75.568	ENSCLAG00000009583	-	100	75.852	Chinchilla_lanigera
ENSMAMG00000007875	sfpq	66	77.726	ENSCSAG00000001082	SFPQ	79	66.195	Chlorocebus_sabaeus
ENSMAMG00000007875	sfpq	50	83.660	ENSCHOG00000009131	SFPQ	100	75.591	Choloepus_hoffmanni
ENSMAMG00000007875	sfpq	68	74.444	ENSCPBG00000018674	SFPQ	82	66.851	Chrysemys_picta_bellii
ENSMAMG00000007875	sfpq	53	75.568	ENSCANG00000028087	-	100	75.852	Colobus_angolensis_palliatus
ENSMAMG00000007875	sfpq	66	77.726	ENSCGRG00001011698	Sfpq	78	67.329	Cricetulus_griseus_chok1gshd
ENSMAMG00000007875	sfpq	66	77.674	ENSCGRG00000010128	Sfpq	95	77.958	Cricetulus_griseus_crigri
ENSMAMG00000007875	sfpq	100	68.446	ENSCVAG00000019538	sfpq	97	70.750	Cyprinodon_variegatus
ENSMAMG00000007875	sfpq	95	66.118	ENSDARG00000011564	sfpq	100	86.957	Danio_rerio
ENSMAMG00000007875	sfpq	66	77.726	ENSDNOG00000049454	SFPQ	76	66.971	Dasypus_novemcinctus
ENSMAMG00000007875	sfpq	66	77.726	ENSDORG00000008109	Sfpq	78	67.151	Dipodomys_ordii
ENSMAMG00000007875	sfpq	66	71.230	ENSETEG00000001095	SFPQ	61	66.593	Echinops_telfairi
ENSMAMG00000007875	sfpq	66	77.726	ENSEASG00005012012	SFPQ	77	67.151	Equus_asinus_asinus
ENSMAMG00000007875	sfpq	66	77.726	ENSECAG00000000642	SFPQ	77	67.151	Equus_caballus
ENSMAMG00000007875	sfpq	66	77.726	ENSFCAG00000042862	SFPQ	78	66.969	Felis_catus
ENSMAMG00000007875	sfpq	53	74.432	ENSFALG00000000731	SFPQ	100	74.716	Ficedula_albicollis
ENSMAMG00000007875	sfpq	53	66.572	ENSFDAG00000017723	-	100	67.705	Fukomys_damarensis
ENSMAMG00000007875	sfpq	100	71.735	ENSFHEG00000015200	sfpq	100	59.572	Fundulus_heteroclitus
ENSMAMG00000007875	sfpq	90	88.095	ENSGMOG00000011950	SFPQ	99	72.414	Gadus_morhua
ENSMAMG00000007875	sfpq	95	71.178	ENSGMOG00000011957	sfpq	99	73.643	Gadus_morhua
ENSMAMG00000007875	sfpq	67	75.057	ENSGALG00000002514	SFPQ	81	67.532	Gallus_gallus
ENSMAMG00000007875	sfpq	99	69.536	ENSGAFG00000014571	sfpq	97	70.364	Gambusia_affinis
ENSMAMG00000007875	sfpq	100	82.380	ENSGACG00000002034	sfpq	100	82.381	Gasterosteus_aculeatus
ENSMAMG00000007875	sfpq	66	77.726	ENSGGOG00000026354	SFPQ	100	75.852	Gorilla_gorilla
ENSMAMG00000007875	sfpq	100	77.566	ENSHBUG00000016818	sfpq	100	77.500	Haplochromis_burtoni
ENSMAMG00000007875	sfpq	66	77.189	ENSHGLG00000012001	SFPQ	80	66.312	Heterocephalus_glaber_female
ENSMAMG00000007875	sfpq	53	75.568	ENSHGLG00100004136	-	100	75.852	Heterocephalus_glaber_male
