EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000008311 (Gene tree)
Gene ID: 113124965
Gene Symbol: rcl1
Alias: zgc:109921
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 13335 bases
Position: chrOOHQ01000096.1:10406346-10419680
Accession: 113124965
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000012295	RTC	PF01137.21	3.2e-57	1	1
ENSMAMP00000012295	RTC_insert	PF05189.13	3.5e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000012623	-	5954	-	ENSMAMP00000012295	372 (aa)	XP_026153957	UPI000E45FD66

Gene Model

Click here to download ENSMAMG00000008311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000008311's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000008311	rcl1	99	79.189	ENSG00000120158	RCL1	96	85.496	Homo_sapiens
ENSMAMG00000008311	rcl1	100	91.935	ENSAPOG00000015666	rcl1	100	91.935	Acanthochromis_polyacanthus
ENSMAMG00000008311	rcl1	99	80.270	ENSAMEG00000002631	RCL1	99	80.270	Ailuropoda_melanoleuca
ENSMAMG00000008311	rcl1	100	90.591	ENSACIG00000021195	rcl1	100	90.591	Amphilophus_citrinellus
ENSMAMG00000008311	rcl1	100	91.129	ENSAOCG00000002223	rcl1	100	91.129	Amphiprion_ocellaris
ENSMAMG00000008311	rcl1	100	91.667	ENSAPEG00000006905	rcl1	100	91.667	Amphiprion_percula
ENSMAMG00000008311	rcl1	100	91.129	ENSATEG00000020026	rcl1	100	91.129	Anabas_testudineus
ENSMAMG00000008311	rcl1	88	76.292	ENSAPLG00000006031	RCL1	100	76.292	Anas_platyrhynchos
ENSMAMG00000008311	rcl1	99	74.054	ENSACAG00000003640	RCL1	99	74.054	Anolis_carolinensis
ENSMAMG00000008311	rcl1	99	78.649	ENSANAG00000037372	RCL1	99	78.649	Aotus_nancymaae
ENSMAMG00000008311	rcl1	100	90.591	ENSACLG00000021724	rcl1	100	90.591	Astatotilapia_calliptera
ENSMAMG00000008311	rcl1	99	82.609	ENSAMXG00000033394	rcl1	99	82.609	Astyanax_mexicanus
ENSMAMG00000008311	rcl1	99	45.767	WBGene00022852	ZK1127.5	99	45.767	Caenorhabditis_elegans
ENSMAMG00000008311	rcl1	99	78.919	ENSCJAG00000011202	RCL1	99	78.919	Callithrix_jacchus
ENSMAMG00000008311	rcl1	99	80.270	ENSCAFG00000002091	RCL1	99	80.270	Canis_familiaris
ENSMAMG00000008311	rcl1	99	80.270	ENSCAFG00020000638	RCL1	77	80.270	Canis_lupus_dingo
ENSMAMG00000008311	rcl1	99	78.919	ENSCHIG00000012407	RCL1	99	78.919	Capra_hircus
ENSMAMG00000008311	rcl1	88	80.793	ENSTSYG00000009592	RCL1	97	82.418	Carlito_syrichta
ENSMAMG00000008311	rcl1	67	67.456	ENSCAPG00000013575	RCL1	100	67.456	Cavia_aperea
ENSMAMG00000008311	rcl1	99	78.919	ENSCPOG00000015354	RCL1	99	78.919	Cavia_porcellus
ENSMAMG00000008311	rcl1	99	78.919	ENSCCAG00000033505	RCL1	99	78.919	Cebus_capucinus
ENSMAMG00000008311	rcl1	99	78.919	ENSCATG00000034721	RCL1	97	81.319	Cercocebus_atys
ENSMAMG00000008311	rcl1	99	79.189	ENSCLAG00000007445	RCL1	99	79.189	Chinchilla_lanigera
