EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMAMG00000007979 (Gene tree)
Gene ID
113129705
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Plus strand
Length
14388 bases
Position
chrOOHQ01000024.1:1290824-1305211
Accession
113129705
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000011799RRM_1PF00076.223.6e-1711
ENSMAMP00000011791RRM_1PF00076.223.8e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000012107-4568-ENSMAMP00000011791290 (aa)--
ENSMAMT00000012115-4544-ENSMAMP00000011799282 (aa)XP_026161544UPI000E45B0F0
Gene Model
Click here to download ENSMAMG00000007979's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000007979's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000007979pabpn16881.773ENSG00000100836PABPN19282.051Homo_sapiens
ENSMAMG00000007979pabpn17872.174ENSG00000258643BCL2L2-PABPN16672.398Homo_sapiens
ENSMAMG00000007979pabpn110097.887ENSAPOG00000016425pabpn110097.887Acanthochromis_polyacanthus
ENSMAMG00000007979pabpn16383.422ENSAMEG00000007048BCL2L2-PABPN19484.270Ailuropoda_melanoleuca
ENSMAMG00000007979pabpn110095.804ENSACIG00000021744pabpn19898.266Amphilophus_citrinellus
ENSMAMG00000007979pabpn17998.253ENSAOCG00000015805pabpn19998.253Amphiprion_ocellaris
ENSMAMG00000007979pabpn17998.253ENSAPEG00000009623pabpn19998.253Amphiprion_percula
ENSMAMG00000007979pabpn17998.690ENSATEG00000020531pabpn19998.690Anabas_testudineus
ENSMAMG00000007979pabpn16385.027ENSACAG00000006185-7379.710Anolis_carolinensis
ENSMAMG00000007979pabpn16683.077ENSANAG00000024513-8076.087Aotus_nancymaae
ENSMAMG00000007979pabpn110095.470ENSACLG00000016374pabpn110095.470Astatotilapia_calliptera
ENSMAMG00000007979pabpn110087.279ENSAMXG00000000452pabpn19996.087Astyanax_mexicanus
ENSMAMG00000007979pabpn16184.483ENSBTAG00000050594-7482.796Bos_taurus
ENSMAMG00000007979pabpn16482.011ENSBTAG00000053753-6782.778Bos_taurus
ENSMAMG00000007979pabpn16683.077ENSBTAG00000006884PABPN18470.238Bos_taurus
ENSMAMG00000007979pabpn15158.904WBGene00003904pabp-28655.000Caenorhabditis_elegans
ENSMAMG00000007979pabpn15679.394ENSCJAG00000004407-7880.128Callithrix_jacchus
ENSMAMG00000007979pabpn17875.217ENSCJAG00000007960-7976.786Callithrix_jacchus
ENSMAMG00000007979pabpn16881.773ENSCAFG00000011482PABPN18271.032Canis_familiaris
ENSMAMG00000007979pabpn16881.773ENSCAFG00020006651-8270.635Canis_lupus_dingo
ENSMAMG00000007979pabpn16881.773ENSCAFG00020007298-8270.635Canis_lupus_dingo
ENSMAMG00000007979pabpn16881.773ENSCHIG00000012184PABPN18270.635Capra_hircus
ENSMAMG00000007979pabpn17872.174ENSTSYG00000033996BCL2L2-PABPN18782.051Carlito_syrichta
ENSMAMG00000007979pabpn16881.773ENSCPOG00000025574PABPN18569.732Cavia_porcellus
ENSMAMG00000007979pabpn17875.217ENSCCAG00000033954BCL2L2-PABPN17976.786Cebus_capucinus
ENSMAMG00000007979pabpn17875.217ENSCATG00000038536BCL2L2-PABPN17976.786Cercocebus_atys
ENSMAMG00000007979pabpn15180.537ENSCLAG00000012423PABPN18553.818Chinchilla_lanigera
ENSMAMG00000007979pabpn16880.296ENSCSAG00000016036PABPN18269.048Chlorocebus_sabaeus