ENSMAMG00000007875	sfpq	100	67.717	ENSHCOG00000008612	sfpq	95	77.115	Hippocampus_comes
ENSMAMG00000007875	sfpq	94	63.972	ENSIPUG00000013076	SFPQ	96	66.612	Ictalurus_punctatus
ENSMAMG00000007875	sfpq	53	75.568	ENSSTOG00000014004	-	100	75.852	Ictidomys_tridecemlineatus
ENSMAMG00000007875	sfpq	66	77.726	ENSJJAG00000015633	Sfpq	75	67.161	Jaculus_jaculus
ENSMAMG00000007875	sfpq	100	76.211	ENSKMAG00000000238	sfpq	91	74.237	Kryptolebias_marmoratus
ENSMAMG00000007875	sfpq	100	71.041	ENSLBEG00000003163	sfpq	96	73.099	Labrus_bergylta
ENSMAMG00000007875	sfpq	91	65.946	ENSLOCG00000001067	sfpq	94	65.729	Lepisosteus_oculatus
ENSMAMG00000007875	sfpq	66	77.494	ENSLAFG00000015951	SFPQ	84	66.976	Loxodonta_africana
ENSMAMG00000007875	sfpq	66	77.726	ENSMFAG00000000797	SFPQ	79	66.195	Macaca_fascicularis
ENSMAMG00000007875	sfpq	66	77.726	ENSMMUG00000019154	SFPQ	79	66.018	Macaca_mulatta
ENSMAMG00000007875	sfpq	66	77.726	ENSMNEG00000038895	SFPQ	79	66.195	Macaca_nemestrina
ENSMAMG00000007875	sfpq	53	73.011	ENSMLEG00000010643	-	100	73.295	Mandrillus_leucophaeus
ENSMAMG00000007875	sfpq	100	78.338	ENSMZEG00005026091	sfpq	100	78.125	Maylandia_zebra
ENSMAMG00000007875	sfpq	54	78.571	ENSMGAG00000004237	SFPQ	100	72.194	Meleagris_gallopavo
ENSMAMG00000007875	sfpq	66	77.726	ENSMAUG00000006402	Sfpq	78	67.148	Mesocricetus_auratus
ENSMAMG00000007875	sfpq	66	77.726	ENSMICG00000027265	SFPQ	81	61.831	Microcebus_murinus
ENSMAMG00000007875	sfpq	68	73.602	ENSMOCG00000019075	Sfpq	97	68.136	Microtus_ochrogaster
ENSMAMG00000007875	sfpq	100	82.889	ENSMMOG00000001074	sfpq	100	81.337	Mola_mola
ENSMAMG00000007875	sfpq	66	76.977	ENSMODG00000017937	SFPQ	68	71.166	Monodelphis_domestica
ENSMAMG00000007875	sfpq	100	83.281	ENSMALG00000010381	sfpq	100	83.861	Monopterus_albus
ENSMAMG00000007875	sfpq	66	77.726	MGP_CAROLIEiJ_G0026487	Sfpq	78	66.727	Mus_caroli
ENSMAMG00000007875	sfpq	66	77.726	ENSMUSG00000028820	Sfpq	78	66.727	Mus_musculus
ENSMAMG00000007875	sfpq	66	77.726	MGP_PahariEiJ_G0028818	Sfpq	76	68.097	Mus_pahari
ENSMAMG00000007875	sfpq	66	77.726	MGP_SPRETEiJ_G0027466	Sfpq	78	66.727	Mus_spretus
ENSMAMG00000007875	sfpq	50	76.603	ENSMPUG00000014931	-	100	76.282	Mustela_putorius_furo
ENSMAMG00000007875	sfpq	66	77.494	ENSMLUG00000027090	SFPQ	96	77.726	Myotis_lucifugus
ENSMAMG00000007875	sfpq	66	77.958	ENSNGAG00000000888	Sfpq	61	78.654	Nannospalax_galili
ENSMAMG00000007875	sfpq	100	77.976	ENSNBRG00000017479	sfpq	100	78.125	Neolamprologus_brichardi
