EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000008056 (Gene tree)
Gene ID: 113141075
Gene Symbol: polr2f
Alias: zgc:92790
Full Name: RNA polymerase II subunit F
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 3177 bases
Position: chrOOHQ01000092.1:21304755-21307931
Accession: 113141075
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000011899	RNA_pol_Rpb6	PF01192.22	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000012218	-	2634	-	ENSMAMP00000011899	127 (aa)	XP_026181078	UPI000E45D740

Gene Model

Click here to download ENSMAMG00000008056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000008056's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000008056	polr2f	100	89.764	ENSG00000100142	POLR2F	100	89.764	Homo_sapiens
ENSMAMG00000008056	polr2f	100	97.638	ENSAPOG00000002902	polr2f	100	97.638	Acanthochromis_polyacanthus
ENSMAMG00000008056	polr2f	100	88.976	ENSAMEG00000010331	POLR2F	100	88.976	Ailuropoda_melanoleuca
ENSMAMG00000008056	polr2f	100	97.638	ENSACIG00000000923	polr2f	100	97.638	Amphilophus_citrinellus
ENSMAMG00000008056	polr2f	100	98.425	ENSAOCG00000003182	polr2f	100	98.425	Amphiprion_ocellaris
ENSMAMG00000008056	polr2f	100	98.425	ENSAPEG00000012999	polr2f	100	98.425	Amphiprion_percula
ENSMAMG00000008056	polr2f	100	97.638	ENSATEG00000008929	polr2f	100	97.638	Anabas_testudineus
ENSMAMG00000008056	polr2f	80	90.099	ENSAPLG00000015235	POLR2F	85	89.623	Anas_platyrhynchos
ENSMAMG00000008056	polr2f	100	90.551	ENSACAG00000015288	POLR2F	100	90.551	Anolis_carolinensis
ENSMAMG00000008056	polr2f	100	89.764	ENSANAG00000020840	POLR2F	100	89.764	Aotus_nancymaae
ENSMAMG00000008056	polr2f	100	98.425	ENSACLG00000016129	polr2f	100	98.425	Astatotilapia_calliptera
ENSMAMG00000008056	polr2f	100	96.850	ENSAMXG00000012812	polr2f	100	96.850	Astyanax_mexicanus
ENSMAMG00000008056	polr2f	100	89.764	ENSBTAG00000004820	POLR2F	100	89.764	Bos_taurus
ENSMAMG00000008056	polr2f	63	77.500	WBGene00007355	rpb-6	76	64.762	Caenorhabditis_elegans
ENSMAMG00000008056	polr2f	100	89.764	ENSCJAG00000048241	POLR2F	100	89.764	Callithrix_jacchus
ENSMAMG00000008056	polr2f	100	88.976	ENSCAFG00000001437	POLR2F	100	88.976	Canis_familiaris
ENSMAMG00000008056	polr2f	83	90.566	ENSCHIG00000012907	POLR2F	83	90.566	Capra_hircus
ENSMAMG00000008056	polr2f	100	88.976	ENSTSYG00000008187	POLR2F	100	88.976	Carlito_syrichta
ENSMAMG00000008056	polr2f	83	90.566	ENSCAPG00000013419	POLR2F	83	90.566	Cavia_aperea
ENSMAMG00000008056	polr2f	100	89.764	ENSCPOG00000034094	POLR2F	100	89.764	Cavia_porcellus
ENSMAMG00000008056	polr2f	100	89.764	ENSCCAG00000036489	POLR2F	100	89.764	Cebus_capucinus
ENSMAMG00000008056	polr2f	100	89.764	ENSCATG00000041014	POLR2F	100	89.764	Cercocebus_atys