ENSMAMG00000007979pabpn17071.981ENSCHOG00000004798BCL2L2-PABPN18770.192Choloepus_hoffmanni
ENSMAMG00000007979pabpn15683.636ENSCPBG00000026060-8784.615Chrysemys_picta_bellii
ENSMAMG00000007979pabpn17161.538ENSCING00000012468-8464.000Ciona_intestinalis
ENSMAMG00000007979pabpn16062.857ENSCSAVG00000002001-8068.889Ciona_savignyi
ENSMAMG00000007979pabpn16670.984ENSCANG00000030980-8364.474Colobus_angolensis_palliatus
ENSMAMG00000007979pabpn17872.174ENSCANG00000009750BCL2L2-PABPN18782.051Colobus_angolensis_palliatus
ENSMAMG00000007979pabpn16881.281ENSCGRG00001019696Pabpn18781.410Cricetulus_griseus_chok1gshd
ENSMAMG00000007979pabpn15191.156ENSCGRG00000011102Pabpn19191.156Cricetulus_griseus_crigri
ENSMAMG00000007979pabpn18396.694ENSCSEG00000008774pabpn19996.507Cynoglossus_semilaevis
ENSMAMG00000007979pabpn110093.878ENSCVAG00000003152pabpn110094.898Cyprinodon_variegatus
ENSMAMG00000007979pabpn110095.423ENSDARG00000045373pabpn110096.364Danio_rerio
ENSMAMG00000007979pabpn16354.645ENSDARG00000087996pabpn1l8659.184Danio_rerio
ENSMAMG00000007979pabpn16881.773ENSDNOG00000023682PABPN18270.635Dasypus_novemcinctus
ENSMAMG00000007979pabpn16881.281ENSDORG00000028966-8269.841Dipodomys_ordii
ENSMAMG00000007979pabpn17957.692FBgn0005648Pabp29758.333Drosophila_melanogaster
ENSMAMG00000007979pabpn17972.926ENSEBUG00000002322pabpn19772.926Eptatretus_burgeri
ENSMAMG00000007979pabpn16882.266ENSEASG00005011716PABPN18570.881Equus_asinus_asinus
ENSMAMG00000007979pabpn16882.178ENSECAG00000011652PABPN18570.751Equus_caballus
ENSMAMG00000007979pabpn16879.803ENSEEUG00000012973-6978.325Erinaceus_europaeus
ENSMAMG00000007979pabpn17994.444ENSELUG00000022654pabpn19994.444Esox_lucius
ENSMAMG00000007979pabpn16881.773ENSFCAG00000031922PABPN18270.635Felis_catus
ENSMAMG00000007979pabpn15681.212ENSFDAG00000018381BCL2L2-PABPN19281.212Fukomys_damarensis
ENSMAMG00000007979pabpn17994.323ENSFHEG00000007215pabpn19994.323Fundulus_heteroclitus
ENSMAMG00000007979pabpn110091.579ENSGMOG00000003922pabpn110094.386Gadus_morhua
ENSMAMG00000007979pabpn16183.708ENSGALG00000052930-6279.909Gallus_gallus
ENSMAMG00000007979pabpn17996.537ENSGAFG00000017099pabpn19996.537Gambusia_affinis
ENSMAMG00000007979pabpn110097.183ENSGACG00000002167pabpn110097.183Gasterosteus_aculeatus
ENSMAMG00000007979pabpn17875.217ENSGGOG00000022683-7976.786Gorilla_gorilla
ENSMAMG00000007979pabpn17465.086ENSGGOG00000025919-9068.613Gorilla_gorilla
ENSMAMG00000007979pabpn17069.192ENSGGOG00000039675-8765.652Gorilla_gorilla
ENSMAMG00000007979pabpn17997.817ENSHBUG00000019523pabpn19997.817Haplochromis_burtoni
ENSMAMG00000007979pabpn16574.468ENSHGLG00000018588-7074.468Heterocephalus_glaber_female
ENSMAMG00000007979pabpn16881.281ENSHGLG00000002927-9291.156Heterocephalus_glaber_female
ENSMAMG00000007979pabpn15662.195ENSHGLG00000009842-8764.052Heterocephalus_glaber_female
ENSMAMG00000007979pabpn16574.468ENSHGLG00100015565-8765.939Heterocephalus_glaber_male
ENSMAMG00000007979pabpn15668.902ENSHGLG00100018935-8874.051Heterocephalus_glaber_male
