EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000008633 (Gene tree)
Gene ID: 113143959
Gene Symbol: xrn2
Alias: wu:fb38g12|wu:fj53d06|zgc:55717
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 29385 bases
Position: chrOOHQ01000070.1:4159-33543
Accession: ZDB-GENE-040426-2874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000012766	XRN_N	PF03159.18	3e-101	1	1
ENSMAMP00000012733	XRN_N	PF03159.18	3.2e-101	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000013112	-	3557	-	ENSMAMP00000012766	951 (aa)	-	-
ENSMAMT00000013077	-	3602	-	ENSMAMP00000012733	966 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000008633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000008633's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000008633	xrn2	71	41.778	ENSMAMG00000013219	xrn1	92	39.665

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000008633	xrn2	98	71.069	ENSG00000088930	XRN2	95	72.579	Homo_sapiens
ENSMAMG00000008633	xrn2	99	90.377	ENSAPOG00000009818	xrn2	98	90.586	Acanthochromis_polyacanthus
ENSMAMG00000008633	xrn2	98	71.279	ENSAMEG00000012581	XRN2	95	72.797	Ailuropoda_melanoleuca
ENSMAMG00000008633	xrn2	90	83.446	ENSACIG00000015047	xrn2	95	88.168	Amphilophus_citrinellus
ENSMAMG00000008633	xrn2	99	90.900	ENSAOCG00000023632	xrn2	98	91.423	Amphiprion_ocellaris
ENSMAMG00000008633	xrn2	99	90.909	ENSAPEG00000014871	xrn2	98	91.118	Amphiprion_percula
ENSMAMG00000008633	xrn2	99	91.867	ENSATEG00000001273	xrn2	100	92.075	Anabas_testudineus
ENSMAMG00000008633	xrn2	93	72.179	ENSAPLG00000013869	XRN2	90	75.329	Anas_platyrhynchos
ENSMAMG00000008633	xrn2	99	70.546	ENSACAG00000005565	XRN2	96	72.216	Anolis_carolinensis
ENSMAMG00000008633	xrn2	98	70.951	ENSANAG00000020126	XRN2	95	72.470	Aotus_nancymaae
ENSMAMG00000008633	xrn2	90	88.249	ENSACLG00000010522	xrn2	98	88.249	Astatotilapia_calliptera
ENSMAMG00000008633	xrn2	97	82.650	ENSAMXG00000018301	xrn2	95	82.703	Astyanax_mexicanus
ENSMAMG00000008633	xrn2	98	70.693	ENSBTAG00000011304	XRN2	95	72.192	Bos_taurus
ENSMAMG00000008633	xrn2	86	54.322	WBGene00006964	xrn-2	88	53.998	Caenorhabditis_elegans
ENSMAMG00000008633	xrn2	98	71.069	ENSCJAG00000005611	XRN2	95	72.579	Callithrix_jacchus
ENSMAMG00000008633	xrn2	98	71.504	ENSCAFG00000005185	XRN2	95	73.035	Canis_familiaris
ENSMAMG00000008633	xrn2	98	71.504	ENSCAFG00020027479	XRN2	95	73.035	Canis_lupus_dingo
ENSMAMG00000008633	xrn2	98	70.693	ENSCHIG00000006921	XRN2	95	72.192	Capra_hircus
ENSMAMG00000008633	xrn2	98	70.947	ENSTSYG00000008315	XRN2	95	72.459	Carlito_syrichta
ENSMAMG00000008633	xrn2	96	59.768	ENSCAPG00000010773	XRN2	95	61.211	Cavia_aperea
