EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000008472 (Gene tree)
Gene ID: 113127315
Gene Symbol: lig4
Alias: zgc:165595
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 4141 bases
Position: chrOOHQ01000099.1:3037864-3042004
Accession: 113127315
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000012498	RNA_ligase	PF09414.10	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000012828	-	3973	-	ENSMAMP00000012498	915 (aa)	XP_026157568	UPI000E456CDF

Gene Model

Click here to download ENSMAMG00000008472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000008472's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000008472	lig4	99	66.593	ENSG00000174405	LIG4	100	67.299	Homo_sapiens
ENSMAMG00000008472	lig4	99	90.440	ENSAPOG00000000866	lig4	100	90.440	Acanthochromis_polyacanthus
ENSMAMG00000008472	lig4	99	64.803	ENSAMEG00000019685	LIG4	99	64.474	Ailuropoda_melanoleuca
ENSMAMG00000008472	lig4	99	90.220	ENSACIG00000018309	lig4	100	90.220	Amphilophus_citrinellus
ENSMAMG00000008472	lig4	99	90.330	ENSAOCG00000011768	lig4	100	90.330	Amphiprion_ocellaris
ENSMAMG00000008472	lig4	99	90.549	ENSAPEG00000017815	lig4	100	90.549	Amphiprion_percula
ENSMAMG00000008472	lig4	99	90.659	ENSATEG00000005583	lig4	100	90.659	Anabas_testudineus
ENSMAMG00000008472	lig4	96	67.352	ENSAPLG00000001673	LIG4	99	67.352	Anas_platyrhynchos
ENSMAMG00000008472	lig4	99	67.403	ENSACAG00000014566	LIG4	99	67.403	Anolis_carolinensis
ENSMAMG00000008472	lig4	99	66.044	ENSANAG00000012446	LIG4	99	65.824	Aotus_nancymaae
ENSMAMG00000008472	lig4	99	88.242	ENSACLG00000027051	lig4	100	88.242	Astatotilapia_calliptera
ENSMAMG00000008472	lig4	99	80.087	ENSAMXG00000008192	lig4	95	80.087	Astyanax_mexicanus
ENSMAMG00000008472	lig4	99	65.714	ENSBTAG00000015868	LIG4	99	65.495	Bos_taurus
ENSMAMG00000008472	lig4	99	65.495	ENSCJAG00000014689	LIG4	99	65.275	Callithrix_jacchus
ENSMAMG00000008472	lig4	99	65.495	ENSCAFG00000006031	LIG4	99	65.275	Canis_familiaris
ENSMAMG00000008472	lig4	99	65.495	ENSCAFG00020021230	LIG4	99	65.275	Canis_lupus_dingo
ENSMAMG00000008472	lig4	99	65.495	ENSCHIG00000001019	LIG4	99	65.275	Capra_hircus
ENSMAMG00000008472	lig4	98	65.227	ENSCAPG00000006284	LIG4	99	65.006	Cavia_aperea
ENSMAMG00000008472	lig4	99	64.725	ENSCPOG00000014266	LIG4	99	64.505	Cavia_porcellus
ENSMAMG00000008472	lig4	99	66.154	ENSCCAG00000019971	LIG4	99	65.934	Cebus_capucinus
ENSMAMG00000008472	lig4	99	65.934	ENSCATG00000021075	LIG4	99	65.714	Cercocebus_atys
ENSMAMG00000008472	lig4	99	66.044	ENSCLAG00000003376	LIG4	99	65.824	Chinchilla_lanigera
ENSMAMG00000008472	lig4	99	65.824	ENSCSAG00000000211	LIG4	99	65.604	Chlorocebus_sabaeus
ENSMAMG00000008472	lig4	98	69.478	ENSCPBG00000023291	LIG4	100	68.928	Chrysemys_picta_bellii
ENSMAMG00000008472	lig4	70	45.732	ENSCING00000009536	-	99	45.732	Ciona_intestinalis
ENSMAMG00000008472	lig4	83	44.342	ENSCSAVG00000010336	-	98	44.342	Ciona_savignyi
ENSMAMG00000008472	lig4	99	65.824	ENSCANG00000005805	LIG4	99	65.604	Colobus_angolensis_palliatus