ENSMAMG00000008056	polr2f	100	89.764	ENSCLAG00000017167	POLR2F	100	89.764	Chinchilla_lanigera
ENSMAMG00000008056	polr2f	100	89.764	ENSCSAG00000006862	POLR2F	100	89.764	Chlorocebus_sabaeus
ENSMAMG00000008056	polr2f	83	91.509	ENSCPBG00000023030	POLR2F	54	91.509	Chrysemys_picta_bellii
ENSMAMG00000008056	polr2f	81	75.962	ENSCING00000019359	-	73	75.962	Ciona_intestinalis
ENSMAMG00000008056	polr2f	100	89.764	ENSCANG00000041884	POLR2F	100	89.764	Colobus_angolensis_palliatus
ENSMAMG00000008056	polr2f	100	89.764	ENSCGRG00001023541	POLR2F	100	89.764	Cricetulus_griseus_chok1gshd
ENSMAMG00000008056	polr2f	100	89.764	ENSCGRG00000011921	POLR2F	100	89.764	Cricetulus_griseus_crigri
ENSMAMG00000008056	polr2f	95	97.521	ENSCSEG00000006848	polr2f	95	97.521	Cynoglossus_semilaevis
ENSMAMG00000008056	polr2f	100	96.850	ENSCVAG00000010437	polr2f	100	96.850	Cyprinodon_variegatus
ENSMAMG00000008056	polr2f	100	94.488	ENSDARG00000036625	polr2f	100	94.488	Danio_rerio
ENSMAMG00000008056	polr2f	100	89.764	ENSDNOG00000005884	POLR2F	100	89.764	Dasypus_novemcinctus
ENSMAMG00000008056	polr2f	100	89.764	ENSDORG00000024789	Polr2f	100	89.764	Dipodomys_ordii
ENSMAMG00000008056	polr2f	63	85.000	FBgn0003275	RpII18	88	66.957	Drosophila_melanogaster
ENSMAMG00000008056	polr2f	54	85.294	ENSEBUG00000008509	polr2f	70	85.294	Eptatretus_burgeri
ENSMAMG00000008056	polr2f	77	67.347	ENSEBUG00000002842	-	90	64.423	Eptatretus_burgeri
ENSMAMG00000008056	polr2f	60	88.158	ENSEASG00005018802	-	69	87.013	Equus_asinus_asinus
ENSMAMG00000008056	polr2f	100	87.402	ENSEEUG00000011014	POLR2F	100	87.402	Erinaceus_europaeus
ENSMAMG00000008056	polr2f	100	94.488	ENSELUG00000000319	polr2f	100	94.488	Esox_lucius
ENSMAMG00000008056	polr2f	100	88.976	ENSFCAG00000002806	POLR2F	100	88.976	Felis_catus
ENSMAMG00000008056	polr2f	100	89.764	ENSFDAG00000009926	POLR2F	100	89.764	Fukomys_damarensis
ENSMAMG00000008056	polr2f	88	96.429	ENSFHEG00000005448	polr2f	84	96.226	Fundulus_heteroclitus
ENSMAMG00000008056	polr2f	100	88.189	ENSGMOG00000009967	polr2f	100	88.189	Gadus_morhua
ENSMAMG00000008056	polr2f	100	88.976	ENSGALG00000012291	POLR2F	100	88.976	Gallus_gallus
ENSMAMG00000008056	polr2f	100	96.063	ENSGAFG00000017573	polr2f	100	96.063	Gambusia_affinis
ENSMAMG00000008056	polr2f	100	93.701	ENSGACG00000007322	polr2f	100	93.701	Gasterosteus_aculeatus
ENSMAMG00000008056	polr2f	100	90.551	ENSGAGG00000021757	POLR2F	100	90.551	Gopherus_agassizii
ENSMAMG00000008056	polr2f	100	89.764	ENSGGOG00000005213	POLR2F	100	89.764	Gorilla_gorilla
ENSMAMG00000008056	polr2f	100	98.425	ENSHBUG00000022089	polr2f	100	98.425	Haplochromis_burtoni