ENSMAMG00000008633	xrn2	98	71.698	ENSCPOG00000009407	XRN2	95	73.232	Cavia_porcellus
ENSMAMG00000008633	xrn2	99	70.729	ENSCATG00000040350	XRN2	96	72.470	Cercocebus_atys
ENSMAMG00000008633	xrn2	98	71.488	ENSCLAG00000013419	XRN2	95	73.014	Chinchilla_lanigera
ENSMAMG00000008633	xrn2	98	70.964	ENSCSAG00000011094	XRN2	95	72.470	Chlorocebus_sabaeus
ENSMAMG00000008633	xrn2	60	88.710	ENSCHOG00000013404	XRN2	63	88.710	Choloepus_hoffmanni
ENSMAMG00000008633	xrn2	95	72.903	ENSCPBG00000023533	XRN2	95	72.777	Chrysemys_picta_bellii
ENSMAMG00000008633	xrn2	86	59.929	ENSCING00000022336	-	100	60.812	Ciona_intestinalis
ENSMAMG00000008633	xrn2	80	70.233	ENSCSAVG00000011217	-	100	62.835	Ciona_savignyi
ENSMAMG00000008633	xrn2	98	70.964	ENSCANG00000040240	XRN2	95	72.470	Colobus_angolensis_palliatus
ENSMAMG00000008633	xrn2	96	72.961	ENSCGRG00001010676	Xrn2	97	73.632	Cricetulus_griseus_chok1gshd
ENSMAMG00000008633	xrn2	95	70.874	ENSCGRG00000006378	Xrn2	95	72.422	Cricetulus_griseus_crigri
ENSMAMG00000008633	xrn2	53	83.399	ENSCSEG00000005628	xrn2	100	83.202	Cynoglossus_semilaevis
ENSMAMG00000008633	xrn2	90	85.975	ENSCVAG00000018999	xrn2	98	93.308	Cyprinodon_variegatus
ENSMAMG00000008633	xrn2	99	79.321	ENSDARG00000101900	xrn2	96	87.023	Danio_rerio
ENSMAMG00000008633	xrn2	98	71.714	ENSDNOG00000001895	XRN2	95	72.905	Dasypus_novemcinctus
ENSMAMG00000008633	xrn2	98	70.242	ENSDORG00000005434	Xrn2	95	71.382	Dipodomys_ordii
ENSMAMG00000008633	xrn2	86	56.410	FBgn0031868	Rat1	99	53.290	Drosophila_melanogaster
ENSMAMG00000008633	xrn2	98	63.242	ENSETEG00000001740	XRN2	87	81.265	Echinops_telfairi
ENSMAMG00000008633	xrn2	84	69.212	ENSEBUG00000016136	xrn2	100	69.212	Eptatretus_burgeri
ENSMAMG00000008633	xrn2	98	71.188	ENSEASG00005002484	XRN2	95	72.707	Equus_asinus_asinus
ENSMAMG00000008633	xrn2	93	88.462	ENSECAG00000018988	XRN2	92	88.462	Equus_caballus
ENSMAMG00000008633	xrn2	67	92.000	ENSEEUG00000009265	XRN2	67	92.000	Erinaceus_europaeus
ENSMAMG00000008633	xrn2	96	83.423	ENSELUG00000000552	xrn2	94	84.101	Esox_lucius
ENSMAMG00000008633	xrn2	98	71.069	ENSFCAG00000007970	XRN2	95	72.579	Felis_catus
ENSMAMG00000008633	xrn2	95	71.932	ENSFALG00000004508	XRN2	90	76.368	Ficedula_albicollis
ENSMAMG00000008633	xrn2	98	71.384	ENSFDAG00000016311	XRN2	95	72.905	Fukomys_damarensis
ENSMAMG00000008633	xrn2	54	84.674	ENSFHEG00000013039	xrn2	98	84.674	Fundulus_heteroclitus
ENSMAMG00000008633	xrn2	85	82.029	ENSGMOG00000013436	xrn2	100	82.029	Gadus_morhua
ENSMAMG00000008633	xrn2	97	71.140	ENSGALG00000008372	XRN2	90	75.204	Gallus_gallus
ENSMAMG00000008633	xrn2	90	88.377	ENSGAFG00000014284	xrn2	99	88.377	Gambusia_affinis
ENSMAMG00000008633	xrn2	87	86.925	ENSGACG00000011870	xrn2	96	91.555	Gasterosteus_aculeatus