ENSMAMG00000008472	lig4	99	65.313	ENSCGRG00001012072	Lig4	99	65.313	Cricetulus_griseus_chok1gshd
ENSMAMG00000008472	lig4	99	65.313	ENSCGRG00000013417	Lig4	99	65.313	Cricetulus_griseus_crigri
ENSMAMG00000008472	lig4	97	85.393	ENSCSEG00000013905	lig4	97	85.393	Cynoglossus_semilaevis
ENSMAMG00000008472	lig4	99	88.694	ENSCVAG00000007896	lig4	100	88.694	Cyprinodon_variegatus
ENSMAMG00000008472	lig4	99	79.231	ENSDARG00000060620	lig4	100	79.231	Danio_rerio
ENSMAMG00000008472	lig4	99	65.423	ENSDNOG00000000513	LIG4	99	65.203	Dasypus_novemcinctus
ENSMAMG00000008472	lig4	98	66.002	ENSDORG00000027303	Lig4	99	65.891	Dipodomys_ordii
ENSMAMG00000008472	lig4	92	31.674	FBgn0030506	Lig4	93	31.674	Drosophila_melanogaster
ENSMAMG00000008472	lig4	98	63.636	ENSETEG00000015563	LIG4	100	63.858	Echinops_telfairi
ENSMAMG00000008472	lig4	99	44.802	ENSEBUG00000014243	lig4	99	44.802	Eptatretus_burgeri
ENSMAMG00000008472	lig4	99	65.165	ENSEASG00005022073	LIG4	99	65.055	Equus_asinus_asinus
ENSMAMG00000008472	lig4	99	65.055	ENSECAG00000003257	LIG4	99	64.945	Equus_caballus
ENSMAMG00000008472	lig4	98	84.205	ENSELUG00000006787	lig4	99	84.316	Esox_lucius
ENSMAMG00000008472	lig4	98	64.784	ENSFCAG00000031985	LIG4	99	64.452	Felis_catus
ENSMAMG00000008472	lig4	87	69.451	ENSFALG00000004214	LIG4	98	69.451	Ficedula_albicollis
ENSMAMG00000008472	lig4	99	65.055	ENSFDAG00000008973	LIG4	99	64.835	Fukomys_damarensis
ENSMAMG00000008472	lig4	100	88.210	ENSFHEG00000007398	lig4	91	88.210	Fundulus_heteroclitus
ENSMAMG00000008472	lig4	84	78.839	ENSGMOG00000012843	lig4	99	78.839	Gadus_morhua
ENSMAMG00000008472	lig4	99	66.593	ENSGALG00000016854	LIG4	99	66.593	Gallus_gallus
ENSMAMG00000008472	lig4	99	87.227	ENSGAFG00000019779	lig4	96	87.842	Gambusia_affinis
ENSMAMG00000008472	lig4	99	85.620	ENSGACG00000014135	lig4	100	85.620	Gasterosteus_aculeatus
ENSMAMG00000008472	lig4	99	66.374	ENSGGOG00000027771	LIG4	99	66.154	Gorilla_gorilla
ENSMAMG00000008472	lig4	99	88.022	ENSHBUG00000006245	lig4	100	88.022	Haplochromis_burtoni
ENSMAMG00000008472	lig4	99	65.165	ENSHGLG00000000718	LIG4	99	64.945	Heterocephalus_glaber_female
ENSMAMG00000008472	lig4	99	65.165	ENSHGLG00100003265	LIG4	99	64.945	Heterocephalus_glaber_male
ENSMAMG00000008472	lig4	99	84.101	ENSHCOG00000012010	lig4	100	84.101	Hippocampus_comes
ENSMAMG00000008472	lig4	99	79.451	ENSIPUG00000013748	lig4	100	79.451	Ictalurus_punctatus
ENSMAMG00000008472	lig4	99	65.385	ENSSTOG00000024303	LIG4	99	65.165	Ictidomys_tridecemlineatus
ENSMAMG00000008472	lig4	99	65.165	ENSJJAG00000006750	Lig4	99	64.835	Jaculus_jaculus
ENSMAMG00000008472	lig4	99	85.385	ENSKMAG00000001149	lig4	100	85.385	Kryptolebias_marmoratus
ENSMAMG00000008472	lig4	90	88.634	ENSLBEG00000014578	lig4	100	88.634	Labrus_bergylta
ENSMAMG00000008472	lig4	99	68.202	ENSLACG00000003282	LIG4	100	68.202	Latimeria_chalumnae
ENSMAMG00000008472	lig4	99	73.494	ENSLOCG00000008901	lig4	99	73.494	Lepisosteus_oculatus
ENSMAMG00000008472	lig4	99	64.803	ENSLAFG00000031152	LIG4	99	64.693	Loxodonta_africana
ENSMAMG00000008472	lig4	99	66.044	ENSMFAG00000037235	LIG4	99	65.824	Macaca_fascicularis