ENSMAMG00000008056	polr2f	100	89.764	ENSHGLG00000018942	POLR2F	100	89.764	Heterocephalus_glaber_female
ENSMAMG00000008056	polr2f	100	89.764	ENSHGLG00100012851	POLR2F	100	89.764	Heterocephalus_glaber_male
ENSMAMG00000008056	polr2f	100	94.488	ENSHCOG00000006149	polr2f	100	94.488	Hippocampus_comes
ENSMAMG00000008056	polr2f	76	97.938	ENSIPUG00000000814	polr2f	100	97.938	Ictalurus_punctatus
ENSMAMG00000008056	polr2f	100	89.764	ENSSTOG00000025722	POLR2F	100	89.764	Ictidomys_tridecemlineatus
ENSMAMG00000008056	polr2f	100	89.764	ENSJJAG00000008097	Polr2f	100	89.764	Jaculus_jaculus
ENSMAMG00000008056	polr2f	100	97.638	ENSKMAG00000014230	polr2f	100	97.638	Kryptolebias_marmoratus
ENSMAMG00000008056	polr2f	94	95.833	ENSLBEG00000008383	polr2f	100	95.833	Labrus_bergylta
ENSMAMG00000008056	polr2f	100	92.126	ENSLACG00000003931	POLR2F	100	92.126	Latimeria_chalumnae
ENSMAMG00000008056	polr2f	100	95.385	ENSLOCG00000011827	polr2f	100	95.385	Lepisosteus_oculatus
ENSMAMG00000008056	polr2f	100	89.764	ENSLAFG00000012632	POLR2F	100	89.764	Loxodonta_africana
ENSMAMG00000008056	polr2f	100	89.764	ENSMFAG00000033687	POLR2F	100	89.764	Macaca_fascicularis
ENSMAMG00000008056	polr2f	83	90.566	ENSMMUG00000038231	POLR2F	87	90.566	Macaca_mulatta
ENSMAMG00000008056	polr2f	100	89.764	ENSMNEG00000044365	POLR2F	100	89.764	Macaca_nemestrina
ENSMAMG00000008056	polr2f	100	89.764	ENSMLEG00000033077	POLR2F	100	89.764	Mandrillus_leucophaeus
ENSMAMG00000008056	polr2f	100	98.425	ENSMZEG00005005705	polr2f	100	98.425	Maylandia_zebra
ENSMAMG00000008056	polr2f	100	88.976	ENSMGAG00000012504	POLR2F	100	88.976	Meleagris_gallopavo
ENSMAMG00000008056	polr2f	100	89.764	ENSMAUG00000018586	Polr2f	100	89.764	Mesocricetus_auratus
ENSMAMG00000008056	polr2f	100	89.764	ENSMICG00000013128	POLR2F	100	89.764	Microcebus_murinus
ENSMAMG00000008056	polr2f	100	89.764	ENSMOCG00000000237	Polr2f	100	89.764	Microtus_ochrogaster
ENSMAMG00000008056	polr2f	100	98.425	ENSMMOG00000005106	polr2f	100	98.425	Mola_mola
ENSMAMG00000008056	polr2f	100	88.976	ENSMODG00000019063	POLR2F	100	88.976	Monodelphis_domestica
ENSMAMG00000008056	polr2f	100	97.638	ENSMALG00000001444	polr2f	100	97.638	Monopterus_albus
ENSMAMG00000008056	polr2f	100	88.976	MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	Mus_caroli
ENSMAMG00000008056	polr2f	100	88.976	ENSMUSG00000033020	Polr2f	100	88.976	Mus_musculus
ENSMAMG00000008056	polr2f	100	88.976	MGP_PahariEiJ_G0020008	Polr2f	100	88.976	Mus_pahari
ENSMAMG00000008056	polr2f	100	88.976	MGP_SPRETEiJ_G0020904	Polr2f	100	88.976	Mus_spretus
ENSMAMG00000008056	polr2f	100	88.976	ENSMPUG00000012997	POLR2F	100	88.976	Mustela_putorius_furo
ENSMAMG00000008056	polr2f	100	87.597	ENSMLUG00000014315	-	100	87.597	Myotis_lucifugus
