EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000008525 (Gene tree)
Gene ID: 113133334
Gene Symbol: rbm28
Alias: zgc:56258
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 8882 bases
Position: chrOOHQ01000074.1:24210608-24219489
Accession: 113133334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000012588	RRM_1	PF00076.22	1.9e-55	1	3
ENSMAMP00000012588	RRM_1	PF00076.22	1.9e-55	2	3
ENSMAMP00000012588	RRM_1	PF00076.22	1.9e-55	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000012920	-	4824	-	ENSMAMP00000012588	751 (aa)	XP_026167873	UPI000E45C16B

Gene Model

Click here to download ENSMAMG00000008525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000008525's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000008525	rbm28	100	50.444	ENSG00000106344	RBM28	100	62.500	Homo_sapiens
ENSMAMG00000008525	rbm28	58	77.273	ENSAPOG00000015512	rbm28	100	71.244	Acanthochromis_polyacanthus
ENSMAMG00000008525	rbm28	97	60.920	ENSAMEG00000004776	RBM28	90	61.538	Ailuropoda_melanoleuca
ENSMAMG00000008525	rbm28	56	74.109	ENSACIG00000023153	rbm28	91	74.232	Amphilophus_citrinellus
ENSMAMG00000008525	rbm28	58	78.182	ENSAOCG00000000462	rbm28	100	72.763	Amphiprion_ocellaris
ENSMAMG00000008525	rbm28	100	71.782	ENSAPEG00000012996	rbm28	100	72.952	Amphiprion_percula
ENSMAMG00000008525	rbm28	92	71.488	ENSATEG00000001672	rbm28	100	67.826	Anabas_testudineus
ENSMAMG00000008525	rbm28	100	50.448	ENSANAG00000033922	RBM28	100	62.500	Aotus_nancymaae
ENSMAMG00000008525	rbm28	100	68.855	ENSACLG00000025024	rbm28	100	69.191	Astatotilapia_calliptera
ENSMAMG00000008525	rbm28	58	62.471	ENSAMXG00000000763	rbm28	99	62.700	Astyanax_mexicanus
ENSMAMG00000008525	rbm28	63	62.500	ENSBTAG00000017001	RBM28	100	62.500	Bos_taurus
ENSMAMG00000008525	rbm28	100	49.936	ENSCJAG00000017731	RBM28	100	62.500	Callithrix_jacchus
ENSMAMG00000008525	rbm28	100	51.953	ENSCAFG00000001667	RBM28	100	51.157	Canis_familiaris
ENSMAMG00000008525	rbm28	100	51.953	ENSCAFG00020021648	RBM28	100	51.157	Canis_lupus_dingo
ENSMAMG00000008525	rbm28	100	52.078	ENSCHIG00000014146	RBM28	100	51.658	Capra_hircus
ENSMAMG00000008525	rbm28	66	65.000	ENSTSYG00000002892	RBM28	100	65.000	Carlito_syrichta
ENSMAMG00000008525	rbm28	77	41.455	ENSCAPG00000013218	RBM28	91	42.215	Cavia_aperea
ENSMAMG00000008525	rbm28	100	51.166	ENSCPOG00000006253	RBM28	100	50.888	Cavia_porcellus
ENSMAMG00000008525	rbm28	100	50.510	ENSCCAG00000035105	RBM28	100	62.500	Cebus_capucinus
ENSMAMG00000008525	rbm28	100	50.192	ENSCATG00000040497	RBM28	100	62.500	Cercocebus_atys