ENSMAMG00000008311	rcl1	99	78.919	ENSCSAG00000008811	RCL1	99	78.919	Chlorocebus_sabaeus
ENSMAMG00000008311	rcl1	86	69.279	ENSCHOG00000007216	RCL1	99	69.279	Choloepus_hoffmanni
ENSMAMG00000008311	rcl1	100	76.738	ENSCPBG00000025481	RCL1	94	77.879	Chrysemys_picta_bellii
ENSMAMG00000008311	rcl1	99	61.351	ENSCING00000019565	-	98	61.351	Ciona_intestinalis
ENSMAMG00000008311	rcl1	99	78.919	ENSCANG00000027099	RCL1	99	78.919	Colobus_angolensis_palliatus
ENSMAMG00000008311	rcl1	99	80.000	ENSCGRG00001013748	Rcl1	99	80.000	Cricetulus_griseus_chok1gshd
ENSMAMG00000008311	rcl1	88	80.851	ENSCGRG00000005843	Rcl1	99	80.851	Cricetulus_griseus_crigri
ENSMAMG00000008311	rcl1	100	88.441	ENSCSEG00000000712	rcl1	98	88.441	Cynoglossus_semilaevis
ENSMAMG00000008311	rcl1	100	91.935	ENSCVAG00000011536	rcl1	100	91.935	Cyprinodon_variegatus
ENSMAMG00000008311	rcl1	98	81.096	ENSDARG00000038312	rcl1	99	81.096	Danio_rerio
ENSMAMG00000008311	rcl1	72	80.075	ENSDNOG00000019911	RCL1	100	81.944	Dasypus_novemcinctus
ENSMAMG00000008311	rcl1	99	79.459	ENSDORG00000015645	Rcl1	99	79.459	Dipodomys_ordii
ENSMAMG00000008311	rcl1	98	53.639	FBgn0020909	Rtc1	97	54.447	Drosophila_melanogaster
ENSMAMG00000008311	rcl1	88	55.793	ENSETEG00000014087	-	100	55.793	Echinops_telfairi
ENSMAMG00000008311	rcl1	100	55.764	ENSEBUG00000016621	-	99	55.764	Eptatretus_burgeri
ENSMAMG00000008311	rcl1	99	78.919	ENSEASG00005010653	RCL1	99	78.919	Equus_asinus_asinus
ENSMAMG00000008311	rcl1	99	78.919	ENSECAG00000015973	RCL1	99	78.919	Equus_caballus
ENSMAMG00000008311	rcl1	99	68.108	ENSEEUG00000009801	RCL1	99	68.108	Erinaceus_europaeus
ENSMAMG00000008311	rcl1	100	81.989	ENSELUG00000007353	rcl1	100	81.989	Esox_lucius
ENSMAMG00000008311	rcl1	99	79.189	ENSFCAG00000014557	RCL1	99	79.189	Felis_catus
ENSMAMG00000008311	rcl1	98	70.879	ENSFALG00000010553	RCL1	96	70.879	Ficedula_albicollis
ENSMAMG00000008311	rcl1	88	78.049	ENSFDAG00000004209	RCL1	100	78.049	Fukomys_damarensis
ENSMAMG00000008311	rcl1	100	92.742	ENSFHEG00000011228	rcl1	100	92.742	Fundulus_heteroclitus
ENSMAMG00000008311	rcl1	100	83.602	ENSGMOG00000004677	rcl1	100	83.602	Gadus_morhua
ENSMAMG00000008311	rcl1	99	75.204	ENSGALG00000015024	RCL1	98	75.204	Gallus_gallus
ENSMAMG00000008311	rcl1	100	91.667	ENSGAFG00000007257	rcl1	100	91.667	Gambusia_affinis
ENSMAMG00000008311	rcl1	100	89.516	ENSGACG00000017474	rcl1	100	89.516	Gasterosteus_aculeatus
ENSMAMG00000008311	rcl1	100	76.471	ENSGAGG00000003689	RCL1	100	76.471	Gopherus_agassizii
ENSMAMG00000008311	rcl1	99	78.649	ENSGGOG00000015041	RCL1	97	80.769	Gorilla_gorilla
ENSMAMG00000008311	rcl1	100	91.129	ENSHBUG00000001393	rcl1	100	91.129	Haplochromis_burtoni
ENSMAMG00000008311	rcl1	99	65.312	ENSHGLG00000005368	-	99	65.312	Heterocephalus_glaber_female