ENSMAMG00000008056	polr2f	98	83.871	ENSMLUG00000029612	-	98	83.871	Myotis_lucifugus
ENSMAMG00000008056	polr2f	100	89.764	ENSNGAG00000020682	Polr2f	100	89.764	Nannospalax_galili
ENSMAMG00000008056	polr2f	100	97.638	ENSNBRG00000002492	polr2f	100	97.638	Neolamprologus_brichardi
ENSMAMG00000008056	polr2f	100	89.764	ENSNLEG00000014987	-	100	89.764	Nomascus_leucogenys
ENSMAMG00000008056	polr2f	100	89.764	ENSODEG00000014123	POLR2F	100	89.764	Octodon_degus
ENSMAMG00000008056	polr2f	100	97.638	ENSONIG00000008394	polr2f	100	97.638	Oreochromis_niloticus
ENSMAMG00000008056	polr2f	100	90.551	ENSOANG00000014684	POLR2F	100	90.551	Ornithorhynchus_anatinus
ENSMAMG00000008056	polr2f	100	89.764	ENSOCUG00000012064	POLR2F	100	89.764	Oryctolagus_cuniculus
ENSMAMG00000008056	polr2f	100	96.063	ENSORLG00000014580	polr2f	100	96.063	Oryzias_latipes
ENSMAMG00000008056	polr2f	100	96.850	ENSORLG00020006910	polr2f	100	96.850	Oryzias_latipes_hni
ENSMAMG00000008056	polr2f	90	94.737	ENSORLG00015015332	polr2f	77	94.737	Oryzias_latipes_hsok
ENSMAMG00000008056	polr2f	80	94.118	ENSOMEG00000006530	polr2f	65	88.182	Oryzias_melastigma
ENSMAMG00000008056	polr2f	100	89.764	ENSOGAG00000025463	POLR2F	100	89.764	Otolemur_garnettii
ENSMAMG00000008056	polr2f	100	89.764	ENSOARG00000014692	POLR2F	100	89.764	Ovis_aries
ENSMAMG00000008056	polr2f	100	89.764	ENSPPAG00000024276	POLR2F	100	89.764	Pan_paniscus
ENSMAMG00000008056	polr2f	100	88.976	ENSPPRG00000013030	POLR2F	100	88.976	Panthera_pardus
ENSMAMG00000008056	polr2f	82	89.423	ENSPTIG00000000632	POLR2F	85	89.423	Panthera_tigris_altaica
ENSMAMG00000008056	polr2f	100	89.764	ENSPTRG00000014356	POLR2F	100	89.764	Pan_troglodytes
ENSMAMG00000008056	polr2f	100	89.764	ENSPANG00000023979	POLR2F	100	89.764	Papio_anubis
ENSMAMG00000008056	polr2f	100	96.850	ENSPKIG00000002464	polr2f	100	96.850	Paramormyrops_kingsleyae
ENSMAMG00000008056	polr2f	56	95.775	ENSPSIG00000013913	POLR2F	100	95.775	Pelodiscus_sinensis
ENSMAMG00000008056	polr2f	100	98.425	ENSPMGG00000009619	polr2f	100	98.425	Periophthalmus_magnuspinnatus
ENSMAMG00000008056	polr2f	100	89.764	ENSPEMG00000008322	Polr2f	100	89.764	Peromyscus_maniculatus_bairdii
ENSMAMG00000008056	polr2f	100	88.976	ENSPCIG00000012000	-	100	88.976	Phascolarctos_cinereus
ENSMAMG00000008056	polr2f	100	96.850	ENSPFOG00000000139	polr2f	100	96.850	Poecilia_formosa
ENSMAMG00000008056	polr2f	100	96.850	ENSPLAG00000000988	polr2f	100	96.850	Poecilia_latipinna
ENSMAMG00000008056	polr2f	100	96.850	ENSPMEG00000019063	polr2f	100	96.850	Poecilia_mexicana
ENSMAMG00000008056	polr2f	77	96.939	ENSPREG00000016749	polr2f	100	96.939	Poecilia_reticulata