ENSMAMG00000008525	rbm28	100	48.105	ENSCLAG00000003707	RBM28	100	48.087	Chinchilla_lanigera
ENSMAMG00000008525	rbm28	100	50.510	ENSCSAG00000010161	RBM28	100	50.440	Chlorocebus_sabaeus
ENSMAMG00000008525	rbm28	56	59.677	ENSCHOG00000001994	-	63	59.677	Choloepus_hoffmanni
ENSMAMG00000008525	rbm28	50	50.691	ENSCPBG00000018088	RBM28	76	52.334	Chrysemys_picta_bellii
ENSMAMG00000008525	rbm28	96	38.462	ENSCING00000009238	-	84	38.462	Ciona_intestinalis
ENSMAMG00000008525	rbm28	89	50.447	ENSCANG00000038397	RBM28	97	62.500	Colobus_angolensis_palliatus
ENSMAMG00000008525	rbm28	65	54.379	ENSCGRG00001021278	Rbm28	100	50.123	Cricetulus_griseus_chok1gshd
ENSMAMG00000008525	rbm28	100	51.866	ENSCGRG00000005098	Rbm28	100	51.075	Cricetulus_griseus_crigri
ENSMAMG00000008525	rbm28	100	66.184	ENSCSEG00000004212	rbm28	100	66.184	Cynoglossus_semilaevis
ENSMAMG00000008525	rbm28	59	77.162	ENSCVAG00000010493	rbm28	99	67.183	Cyprinodon_variegatus
ENSMAMG00000008525	rbm28	86	59.424	ENSDARG00000025332	rbm28	99	54.455	Danio_rerio
ENSMAMG00000008525	rbm28	100	51.020	ENSDNOG00000001124	RBM28	100	50.126	Dasypus_novemcinctus
ENSMAMG00000008525	rbm28	63	53.049	ENSDORG00000004184	Rbm28	86	56.278	Dipodomys_ordii
ENSMAMG00000008525	rbm28	67	36.986	FBgn0260456	CG4806	71	36.791	Drosophila_melanogaster
ENSMAMG00000008525	rbm28	100	47.112	ENSETEG00000007130	RBM28	56	50.577	Echinops_telfairi
ENSMAMG00000008525	rbm28	64	53.799	ENSEASG00005008528	RBM28	100	51.414	Equus_asinus_asinus
ENSMAMG00000008525	rbm28	64	53.593	ENSECAG00000007745	RBM28	100	49.875	Equus_caballus
ENSMAMG00000008525	rbm28	100	47.613	ENSEEUG00000002389	RBM28	100	47.037	Erinaceus_europaeus
ENSMAMG00000008525	rbm28	100	59.748	ENSELUG00000020602	rbm28	99	60.124	Esox_lucius
ENSMAMG00000008525	rbm28	100	52.375	ENSFCAG00000000946	RBM28	100	62.500	Felis_catus
ENSMAMG00000008525	rbm28	100	51.355	ENSFDAG00000010169	RBM28	100	51.362	Fukomys_damarensis
ENSMAMG00000008525	rbm28	99	58.189	ENSGMOG00000007091	rbm28	99	58.000	Gadus_morhua
ENSMAMG00000008525	rbm28	59	72.124	ENSGAFG00000004802	rbm28	98	72.124	Gambusia_affinis
ENSMAMG00000008525	rbm28	58	74.541	ENSGACG00000012612	rbm28	100	65.785	Gasterosteus_aculeatus
ENSMAMG00000008525	rbm28	70	63.636	ENSGAGG00000008873	RBM28	87	59.500	Gopherus_agassizii
ENSMAMG00000008525	rbm28	95	50.272	ENSGGOG00000004644	RBM28	97	50.000	Gorilla_gorilla
ENSMAMG00000008525	rbm28	94	68.886	ENSHBUG00000009611	rbm28	99	68.690	Haplochromis_burtoni
ENSMAMG00000008525	rbm28	100	51.226	ENSHGLG00000005409	RBM28	100	50.900	Heterocephalus_glaber_female