ENSMAMG00000008472	lig4	99	65.824	ENSMMUG00000008874	LIG4	99	65.604	Macaca_mulatta
ENSMAMG00000008472	lig4	99	66.044	ENSMNEG00000023575	LIG4	99	65.824	Macaca_nemestrina
ENSMAMG00000008472	lig4	99	65.714	ENSMLEG00000026720	LIG4	99	65.495	Mandrillus_leucophaeus
ENSMAMG00000008472	lig4	99	88.462	ENSMZEG00005001855	lig4	100	88.462	Maylandia_zebra
ENSMAMG00000008472	lig4	99	66.338	ENSMGAG00000015532	LIG4	100	66.338	Meleagris_gallopavo
ENSMAMG00000008472	lig4	99	64.505	ENSMOCG00000019000	Lig4	99	64.505	Microtus_ochrogaster
ENSMAMG00000008472	lig4	99	88.242	ENSMMOG00000004390	lig4	100	88.242	Mola_mola
ENSMAMG00000008472	lig4	99	66.411	ENSMODG00000025064	LIG4	99	66.301	Monodelphis_domestica
ENSMAMG00000008472	lig4	99	90.330	ENSMALG00000008555	lig4	100	90.330	Monopterus_albus
ENSMAMG00000008472	lig4	99	65.275	MGP_CAROLIEiJ_G0030809	Lig4	99	65.165	Mus_caroli
ENSMAMG00000008472	lig4	99	65.385	ENSMUSG00000049717	Lig4	99	65.275	Mus_musculus
ENSMAMG00000008472	lig4	99	65.385	MGP_PahariEiJ_G0021270	Lig4	99	65.385	Mus_pahari
ENSMAMG00000008472	lig4	99	65.385	MGP_SPRETEiJ_G0031917	Lig4	99	65.275	Mus_spretus
ENSMAMG00000008472	lig4	99	64.835	ENSMPUG00000018675	LIG4	99	64.505	Mustela_putorius_furo
ENSMAMG00000008472	lig4	99	65.604	ENSMLUG00000001267	LIG4	99	65.385	Myotis_lucifugus
ENSMAMG00000008472	lig4	98	66.224	ENSNGAG00000013258	Lig4	99	66.113	Nannospalax_galili
ENSMAMG00000008472	lig4	99	88.132	ENSNBRG00000021252	lig4	100	88.132	Neolamprologus_brichardi
ENSMAMG00000008472	lig4	99	65.495	ENSNLEG00000007888	LIG4	99	65.275	Nomascus_leucogenys
ENSMAMG00000008472	lig4	99	64.505	ENSOPRG00000005765	LIG4	99	64.396	Ochotona_princeps
ENSMAMG00000008472	lig4	99	64.725	ENSODEG00000019683	LIG4	99	64.505	Octodon_degus
ENSMAMG00000008472	lig4	100	88.415	ENSONIG00000011969	lig4	99	88.415	Oreochromis_niloticus
ENSMAMG00000008472	lig4	99	65.604	ENSOCUG00000015734	LIG4	99	65.495	Oryctolagus_cuniculus
ENSMAMG00000008472	lig4	99	84.430	ENSORLG00000004041	lig4	99	84.430	Oryzias_latipes
ENSMAMG00000008472	lig4	99	84.759	ENSORLG00020019607	lig4	99	84.759	Oryzias_latipes_hni
ENSMAMG00000008472	lig4	99	84.649	ENSORLG00015017754	lig4	99	84.649	Oryzias_latipes_hsok
ENSMAMG00000008472	lig4	75	89.520	ENSOMEG00000003459	lig4	99	89.520	Oryzias_melastigma
ENSMAMG00000008472	lig4	99	65.714	ENSOGAG00000032120	LIG4	99	65.604	Otolemur_garnettii
ENSMAMG00000008472	lig4	81	69.220	ENSOARG00000005590	LIG4	98	69.220	Ovis_aries
ENSMAMG00000008472	lig4	99	66.154	ENSPPAG00000032998	LIG4	99	65.934	Pan_paniscus
ENSMAMG00000008472	lig4	98	65.338	ENSPPRG00000017804	LIG4	99	65.006	Panthera_pardus
ENSMAMG00000008472	lig4	98	65.227	ENSPTIG00000010051	LIG4	99	64.895	Panthera_tigris_altaica
ENSMAMG00000008472	lig4	99	66.264	ENSPTRG00000006025	LIG4	99	66.044	Pan_troglodytes
ENSMAMG00000008472	lig4	99	66.044	ENSPANG00000007562	LIG4	99	65.824	Papio_anubis
ENSMAMG00000008472	lig4	99	78.462	ENSPKIG00000011645	lig4	99	78.462	Paramormyrops_kingsleyae
ENSMAMG00000008472	lig4	99	68.969	ENSPSIG00000001504	LIG4	100	68.750	Pelodiscus_sinensis