ENSMAMG00000007979pabpn17771.946ENSHGLG00100006673-9291.156Heterocephalus_glaber_male
ENSMAMG00000007979pabpn17996.943ENSHCOG00000004655pabpn19996.943Hippocampus_comes
ENSMAMG00000007979pabpn110089.003ENSIPUG00000008085PABPN19996.507Ictalurus_punctatus
ENSMAMG00000007979pabpn17988.210ENSIPUG00000000180-9888.210Ictalurus_punctatus
ENSMAMG00000007979pabpn15681.212ENSSTOG00000029847BCL2L2-PABPN18782.051Ictidomys_tridecemlineatus
ENSMAMG00000007979pabpn15681.212ENSJJAG00000023507Gm205218782.051Jaculus_jaculus
ENSMAMG00000007979pabpn110096.140ENSKMAG00000018748pabpn110096.140Kryptolebias_marmoratus
ENSMAMG00000007979pabpn110097.887ENSLBEG00000027266pabpn110097.887Labrus_bergylta
ENSMAMG00000007979pabpn16288.764ENSLACG00000000646pabpn18585.052Latimeria_chalumnae
ENSMAMG00000007979pabpn16667.539ENSLOCG00000004694pabpn1l9366.337Lepisosteus_oculatus
ENSMAMG00000007979pabpn110091.579ENSLOCG00000000796pabpn110091.930Lepisosteus_oculatus
ENSMAMG00000007979pabpn15181.208ENSLAFG00000031227-9182.734Loxodonta_africana
ENSMAMG00000007979pabpn17872.174ENSMFAG00000032183BCL2L2-PABPN18782.051Macaca_fascicularis
ENSMAMG00000007979pabpn17872.174ENSMMUG00000014747BCL2L2-PABPN19282.222Macaca_mulatta
ENSMAMG00000007979pabpn16867.327ENSMMUG00000048382-8458.824Macaca_mulatta
ENSMAMG00000007979pabpn17875.217ENSMNEG00000045065BCL2L2-PABPN17976.786Macaca_nemestrina
ENSMAMG00000007979pabpn16268.306ENSMNEG00000035750-9073.846Macaca_nemestrina
ENSMAMG00000007979pabpn15665.244ENSMLEG00000034623-9272.727Mandrillus_leucophaeus
ENSMAMG00000007979pabpn17872.174ENSMLEG00000043862BCL2L2-PABPN18782.051Mandrillus_leucophaeus
ENSMAMG00000007979pabpn110097.887ENSMZEG00005011904pabpn110097.887Maylandia_zebra
ENSMAMG00000007979pabpn17872.174ENSMAUG00000007383Gm205218370.400Mesocricetus_auratus
ENSMAMG00000007979pabpn17876.190ENSMICG00000010002BCL2L2-PABPN17977.232Microcebus_murinus
ENSMAMG00000007979pabpn17871.739ENSMOCG00000018557Gm205219091.156Microtus_ochrogaster
ENSMAMG00000007979pabpn110098.239ENSMMOG00000005405pabpn110098.239Mola_mola
ENSMAMG00000007979pabpn16879.703ENSMODG00000004535-8570.498Monodelphis_domestica
ENSMAMG00000007979pabpn110097.535ENSMALG00000019612pabpn110097.535Monopterus_albus
ENSMAMG00000007979pabpn16880.296MGP_CAROLIEiJ_G0019277Pabpn19090.476Mus_caroli
ENSMAMG00000007979pabpn17871.304MGP_CAROLIEiJ_G0019276Gm205216671.493Mus_caroli
ENSMAMG00000007979pabpn16880.788ENSMUSG00000022194Pabpn19090.476Mus_musculus
ENSMAMG00000007979pabpn17871.739ENSMUSG00000092232Gm205216671.946Mus_musculus
ENSMAMG00000007979pabpn17871.739MGP_PahariEiJ_G0030294Gm205216671.946Mus_pahari
ENSMAMG00000007979pabpn16880.788MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSMAMG00000007979pabpn17871.739MGP_SPRETEiJ_G0020165Gm205216671.946Mus_spretus
ENSMAMG00000007979pabpn16880.788MGP_SPRETEiJ_G0020166Pabpn19090.476Mus_spretus
ENSMAMG00000007979pabpn15482.051ENSMPUG00000006775-9282.051Mustela_putorius_furo
ENSMAMG00000007979pabpn16480.214ENSMLUG00000012452-8568.321Myotis_lucifugus
ENSMAMG00000007979pabpn16382.353ENSMLUG00000003800-9483.146Myotis_lucifugus