ENSMAMG00000008525	rbm28	100	51.226	ENSHGLG00100016458	RBM28	100	50.900	Heterocephalus_glaber_male
ENSMAMG00000008525	rbm28	83	58.315	ENSHCOG00000010597	rbm28	100	49.744	Hippocampus_comes
ENSMAMG00000008525	rbm28	61	48.608	ENSIPUG00000007103	rbm28	81	51.049	Ictalurus_punctatus
ENSMAMG00000008525	rbm28	100	49.873	ENSSTOG00000002169	RBM28	100	49.811	Ictidomys_tridecemlineatus
ENSMAMG00000008525	rbm28	100	48.745	ENSJJAG00000022400	Rbm28	100	48.021	Jaculus_jaculus
ENSMAMG00000008525	rbm28	99	66.273	ENSKMAG00000013348	rbm28	99	67.016	Kryptolebias_marmoratus
ENSMAMG00000008525	rbm28	59	74.723	ENSLBEG00000012998	rbm28	100	68.838	Labrus_bergylta
ENSMAMG00000008525	rbm28	73	49.233	ENSLACG00000010485	-	99	50.783	Latimeria_chalumnae
ENSMAMG00000008525	rbm28	99	54.338	ENSLOCG00000015541	rbm28	78	64.253	Lepisosteus_oculatus
ENSMAMG00000008525	rbm28	100	50.706	ENSLAFG00000010717	RBM28	100	50.190	Loxodonta_africana
ENSMAMG00000008525	rbm28	100	50.129	ENSMFAG00000031036	RBM28	100	62.500	Macaca_fascicularis
ENSMAMG00000008525	rbm28	100	50.452	ENSMMUG00000007250	RBM28	100	62.500	Macaca_mulatta
ENSMAMG00000008525	rbm28	100	50.852	ENSMNEG00000036970	RBM28	100	62.500	Macaca_nemestrina
ENSMAMG00000008525	rbm28	80	50.833	ENSMLEG00000037717	RBM28	95	50.505	Mandrillus_leucophaeus
ENSMAMG00000008525	rbm28	93	67.818	ENSMZEG00005019625	rbm28	100	68.163	Maylandia_zebra
ENSMAMG00000008525	rbm28	100	50.886	ENSMAUG00000002263	Rbm28	100	51.279	Mesocricetus_auratus
ENSMAMG00000008525	rbm28	64	53.200	ENSMICG00000000107	RBM28	60	56.167	Microcebus_murinus
ENSMAMG00000008525	rbm28	100	51.083	ENSMOCG00000014615	Rbm28	100	51.279	Microtus_ochrogaster
ENSMAMG00000008525	rbm28	59	70.682	ENSMMOG00000008600	rbm28	91	70.682	Mola_mola
ENSMAMG00000008525	rbm28	100	51.226	ENSMODG00000015151	RBM28	100	51.546	Monodelphis_domestica
ENSMAMG00000008525	rbm28	100	74.219	ENSMALG00000006419	rbm28	100	74.122	Monopterus_albus
ENSMAMG00000008525	rbm28	100	50.713	MGP_CAROLIEiJ_G0028162	Rbm28	100	50.900	Mus_caroli
ENSMAMG00000008525	rbm28	100	52.461	ENSMUSG00000029701	Rbm28	100	52.062	Mus_musculus
ENSMAMG00000008525	rbm28	100	51.480	MGP_PahariEiJ_G0021920	Rbm28	100	51.733	Mus_pahari
ENSMAMG00000008525	rbm28	100	52.202	MGP_SPRETEiJ_G0029162	Rbm28	100	51.804	Mus_spretus
ENSMAMG00000008525	rbm28	100	52.326	ENSMPUG00000006511	RBM28	100	51.641	Mustela_putorius_furo
ENSMAMG00000008525	rbm28	100	51.020	ENSMLUG00000002186	RBM28	100	50.820	Myotis_lucifugus
ENSMAMG00000008525	rbm28	100	52.042	ENSNGAG00000006480	-	100	52.294	Nannospalax_galili
ENSMAMG00000008525	rbm28	100	50.777	ENSNGAG00000017946	-	100	48.969	Nannospalax_galili