ENSMAMG00000008311	rcl1	99	78.108	ENSHGLG00000016452	RCL1	99	78.108	Heterocephalus_glaber_female
ENSMAMG00000008311	rcl1	99	66.125	ENSHGLG00100018010	-	99	66.125	Heterocephalus_glaber_male
ENSMAMG00000008311	rcl1	99	72.703	ENSHGLG00100008718	-	99	72.703	Heterocephalus_glaber_male
ENSMAMG00000008311	rcl1	100	90.323	ENSHCOG00000020170	rcl1	100	90.323	Hippocampus_comes
ENSMAMG00000008311	rcl1	100	84.140	ENSIPUG00000018054	RCL1	100	84.140	Ictalurus_punctatus
ENSMAMG00000008311	rcl1	99	78.649	ENSSTOG00000000023	RCL1	99	78.649	Ictidomys_tridecemlineatus
ENSMAMG00000008311	rcl1	99	68.919	ENSJJAG00000015632	-	99	68.919	Jaculus_jaculus
ENSMAMG00000008311	rcl1	99	79.189	ENSJJAG00000022803	-	99	79.189	Jaculus_jaculus
ENSMAMG00000008311	rcl1	54	60.891	ENSJJAG00000000764	-	98	60.891	Jaculus_jaculus
ENSMAMG00000008311	rcl1	100	92.204	ENSKMAG00000011946	rcl1	100	92.204	Kryptolebias_marmoratus
ENSMAMG00000008311	rcl1	100	86.290	ENSLBEG00000003957	rcl1	100	86.290	Labrus_bergylta
ENSMAMG00000008311	rcl1	92	75.731	ENSLACG00000004594	RCL1	100	79.503	Latimeria_chalumnae
ENSMAMG00000008311	rcl1	100	81.720	ENSLOCG00000010148	rcl1	98	81.720	Lepisosteus_oculatus
ENSMAMG00000008311	rcl1	99	78.378	ENSLAFG00000017495	RCL1	99	78.378	Loxodonta_africana
ENSMAMG00000008311	rcl1	99	78.919	ENSMFAG00000037906	RCL1	99	78.919	Macaca_fascicularis
ENSMAMG00000008311	rcl1	99	78.919	ENSMNEG00000012288	RCL1	97	81.319	Macaca_nemestrina
ENSMAMG00000008311	rcl1	99	78.919	ENSMLEG00000043088	RCL1	99	78.919	Mandrillus_leucophaeus
ENSMAMG00000008311	rcl1	100	90.591	ENSMZEG00005017292	rcl1	100	90.591	Maylandia_zebra
ENSMAMG00000008311	rcl1	58	74.091	ENSMGAG00000002245	RCL1	100	74.091	Meleagris_gallopavo
ENSMAMG00000008311	rcl1	58	82.407	ENSMAUG00000008922	Rcl1	100	82.407	Mesocricetus_auratus
ENSMAMG00000008311	rcl1	99	79.675	ENSMICG00000015562	RCL1	99	79.675	Microcebus_murinus
ENSMAMG00000008311	rcl1	99	79.730	ENSMOCG00000012145	Rcl1	99	79.730	Microtus_ochrogaster
ENSMAMG00000008311	rcl1	100	87.936	ENSMMOG00000021264	rcl1	100	87.936	Mola_mola
ENSMAMG00000008311	rcl1	95	76.989	ENSMODG00000015377	RCL1	93	76.989	Monodelphis_domestica
ENSMAMG00000008311	rcl1	100	93.011	ENSMALG00000018618	rcl1	100	93.011	Monopterus_albus
ENSMAMG00000008311	rcl1	99	79.730	MGP_CAROLIEiJ_G0022853	Rcl1	99	79.730	Mus_caroli
ENSMAMG00000008311	rcl1	99	79.189	ENSMUSG00000024785	Rcl1	99	79.189	Mus_musculus
ENSMAMG00000008311	rcl1	99	80.000	MGP_PahariEiJ_G0014346	Rcl1	100	81.871	Mus_pahari
ENSMAMG00000008311	rcl1	99	79.189	MGP_SPRETEiJ_G0023771	Rcl1	100	81.287	Mus_spretus
ENSMAMG00000008311	rcl1	99	80.000	ENSMPUG00000004998	RCL1	99	80.000	Mustela_putorius_furo
ENSMAMG00000008311	rcl1	99	78.108	ENSMLUG00000009654	RCL1	99	78.108	Myotis_lucifugus