ENSMAMG00000007979pabpn16680.513ENSMLUG00000028677-8073.214Myotis_lucifugus
ENSMAMG00000007979pabpn17872.609ENSNGAG00000019529Gm205216672.851Nannospalax_galili
ENSMAMG00000007979pabpn110097.535ENSNBRG00000023955pabpn110097.535Neolamprologus_brichardi
ENSMAMG00000007979pabpn17872.174ENSNLEG00000015007-7082.234Nomascus_leucogenys
ENSMAMG00000007979pabpn15059.310ENSNLEG00000035292-9462.687Nomascus_leucogenys
ENSMAMG00000007979pabpn16867.980ENSNLEG00000030598-7770.526Nomascus_leucogenys
ENSMAMG00000007979pabpn17871.739ENSODEG00000002083BCL2L2-PABPN18269.444Octodon_degus
ENSMAMG00000007979pabpn16873.500ENSODEG00000003739-8763.525Octodon_degus
ENSMAMG00000007979pabpn16071.591ENSODEG00000011555-8173.026Octodon_degus
ENSMAMG00000007979pabpn110097.535ENSONIG00000008112pabpn110097.535Oreochromis_niloticus
ENSMAMG00000007979pabpn16881.281ENSOCUG00000016174PABPN19070.400Oryctolagus_cuniculus
ENSMAMG00000007979pabpn110096.575ENSORLG00000027900pabpn110096.575Oryzias_latipes
ENSMAMG00000007979pabpn110096.575ENSORLG00020004681pabpn110096.575Oryzias_latipes_hni
ENSMAMG00000007979pabpn110096.575ENSORLG00015000018pabpn110096.575Oryzias_latipes_hsok
ENSMAMG00000007979pabpn110097.183ENSOMEG00000016618pabpn110097.183Oryzias_melastigma
ENSMAMG00000007979pabpn16881.773ENSOGAG00000008710PABPN18270.635Otolemur_garnettii
ENSMAMG00000007979pabpn17872.174ENSOARG00000019336BCL2L2-PABPN16172.398Ovis_aries
ENSMAMG00000007979pabpn15666.258ENSPPAG00000039421-8766.667Pan_paniscus
ENSMAMG00000007979pabpn17872.174ENSPPAG00000028984BCL2L2-PABPN19282.051Pan_paniscus
ENSMAMG00000007979pabpn16881.773ENSPPRG00000010567PABPN18270.635Panthera_pardus
ENSMAMG00000007979pabpn15681.212ENSPTIG00000001063BCL2L2-PABPN18782.051Panthera_tigris_altaica
ENSMAMG00000007979pabpn17875.217ENSPTRG00000006167BCL2L27976.786Pan_troglodytes
ENSMAMG00000007979pabpn17962.500ENSPTRG00000047273-8960.331Pan_troglodytes
ENSMAMG00000007979pabpn17875.217ENSPANG00000021100BCL2L2-PABPN17976.786Papio_anubis
ENSMAMG00000007979pabpn16668.718ENSPANG00000023326-9074.615Papio_anubis
ENSMAMG00000007979pabpn110095.070ENSPKIG00000008144-10095.070Paramormyrops_kingsleyae
ENSMAMG00000007979pabpn15869.512ENSPKIG00000008340pabpn1l8667.039Paramormyrops_kingsleyae
ENSMAMG00000007979pabpn110088.732ENSPKIG00000018052pabpn19994.348Paramormyrops_kingsleyae
ENSMAMG00000007979pabpn110092.908ENSPMGG00000022027pabpn110092.908Periophthalmus_magnuspinnatus
ENSMAMG00000007979pabpn17872.174ENSPEMG00000008332Gm205218991.156Peromyscus_maniculatus_bairdii
ENSMAMG00000007979pabpn16575.135ENSPMAG00000006212pabpn19468.670Petromyzon_marinus
ENSMAMG00000007979pabpn16879.208ENSPCIG00000027751-8270.238Phascolarctos_cinereus
ENSMAMG00000007979pabpn110096.599ENSPFOG00000010351pabpn110096.599Poecilia_formosa
ENSMAMG00000007979pabpn110096.599ENSPLAG00000022696pabpn110096.599Poecilia_latipinna
ENSMAMG00000007979pabpn17996.104ENSPMEG00000020856pabpn19996.104Poecilia_mexicana
ENSMAMG00000007979pabpn110096.853ENSPREG00000011278pabpn110096.853Poecilia_reticulata