ENSMAMG00000008472	lig4	98	80.872	ENSPMGG00000013486	lig4	100	80.437	Periophthalmus_magnuspinnatus
ENSMAMG00000008472	lig4	99	64.764	ENSPEMG00000000076	Lig4	99	64.654	Peromyscus_maniculatus_bairdii
ENSMAMG00000008472	lig4	99	66.228	ENSPCIG00000021882	LIG4	99	66.118	Phascolarctos_cinereus
ENSMAMG00000008472	lig4	99	88.377	ENSPFOG00000000797	lig4	100	88.816	Poecilia_formosa
ENSMAMG00000008472	lig4	99	88.268	ENSPLAG00000001196	lig4	100	88.706	Poecilia_latipinna
ENSMAMG00000008472	lig4	99	88.268	ENSPMEG00000021353	lig4	100	88.706	Poecilia_mexicana
ENSMAMG00000008472	lig4	99	87.610	ENSPREG00000007323	lig4	100	88.048	Poecilia_reticulata
ENSMAMG00000008472	lig4	99	65.714	ENSPPYG00000005540	LIG4	99	65.495	Pongo_abelii
ENSMAMG00000008472	lig4	99	65.275	ENSPVAG00000016403	LIG4	99	64.841	Pteropus_vampyrus
ENSMAMG00000008472	lig4	99	88.242	ENSPNYG00000009660	lig4	100	88.242	Pundamilia_nyererei
ENSMAMG00000008472	lig4	98	82.274	ENSPNAG00000028056	lig4	99	82.274	Pygocentrus_nattereri
ENSMAMG00000008472	lig4	98	82.274	ENSPNAG00000028069	LIG4	99	82.274	Pygocentrus_nattereri
ENSMAMG00000008472	lig4	99	65.495	ENSRNOG00000014605	Lig4	99	65.385	Rattus_norvegicus
ENSMAMG00000008472	lig4	99	64.945	ENSRBIG00000039962	LIG4	99	64.725	Rhinopithecus_bieti
ENSMAMG00000008472	lig4	99	66.044	ENSRROG00000006040	LIG4	99	65.824	Rhinopithecus_roxellana
ENSMAMG00000008472	lig4	99	65.604	ENSSBOG00000019029	LIG4	99	65.385	Saimiri_boliviensis_boliviensis
ENSMAMG00000008472	lig4	99	64.435	ENSSHAG00000009525	LIG4	99	64.325	Sarcophilus_harrisii
ENSMAMG00000008472	lig4	99	79.670	ENSSFOG00015012835	lig4	100	79.670	Scleropages_formosus
ENSMAMG00000008472	lig4	99	84.835	ENSSMAG00000011267	lig4	100	84.835	Scophthalmus_maximus
ENSMAMG00000008472	lig4	99	90.372	ENSSDUG00000010343	lig4	100	90.372	Seriola_dumerili
ENSMAMG00000008472	lig4	99	88.512	ENSSLDG00000003239	lig4	100	88.512	Seriola_lalandi_dorsalis
ENSMAMG00000008472	lig4	99	63.746	ENSSARG00000006573	LIG4	99	63.636	Sorex_araneus
ENSMAMG00000008472	lig4	92	69.524	ENSSPUG00000002444	LIG4	100	69.405	Sphenodon_punctatus
ENSMAMG00000008472	lig4	99	90.110	ENSSPAG00000001609	lig4	100	90.110	Stegastes_partitus
ENSMAMG00000008472	lig4	99	65.237	ENSSSCG00000009540	LIG4	99	64.906	Sus_scrofa
ENSMAMG00000008472	lig4	99	66.961	ENSTGUG00000010795	LIG4	99	66.961	Taeniopygia_guttata
ENSMAMG00000008472	lig4	99	87.033	ENSTRUG00000009984	lig4	100	87.033	Takifugu_rubripes
ENSMAMG00000008472	lig4	99	84.176	ENSTNIG00000010348	lig4	100	84.396	Tetraodon_nigroviridis
ENSMAMG00000008472	lig4	99	65.714	ENSTBEG00000017741	LIG4	99	65.714	Tupaia_belangeri
ENSMAMG00000008472	lig4	99	64.725	ENSTTRG00000012660	LIG4	99	64.505	Tursiops_truncatus
ENSMAMG00000008472	lig4	99	64.396	ENSUAMG00000003773	LIG4	99	64.066	Ursus_americanus
ENSMAMG00000008472	lig4	99	67.434	ENSXETG00000002654	lig4	100	67.434	Xenopus_tropicalis
ENSMAMG00000008472	lig4	99	87.610	ENSXCOG00000017401	lig4	100	88.048	Xiphophorus_couchianus
ENSMAMG00000008472	lig4	99	88.048	ENSXMAG00000015142	lig4	99	88.487	Xiphophorus_maculatus