ENSMAMG00000008311	rcl1	99	79.189	ENSNGAG00000015327	Rcl1	99	79.189	Nannospalax_galili
ENSMAMG00000008311	rcl1	91	88.724	ENSNBRG00000019854	rcl1	100	82.834	Neolamprologus_brichardi
ENSMAMG00000008311	rcl1	99	76.757	ENSNLEG00000008891	RCL1	99	76.757	Nomascus_leucogenys
ENSMAMG00000008311	rcl1	99	71.351	ENSMEUG00000007653	RCL1	99	71.351	Notamacropus_eugenii
ENSMAMG00000008311	rcl1	99	77.568	ENSOPRG00000010965	RCL1	99	77.568	Ochotona_princeps
ENSMAMG00000008311	rcl1	88	66.869	ENSODEG00000004151	RCL1	96	66.869	Octodon_degus
ENSMAMG00000008311	rcl1	100	91.129	ENSONIG00000003871	rcl1	100	91.129	Oreochromis_niloticus
ENSMAMG00000008311	rcl1	66	77.510	ENSOANG00000013193	-	98	77.510	Ornithorhynchus_anatinus
ENSMAMG00000008311	rcl1	99	78.649	ENSOCUG00000008161	RCL1	99	78.649	Oryctolagus_cuniculus
ENSMAMG00000008311	rcl1	100	86.828	ENSORLG00000010443	rcl1	100	86.828	Oryzias_latipes
ENSMAMG00000008311	rcl1	100	87.097	ENSORLG00020012211	rcl1	100	87.097	Oryzias_latipes_hni
ENSMAMG00000008311	rcl1	100	86.559	ENSORLG00015001122	rcl1	100	86.559	Oryzias_latipes_hsok
ENSMAMG00000008311	rcl1	100	89.516	ENSOMEG00000022976	rcl1	88	89.516	Oryzias_melastigma
ENSMAMG00000008311	rcl1	99	78.649	ENSOGAG00000007480	RCL1	99	78.649	Otolemur_garnettii
ENSMAMG00000008311	rcl1	99	78.919	ENSOARG00000013463	RCL1	99	78.919	Ovis_aries
ENSMAMG00000008311	rcl1	99	78.919	ENSPPAG00000037958	RCL1	99	78.919	Pan_paniscus
ENSMAMG00000008311	rcl1	99	78.649	ENSPPRG00000022645	RCL1	99	78.649	Panthera_pardus
ENSMAMG00000008311	rcl1	88	79.511	ENSPTIG00000019031	RCL1	100	80.556	Panthera_tigris_altaica
ENSMAMG00000008311	rcl1	99	78.649	ENSPTRG00000020743	RCL1	97	81.319	Pan_troglodytes
ENSMAMG00000008311	rcl1	99	78.919	ENSPANG00000025151	RCL1	99	78.919	Papio_anubis
ENSMAMG00000008311	rcl1	100	81.452	ENSPKIG00000021022	rcl1	100	81.452	Paramormyrops_kingsleyae
ENSMAMG00000008311	rcl1	88	77.508	ENSPSIG00000012302	RCL1	100	77.508	Pelodiscus_sinensis
ENSMAMG00000008311	rcl1	100	88.441	ENSPMGG00000024007	rcl1	100	88.441	Periophthalmus_magnuspinnatus
ENSMAMG00000008311	rcl1	99	80.000	ENSPEMG00000023275	Rcl1	99	80.000	Peromyscus_maniculatus_bairdii
ENSMAMG00000008311	rcl1	99	77.297	ENSPCIG00000000188	RCL1	99	77.297	Phascolarctos_cinereus
ENSMAMG00000008311	rcl1	100	91.935	ENSPFOG00000019682	rcl1	99	91.935	Poecilia_formosa
ENSMAMG00000008311	rcl1	100	91.935	ENSPLAG00000022354	rcl1	100	91.935	Poecilia_latipinna
ENSMAMG00000008311	rcl1	100	91.935	ENSPMEG00000008131	rcl1	100	91.935	Poecilia_mexicana
ENSMAMG00000008311	rcl1	100	91.935	ENSPREG00000008032	rcl1	100	91.935	Poecilia_reticulata
ENSMAMG00000008311	rcl1	99	79.459	ENSPPYG00000019244	RCL1	99	79.459	Pongo_abelii