ENSMAMG00000008056	polr2f	100	89.764	ENSPPYG00000011809	POLR2F	100	89.764	Pongo_abelii
ENSMAMG00000008056	polr2f	100	89.764	ENSPCOG00000025716	POLR2F	100	89.764	Propithecus_coquereli
ENSMAMG00000008056	polr2f	79	87.000	ENSPVAG00000010107	POLR2F	64	87.000	Pteropus_vampyrus
ENSMAMG00000008056	polr2f	100	98.425	ENSPNYG00000019790	polr2f	100	98.425	Pundamilia_nyererei
ENSMAMG00000008056	polr2f	100	97.638	ENSPNAG00000009017	polr2f	100	97.638	Pygocentrus_nattereri
ENSMAMG00000008056	polr2f	100	88.976	ENSRNOG00000011214	Polr2f	100	88.976	Rattus_norvegicus
ENSMAMG00000008056	polr2f	100	89.764	ENSRBIG00000044878	POLR2F	100	89.764	Rhinopithecus_bieti
ENSMAMG00000008056	polr2f	100	89.764	ENSRROG00000019586	POLR2F	100	89.764	Rhinopithecus_roxellana
ENSMAMG00000008056	polr2f	98	50.327	YPR187W	RPO26	65	63.366	Saccharomyces_cerevisiae
ENSMAMG00000008056	polr2f	100	89.764	ENSSBOG00000023340	POLR2F	100	89.764	Saimiri_boliviensis_boliviensis
ENSMAMG00000008056	polr2f	100	88.976	ENSSHAG00000008502	POLR2F	100	88.976	Sarcophilus_harrisii
ENSMAMG00000008056	polr2f	100	97.638	ENSSFOG00015012810	polr2f	100	97.638	Scleropages_formosus
ENSMAMG00000008056	polr2f	100	97.638	ENSSMAG00000005354	polr2f	100	97.638	Scophthalmus_maximus
ENSMAMG00000008056	polr2f	100	98.425	ENSSDUG00000016273	polr2f	100	98.425	Seriola_dumerili
ENSMAMG00000008056	polr2f	100	98.425	ENSSLDG00000024895	polr2f	100	98.425	Seriola_lalandi_dorsalis
ENSMAMG00000008056	polr2f	100	90.551	ENSSPUG00000011343	POLR2F	100	90.551	Sphenodon_punctatus
ENSMAMG00000008056	polr2f	100	98.425	ENSSPAG00000019646	polr2f	100	98.425	Stegastes_partitus
ENSMAMG00000008056	polr2f	100	88.976	ENSSSCG00000000116	POLR2F	100	88.976	Sus_scrofa
ENSMAMG00000008056	polr2f	57	90.278	ENSTGUG00000016504	-	88	89.610	Taeniopygia_guttata
ENSMAMG00000008056	polr2f	80	91.089	ENSTGUG00000010476	POLR2F	93	89.764	Taeniopygia_guttata
ENSMAMG00000008056	polr2f	100	97.638	ENSTRUG00000021130	polr2f	71	97.638	Takifugu_rubripes
ENSMAMG00000008056	polr2f	100	97.638	ENSTNIG00000010827	polr2f	100	97.638	Tetraodon_nigroviridis
ENSMAMG00000008056	polr2f	79	87.000	ENSTTRG00000004817	POLR2F	64	87.000	Tursiops_truncatus
ENSMAMG00000008056	polr2f	100	88.976	ENSUAMG00000020504	POLR2F	100	88.976	Ursus_americanus
ENSMAMG00000008056	polr2f	100	88.976	ENSUMAG00000015052	POLR2F	100	88.976	Ursus_maritimus
ENSMAMG00000008056	polr2f	83	89.623	ENSVVUG00000024021	POLR2F	80	89.623	Vulpes_vulpes
ENSMAMG00000008056	polr2f	100	91.339	ENSXETG00000006346	polr2f	100	91.339	Xenopus_tropicalis
ENSMAMG00000008056	polr2f	100	96.850	ENSXCOG00000015983	polr2f	100	96.850	Xiphophorus_couchianus
ENSMAMG00000008056	polr2f	100	96.850	ENSXMAG00000001559	polr2f	100	96.850	Xiphophorus_maculatus