ENSMAMG00000007979pabpn16782.474ENSPPYG00000005663PABPN18970.635Pongo_abelii
ENSMAMG00000007979pabpn16569.271ENSPCAG00000005902PABPN18460.400Procavia_capensis
ENSMAMG00000007979pabpn17876.190ENSPCOG00000028047BCL2L2-PABPN17977.232Propithecus_coquereli
ENSMAMG00000007979pabpn16980.097ENSPVAG00000005270PABPN18269.721Pteropus_vampyrus
ENSMAMG00000007979pabpn17997.817ENSPNYG00000013182pabpn19997.817Pundamilia_nyererei
ENSMAMG00000007979pabpn15669.620ENSPNAG00000021666pabpn1l9565.641Pygocentrus_nattereri
ENSMAMG00000007979pabpn110095.423ENSPNAG00000023526pabpn19996.943Pygocentrus_nattereri
ENSMAMG00000007979pabpn16881.281ENSRNOG00000042195Pabpn18170.400Rattus_norvegicus
ENSMAMG00000007979pabpn17772.398ENSRBIG00000040762BCL2L2-PABPN16872.398Rhinopithecus_bieti
ENSMAMG00000007979pabpn16970.388ENSRBIG00000042811-7974.866Rhinopithecus_bieti
ENSMAMG00000007979pabpn17071.635ENSRBIG00000039547-7866.509Rhinopithecus_bieti
ENSMAMG00000007979pabpn17772.398ENSRROG00000045535BCL2L2-PABPN18782.051Rhinopithecus_roxellana
ENSMAMG00000007979pabpn16966.507ENSRROG00000036409-8158.366Rhinopithecus_roxellana
ENSMAMG00000007979pabpn16971.569ENSRROG00000040409-7866.509Rhinopithecus_roxellana
ENSMAMG00000007979pabpn17868.313ENSSBOG00000026930BCL2L2-PABPN19282.051Saimiri_boliviensis_boliviensis
ENSMAMG00000007979pabpn16380.645ENSSHAG00000014841-8183.708Sarcophilus_harrisii
ENSMAMG00000007979pabpn17861.702ENSSHAG00000007707-9859.149Sarcophilus_harrisii
ENSMAMG00000007979pabpn110088.772ENSSFOG00015012565pabpn110088.772Scleropages_formosus
ENSMAMG00000007979pabpn16565.027ENSSFOG00015015833pabpn1l8466.120Scleropages_formosus
ENSMAMG00000007979pabpn17995.633ENSSFOG00015014718pabpn19995.633Scleropages_formosus
ENSMAMG00000007979pabpn110098.944ENSSMAG00000020157pabpn110098.944Scophthalmus_maximus
ENSMAMG00000007979pabpn110097.945ENSSDUG00000020582pabpn110097.945Seriola_dumerili
ENSMAMG00000007979pabpn17998.690ENSSLDG00000007118pabpn19998.690Seriola_lalandi_dorsalis
ENSMAMG00000007979pabpn15186.301ENSSPUG00000018308-8784.615Sphenodon_punctatus
ENSMAMG00000007979pabpn110096.842ENSSPAG00000021658pabpn110096.842Stegastes_partitus
ENSMAMG00000007979pabpn17362.150ENSSSCG00000034805-7561.905Sus_scrofa
ENSMAMG00000007979pabpn16882.266ENSSSCG00000002023PABPN18570.881Sus_scrofa
ENSMAMG00000007979pabpn110096.479ENSTRUG00000023664pabpn110096.479Takifugu_rubripes
ENSMAMG00000007979pabpn17198.010ENSTNIG00000005369pabpn19398.010Tetraodon_nigroviridis
ENSMAMG00000007979pabpn16881.773ENSUAMG00000024460PABPN18270.635Ursus_americanus
ENSMAMG00000007979pabpn17872.609ENSUMAG00000014288BCL2L2-PABPN16672.398Ursus_maritimus
ENSMAMG00000007979pabpn17872.174ENSVVUG00000019912BCL2L2-PABPN17182.967Vulpes_vulpes
ENSMAMG00000007979pabpn16686.010ENSXETG00000014597pabpn16983.333Xenopus_tropicalis
ENSMAMG00000007979pabpn15985.465ENSXCOG00000005158pabpn19685.465Xiphophorus_couchianus
ENSMAMG00000007979pabpn110097.279ENSXMAG00000006196pabpn110097.279Xiphophorus_maculatus

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