ENSMAMG00000007875	sfpq	53	75.568	ENSNLEG00000035521	-	100	75.852	Nomascus_leucogenys
ENSMAMG00000007875	sfpq	67	76.267	ENSMEUG00000014082	SFPQ	61	77.622	Notamacropus_eugenii
ENSMAMG00000007875	sfpq	70	74.510	ENSOPRG00000013696	SFPQ	65	74.946	Ochotona_princeps
ENSMAMG00000007875	sfpq	63	68.434	ENSODEG00000005485	SFPQ	96	59.211	Octodon_degus
ENSMAMG00000007875	sfpq	100	77.596	ENSONIG00000017737	sfpq	100	76.625	Oreochromis_niloticus
ENSMAMG00000007875	sfpq	53	75.499	ENSOANG00000008789	-	100	75.783	Ornithorhynchus_anatinus
ENSMAMG00000007875	sfpq	66	77.726	ENSOCUG00000001877	SFPQ	85	77.958	Oryctolagus_cuniculus
ENSMAMG00000007875	sfpq	100	67.769	ENSORLG00000007459	sfpq	100	75.092	Oryzias_latipes
ENSMAMG00000007875	sfpq	100	65.757	ENSORLG00020011818	sfpq	100	66.529	Oryzias_latipes_hni
ENSMAMG00000007875	sfpq	100	66.804	ENSORLG00015002131	sfpq	99	75.277	Oryzias_latipes_hsok
ENSMAMG00000007875	sfpq	100	65.442	ENSOMEG00000018020	sfpq	94	75.728	Oryzias_melastigma
ENSMAMG00000007875	sfpq	66	77.726	ENSOGAG00000027710	SFPQ	81	78.190	Otolemur_garnettii
ENSMAMG00000007875	sfpq	66	77.726	ENSOARG00000019439	SFPQ	66	77.262	Ovis_aries
ENSMAMG00000007875	sfpq	66	77.726	ENSPPAG00000030078	SFPQ	61	78.422	Pan_paniscus
ENSMAMG00000007875	sfpq	53	75.354	ENSPPRG00000015478	-	100	75.637	Panthera_pardus
ENSMAMG00000007875	sfpq	53	75.568	ENSPTIG00000007710	-	100	75.852	Panthera_tigris_altaica
ENSMAMG00000007875	sfpq	66	71.926	ENSPTRG00000000518	SFPQ	59	72.390	Pan_troglodytes
ENSMAMG00000007875	sfpq	82	73.004	ENSPKIG00000023035	sfpq	96	67.541	Paramormyrops_kingsleyae
ENSMAMG00000007875	sfpq	66	77.726	ENSPSIG00000011494	SFPQ	99	76.566	Pelodiscus_sinensis
ENSMAMG00000007875	sfpq	100	66.412	ENSPMGG00000023883	sfpq	100	66.112	Periophthalmus_magnuspinnatus
ENSMAMG00000007875	sfpq	66	77.726	ENSPEMG00000009794	Sfpq	90	77.294	Peromyscus_maniculatus_bairdii
ENSMAMG00000007875	sfpq	54	72.923	ENSPMAG00000005583	sfpq	87	62.061	Petromyzon_marinus
ENSMAMG00000007875	sfpq	67	76.322	ENSPCIG00000000923	SFPQ	75	68.491	Phascolarctos_cinereus
ENSMAMG00000007875	sfpq	100	68.966	ENSPFOG00000003127	sfpq	95	72.865	Poecilia_formosa
ENSMAMG00000007875	sfpq	100	64.888	ENSPREG00000008060	sfpq	100	63.470	Poecilia_reticulata
ENSMAMG00000007875	sfpq	66	77.726	ENSPPYG00000001560	SFPQ	61	78.422	Pongo_abelii
ENSMAMG00000007875	sfpq	65	77.209	ENSPCAG00000006164	SFPQ	60	77.674	Procavia_capensis