ENSMAMG00000008525	rbm28	100	50.442	ENSNLEG00000012307	RBM28	100	62.500	Nomascus_leucogenys
ENSMAMG00000008525	rbm28	81	62.893	ENSMEUG00000009611	RBM28	83	62.893	Notamacropus_eugenii
ENSMAMG00000008525	rbm28	84	50.482	ENSOPRG00000015140	RBM28	83	50.279	Ochotona_princeps
ENSMAMG00000008525	rbm28	100	50.000	ENSODEG00000003213	-	100	49.936	Octodon_degus
ENSMAMG00000008525	rbm28	89	47.640	ENSODEG00000013217	-	81	58.684	Octodon_degus
ENSMAMG00000008525	rbm28	59	73.866	ENSONIG00000014924	rbm28	100	69.103	Oreochromis_niloticus
ENSMAMG00000008525	rbm28	100	48.586	ENSOANG00000000815	-	59	51.204	Ornithorhynchus_anatinus
ENSMAMG00000008525	rbm28	100	50.960	ENSOCUG00000003009	RBM28	100	50.000	Oryctolagus_cuniculus
ENSMAMG00000008525	rbm28	99	64.020	ENSORLG00000009636	rbm28	99	65.104	Oryzias_latipes
ENSMAMG00000008525	rbm28	99	64.036	ENSORLG00020002123	rbm28	99	65.059	Oryzias_latipes_hni
ENSMAMG00000008525	rbm28	86	72.072	ENSORLG00015015030	rbm28	98	72.072	Oryzias_latipes_hsok
ENSMAMG00000008525	rbm28	59	73.289	ENSOMEG00000007801	rbm28	100	66.667	Oryzias_melastigma
ENSMAMG00000008525	rbm28	81	60.000	ENSOGAG00000006011	RBM28	100	60.000	Otolemur_garnettii
ENSMAMG00000008525	rbm28	100	52.146	ENSOARG00000002547	RBM28	100	51.724	Ovis_aries
ENSMAMG00000008525	rbm28	100	50.442	ENSPPAG00000041730	RBM28	100	62.500	Pan_paniscus
ENSMAMG00000008525	rbm28	100	51.861	ENSPPRG00000004420	RBM28	100	62.500	Panthera_pardus
ENSMAMG00000008525	rbm28	100	52.246	ENSPTIG00000008550	RBM28	100	62.500	Panthera_tigris_altaica
ENSMAMG00000008525	rbm28	100	50.316	ENSPTRG00000019659	RBM28	100	62.500	Pan_troglodytes
ENSMAMG00000008525	rbm28	100	50.381	ENSPANG00000022295	RBM28	100	62.500	Papio_anubis
ENSMAMG00000008525	rbm28	99	55.514	ENSPKIG00000023453	rbm28	99	53.837	Paramormyrops_kingsleyae
ENSMAMG00000008525	rbm28	85	67.431	ENSPMGG00000012840	rbm28	98	67.294	Periophthalmus_magnuspinnatus
ENSMAMG00000008525	rbm28	100	51.519	ENSPEMG00000020673	Rbm28	100	51.242	Peromyscus_maniculatus_bairdii
ENSMAMG00000008525	rbm28	100	51.047	ENSPCIG00000012810	RBM28	100	50.968	Phascolarctos_cinereus
ENSMAMG00000008525	rbm28	59	73.894	ENSPFOG00000018209	rbm28	100	65.674	Poecilia_formosa
ENSMAMG00000008525	rbm28	99	65.971	ENSPLAG00000016078	rbm28	96	66.362	Poecilia_latipinna
ENSMAMG00000008525	rbm28	94	64.344	ENSPMEG00000004292	rbm28	100	65.718	Poecilia_mexicana
ENSMAMG00000008525	rbm28	99	65.274	ENSPREG00000014287	rbm28	99	66.319	Poecilia_reticulata
ENSMAMG00000008525	rbm28	100	50.446	ENSPPYG00000017975	RBM28	100	50.441	Pongo_abelii