ENSMAMG00000008311	rcl1	99	72.432	ENSPCAG00000001440	RCL1	99	72.432	Procavia_capensis
ENSMAMG00000008311	rcl1	99	79.730	ENSPCOG00000009611	RCL1	97	81.868	Propithecus_coquereli
ENSMAMG00000008311	rcl1	99	78.649	ENSPVAG00000015752	RCL1	99	78.649	Pteropus_vampyrus
ENSMAMG00000008311	rcl1	100	90.591	ENSPNYG00000012910	rcl1	100	90.591	Pundamilia_nyererei
ENSMAMG00000008311	rcl1	99	82.880	ENSPNAG00000028307	rcl1	91	82.880	Pygocentrus_nattereri
ENSMAMG00000008311	rcl1	99	79.459	ENSRNOG00000015491	Rcl1	99	79.459	Rattus_norvegicus
ENSMAMG00000008311	rcl1	99	78.649	ENSRBIG00000035818	RCL1	99	78.649	Rhinopithecus_bieti
ENSMAMG00000008311	rcl1	99	78.919	ENSRROG00000029781	RCL1	97	81.319	Rhinopithecus_roxellana
ENSMAMG00000008311	rcl1	98	37.127	YOL010W	-	97	37.127	Saccharomyces_cerevisiae
ENSMAMG00000008311	rcl1	99	79.189	ENSSBOG00000026369	RCL1	97	81.421	Saimiri_boliviensis_boliviensis
ENSMAMG00000008311	rcl1	89	77.946	ENSSHAG00000014086	RCL1	100	77.946	Sarcophilus_harrisii
ENSMAMG00000008311	rcl1	100	81.989	ENSSFOG00015023020	rcl1	100	81.989	Scleropages_formosus
ENSMAMG00000008311	rcl1	100	91.667	ENSSMAG00000019751	rcl1	86	91.667	Scophthalmus_maximus
ENSMAMG00000008311	rcl1	100	93.011	ENSSDUG00000006349	rcl1	100	93.011	Seriola_dumerili
ENSMAMG00000008311	rcl1	100	92.742	ENSSLDG00000022076	rcl1	100	92.742	Seriola_lalandi_dorsalis
ENSMAMG00000008311	rcl1	99	78.378	ENSSARG00000009260	RCL1	99	78.378	Sorex_araneus
ENSMAMG00000008311	rcl1	99	76.757	ENSSPUG00000016330	RCL1	99	76.757	Sphenodon_punctatus
ENSMAMG00000008311	rcl1	100	93.011	ENSSPAG00000018038	rcl1	100	93.011	Stegastes_partitus
ENSMAMG00000008311	rcl1	99	79.189	ENSSSCG00000005217	RCL1	82	79.189	Sus_scrofa
ENSMAMG00000008311	rcl1	99	74.462	ENSTGUG00000005138	RCL1	99	74.462	Taeniopygia_guttata
ENSMAMG00000008311	rcl1	100	87.097	ENSTRUG00000010493	rcl1	100	87.097	Takifugu_rubripes
ENSMAMG00000008311	rcl1	100	85.215	ENSTNIG00000013214	rcl1	99	85.215	Tetraodon_nigroviridis
ENSMAMG00000008311	rcl1	99	74.595	ENSTBEG00000016339	RCL1	99	74.595	Tupaia_belangeri
ENSMAMG00000008311	rcl1	99	78.649	ENSTTRG00000016525	RCL1	99	78.649	Tursiops_truncatus
ENSMAMG00000008311	rcl1	99	80.270	ENSUAMG00000005598	RCL1	99	81.875	Ursus_americanus
ENSMAMG00000008311	rcl1	88	80.488	ENSUMAG00000017890	RCL1	97	80.488	Ursus_maritimus
ENSMAMG00000008311	rcl1	88	79.878	ENSVPAG00000009188	RCL1	100	79.878	Vicugna_pacos
ENSMAMG00000008311	rcl1	88	81.459	ENSVVUG00000007304	RCL1	89	81.459	Vulpes_vulpes
ENSMAMG00000008311	rcl1	100	71.733	ENSXETG00000000592	rcl1	100	71.733	Xenopus_tropicalis
ENSMAMG00000008311	rcl1	100	92.204	ENSXCOG00000004922	rcl1	100	92.204	Xiphophorus_couchianus
ENSMAMG00000008311	rcl1	100	92.204	ENSXMAG00000022366	RCL1	100	92.204	Xiphophorus_maculatus