ENSMAMG00000007875	sfpq	66	77.726	ENSPCOG00000027127	SFPQ	61	78.422	Propithecus_coquereli
ENSMAMG00000007875	sfpq	66	75.524	ENSPVAG00000001865	SFPQ	78	65.392	Pteropus_vampyrus
ENSMAMG00000007875	sfpq	100	76.122	ENSPNYG00000007494	sfpq	100	74.311	Pundamilia_nyererei
ENSMAMG00000007875	sfpq	95	65.696	ENSPNAG00000002128	sfpq	95	66.831	Pygocentrus_nattereri
ENSMAMG00000007875	sfpq	66	77.726	ENSRNOG00000058461	Sfpq	78	67.091	Rattus_norvegicus
ENSMAMG00000007875	sfpq	67	70.295	ENSRBIG00000035286	SFPQ	100	75.852	Rhinopithecus_bieti
ENSMAMG00000007875	sfpq	53	75.568	ENSRROG00000040992	SFPQ	100	75.852	Rhinopithecus_roxellana
ENSMAMG00000007875	sfpq	53	75.568	ENSSBOG00000024972	-	100	75.852	Saimiri_boliviensis_boliviensis
ENSMAMG00000007875	sfpq	50	56.024	ENSSBOG00000033925	-	96	54.491	Saimiri_boliviensis_boliviensis
ENSMAMG00000007875	sfpq	53	72.857	ENSSHAG00000012312	-	100	71.714	Sarcophilus_harrisii
ENSMAMG00000007875	sfpq	63	78.608	ENSSHAG00000016107	-	97	72.284	Sarcophilus_harrisii
ENSMAMG00000007875	sfpq	81	75.287	ENSSFOG00015009289	sfpq	96	67.377	Scleropages_formosus
ENSMAMG00000007875	sfpq	100	82.893	ENSSMAG00000018201	sfpq	100	83.515	Scophthalmus_maximus
ENSMAMG00000007875	sfpq	100	87.944	ENSSDUG00000008402	sfpq	100	88.099	Seriola_dumerili
ENSMAMG00000007875	sfpq	100	87.519	ENSSLDG00000018917	sfpq	100	87.827	Seriola_lalandi_dorsalis
ENSMAMG00000007875	sfpq	56	76.694	ENSSARG00000006409	SFPQ	100	76.965	Sorex_araneus
ENSMAMG00000007875	sfpq	100	81.520	ENSSPAG00000016550	sfpq	100	82.563	Stegastes_partitus
ENSMAMG00000007875	sfpq	66	77.726	ENSSSCG00000035690	SFPQ	77	66.606	Sus_scrofa
ENSMAMG00000007875	sfpq	66	76.566	ENSTGUG00000001722	SFPQ	99	75.870	Taeniopygia_guttata
ENSMAMG00000007875	sfpq	100	76.844	ENSTRUG00000003783	sfpq	100	75.037	Takifugu_rubripes
ENSMAMG00000007875	sfpq	86	77.431	ENSTNIG00000011331	sfpq	99	76.412	Tetraodon_nigroviridis
ENSMAMG00000007875	sfpq	52	81.923	ENSTBEG00000006238	SFPQ	77	63.185	Tupaia_belangeri
ENSMAMG00000007875	sfpq	66	75.581	ENSTTRG00000013930	SFPQ	77	65.746	Tursiops_truncatus
ENSMAMG00000007875	sfpq	53	73.295	ENSUMAG00000008056	-	100	73.580	Ursus_maritimus
ENSMAMG00000007875	sfpq	53	68.571	ENSVVUG00000000874	-	100	68.857	Vulpes_vulpes
ENSMAMG00000007875	sfpq	65	74.874	ENSXETG00000009682	sfpq	100	78.638	Xenopus_tropicalis
ENSMAMG00000007875	sfpq	100	66.373	ENSXMAG00000016391	sfpq	100	66.226	Xiphophorus_maculatus