ENSMAMG00000008525	rbm28	74	52.113	ENSPCAG00000008223	RBM28	83	51.934	Procavia_capensis
ENSMAMG00000008525	rbm28	69	62.500	ENSPCOG00000016797	RBM28	100	62.500	Propithecus_coquereli
ENSMAMG00000008525	rbm28	74	63.679	ENSPVAG00000005443	RBM28	70	65.672	Pteropus_vampyrus
ENSMAMG00000008525	rbm28	100	68.726	ENSPNYG00000014003	rbm28	100	69.060	Pundamilia_nyererei
ENSMAMG00000008525	rbm28	100	51.252	ENSRNOG00000005468	Rbm28	100	50.639	Rattus_norvegicus
ENSMAMG00000008525	rbm28	100	50.506	ENSRBIG00000033990	RBM28	100	62.500	Rhinopithecus_bieti
ENSMAMG00000008525	rbm28	100	50.570	ENSRROG00000040747	RBM28	100	62.500	Rhinopithecus_roxellana
ENSMAMG00000008525	rbm28	85	47.194	ENSSBOG00000012308	RBM28	100	47.132	Saimiri_boliviensis_boliviensis
ENSMAMG00000008525	rbm28	96	49.660	ENSSHAG00000017017	RBM28	98	48.999	Sarcophilus_harrisii
ENSMAMG00000008525	rbm28	99	57.503	ENSSFOG00015001231	rbm28	99	57.386	Scleropages_formosus
ENSMAMG00000008525	rbm28	59	71.715	ENSSMAG00000003885	rbm28	90	72.036	Scophthalmus_maximus
ENSMAMG00000008525	rbm28	59	81.457	ENSSDUG00000014270	rbm28	93	79.583	Seriola_dumerili
ENSMAMG00000008525	rbm28	100	72.258	ENSSLDG00000020099	rbm28	100	73.419	Seriola_lalandi_dorsalis
ENSMAMG00000008525	rbm28	72	59.367	ENSSARG00000008303	RBM28	78	58.718	Sorex_araneus
ENSMAMG00000008525	rbm28	67	60.294	ENSSPUG00000000838	RBM28	80	60.294	Sphenodon_punctatus
ENSMAMG00000008525	rbm28	58	78.104	ENSSPAG00000023305	rbm28	100	70.999	Stegastes_partitus
ENSMAMG00000008525	rbm28	100	51.680	ENSSSCG00000031847	RBM28	100	51.018	Sus_scrofa
ENSMAMG00000008525	rbm28	100	63.030	ENSTRUG00000013311	rbm28	99	63.543	Takifugu_rubripes
ENSMAMG00000008525	rbm28	99	62.008	ENSTNIG00000017962	rbm28	99	61.881	Tetraodon_nigroviridis
ENSMAMG00000008525	rbm28	81	56.604	ENSTBEG00000012749	RBM28	82	55.927	Tupaia_belangeri
ENSMAMG00000008525	rbm28	100	51.088	ENSTTRG00000013647	RBM28	58	55.947	Tursiops_truncatus
ENSMAMG00000008525	rbm28	100	48.124	ENSUAMG00000006949	RBM28	100	47.257	Ursus_americanus
ENSMAMG00000008525	rbm28	100	51.535	ENSUMAG00000005997	RBM28	100	50.380	Ursus_maritimus
ENSMAMG00000008525	rbm28	85	46.596	ENSVPAG00000008304	RBM28	88	46.076	Vicugna_pacos
ENSMAMG00000008525	rbm28	100	51.042	ENSVVUG00000007270	RBM28	100	50.514	Vulpes_vulpes
ENSMAMG00000008525	rbm28	100	48.923	ENSXETG00000009271	rbm28	100	48.982	Xenopus_tropicalis
ENSMAMG00000008525	rbm28	59	67.627	ENSXCOG00000020357	rbm28	92	68.071	Xiphophorus_couchianus
ENSMAMG00000008525	rbm28	99	66.316	ENSXMAG00000004415	rbm28	99	66.447	Xiphophorus_maculatus