ENSMAMG00000008633	xrn2	95	72.845	ENSGAGG00000004884	XRN2	95	73.210	Gopherus_agassizii
ENSMAMG00000008633	xrn2	98	70.964	ENSGGOG00000013738	XRN2	95	72.470	Gorilla_gorilla
ENSMAMG00000008633	xrn2	54	88.506	ENSHBUG00000005077	xrn2	94	88.506	Haplochromis_burtoni
ENSMAMG00000008633	xrn2	98	70.335	ENSHGLG00000014831	XRN2	95	71.817	Heterocephalus_glaber_female
ENSMAMG00000008633	xrn2	98	70.335	ENSHGLG00100013130	XRN2	95	71.817	Heterocephalus_glaber_male
ENSMAMG00000008633	xrn2	99	82.834	ENSHCOG00000011994	xrn2	95	84.204	Hippocampus_comes
ENSMAMG00000008633	xrn2	98	80.622	ENSIPUG00000006639	xrn2	96	81.828	Ictalurus_punctatus
ENSMAMG00000008633	xrn2	98	71.488	ENSSTOG00000000589	XRN2	95	73.014	Ictidomys_tridecemlineatus
ENSMAMG00000008633	xrn2	98	71.293	ENSJJAG00000022128	Xrn2	95	73.014	Jaculus_jaculus
ENSMAMG00000008633	xrn2	53	91.107	ENSLBEG00000010041	xrn2	100	91.107	Labrus_bergylta
ENSMAMG00000008633	xrn2	93	72.319	ENSLACG00000008307	XRN2	98	75.990	Latimeria_chalumnae
ENSMAMG00000008633	xrn2	98	75.607	ENSLOCG00000016874	xrn2	93	82.598	Lepisosteus_oculatus
ENSMAMG00000008633	xrn2	98	71.488	ENSLAFG00000014624	XRN2	95	73.014	Loxodonta_africana
ENSMAMG00000008633	xrn2	98	70.964	ENSMFAG00000038122	XRN2	95	72.470	Macaca_fascicularis
ENSMAMG00000008633	xrn2	98	70.964	ENSMMUG00000011405	XRN2	95	72.470	Macaca_mulatta
ENSMAMG00000008633	xrn2	98	70.860	ENSMNEG00000040626	XRN2	95	72.361	Macaca_nemestrina
ENSMAMG00000008633	xrn2	98	70.860	ENSMLEG00000041897	XRN2	95	72.361	Mandrillus_leucophaeus
ENSMAMG00000008633	xrn2	90	90.092	ENSMZEG00005022362	xrn2	98	90.092	Maylandia_zebra
ENSMAMG00000008633	xrn2	97	70.732	ENSMGAG00000003196	XRN2	90	74.739	Meleagris_gallopavo
ENSMAMG00000008633	xrn2	98	72.392	ENSMAUG00000021842	Xrn2	95	73.961	Mesocricetus_auratus
ENSMAMG00000008633	xrn2	98	71.083	ENSMICG00000008126	XRN2	95	72.361	Microcebus_murinus
ENSMAMG00000008633	xrn2	98	71.504	ENSMOCG00000012588	Xrn2	95	73.035	Microtus_ochrogaster
ENSMAMG00000008633	xrn2	90	88.750	ENSMMOG00000017576	xrn2	97	88.362	Mola_mola
ENSMAMG00000008633	xrn2	96	72.629	ENSMODG00000006163	XRN2	96	73.115	Monodelphis_domestica
ENSMAMG00000008633	xrn2	90	90.330	ENSMALG00000011355	xrn2	95	94.626	Monopterus_albus
ENSMAMG00000008633	xrn2	97	72.825	MGP_CAROLIEiJ_G0024400	Xrn2	95	73.407	Mus_caroli
ENSMAMG00000008633	xrn2	97	72.825	ENSMUSG00000027433	Xrn2	95	73.407	Mus_musculus
ENSMAMG00000008633	xrn2	97	72.718	MGP_PahariEiJ_G0025843	Xrn2	95	73.297	Mus_pahari
ENSMAMG00000008633	xrn2	97	72.825	MGP_SPRETEiJ_G0025318	Xrn2	94	85.149	Mus_spretus
ENSMAMG00000008633	xrn2	98	70.031	ENSMPUG00000001198	XRN2	89	71.474	Mustela_putorius_furo
ENSMAMG00000008633	xrn2	98	71.144	ENSMLUG00000001536	XRN2	95	72.658	Myotis_lucifugus
ENSMAMG00000008633	xrn2	98	71.654	ENSNGAG00000018138	Xrn2	95	73.123	Nannospalax_galili
ENSMAMG00000008633	xrn2	90	90.092	ENSNBRG00000008062	xrn2	98	90.092	Neolamprologus_brichardi
ENSMAMG00000008633	xrn2	98	70.964	ENSNLEG00000009991	XRN2	95	72.470	Nomascus_leucogenys
ENSMAMG00000008633	xrn2	52	84.444	ENSMEUG00000008622	-	53	84.444	Notamacropus_eugenii
ENSMAMG00000008633	xrn2	73	72.632	ENSOPRG00000001397	-	63	72.632	Ochotona_princeps
ENSMAMG00000008633	xrn2	98	71.384	ENSODEG00000010745	-	95	72.905	Octodon_degus
ENSMAMG00000008633	xrn2	97	64.781	ENSODEG00000000860	-	96	66.332	Octodon_degus
ENSMAMG00000008633	xrn2	96	88.769	ENSONIG00000018720	xrn2	95	87.802	Oreochromis_niloticus
ENSMAMG00000008633	xrn2	96	72.068	ENSOANG00000015673	XRN2	96	72.717	Ornithorhynchus_anatinus
ENSMAMG00000008633	xrn2	98	71.609	ENSOCUG00000013468	XRN2	95	72.905	Oryctolagus_cuniculus
ENSMAMG00000008633	xrn2	99	85.282	ENSORLG00000017213	xrn2	99	87.628	Oryzias_latipes
ENSMAMG00000008633	xrn2	99	85.073	ENSORLG00020001824	xrn2	96	86.304	Oryzias_latipes_hni
ENSMAMG00000008633	xrn2	99	84.864	ENSORLG00015019747	xrn2	96	86.087	Oryzias_latipes_hsok
ENSMAMG00000008633	xrn2	97	85.624	ENSOMEG00000019820	xrn2	94	85.993	Oryzias_melastigma
ENSMAMG00000008633	xrn2	98	71.534	ENSOGAG00000001068	XRN2	95	73.064	Otolemur_garnettii
ENSMAMG00000008633	xrn2	95	70.086	ENSOARG00000004443	XRN2	95	71.605	Ovis_aries
ENSMAMG00000008633	xrn2	98	70.964	ENSPPAG00000033549	XRN2	95	72.470	Pan_paniscus
ENSMAMG00000008633	xrn2	98	71.069	ENSPPRG00000008732	XRN2	95	72.579	Panthera_pardus
ENSMAMG00000008633	xrn2	95	70.582	ENSPTIG00000015683	XRN2	93	72.116	Panthera_tigris_altaica
ENSMAMG00000008633	xrn2	98	70.964	ENSPTRG00000013308	XRN2	95	72.470	Pan_troglodytes
ENSMAMG00000008633	xrn2	98	70.964	ENSPANG00000018088	XRN2	95	72.470	Papio_anubis
ENSMAMG00000008633	xrn2	93	82.301	ENSPKIG00000016889	xrn2	94	82.096	Paramormyrops_kingsleyae
ENSMAMG00000008633	xrn2	80	77.043	ENSPSIG00000014666	XRN2	100	77.043	Pelodiscus_sinensis
ENSMAMG00000008633	xrn2	98	71.504	ENSPEMG00000000111	Xrn2	95	73.035	Peromyscus_maniculatus_bairdii
ENSMAMG00000008633	xrn2	99	85.057	ENSPFOG00000004182	xrn2	95	85.978	Poecilia_formosa
ENSMAMG00000008633	xrn2	90	87.917	ENSPLAG00000007351	xrn2	97	87.917	Poecilia_latipinna
ENSMAMG00000008633	xrn2	93	84.496	ENSPMEG00000011798	xrn2	95	85.450	Poecilia_mexicana
ENSMAMG00000008633	xrn2	90	87.872	ENSPREG00000012452	xrn2	99	87.415	Poecilia_reticulata
ENSMAMG00000008633	xrn2	98	70.650	ENSPPYG00000010755	XRN2	95	72.144	Pongo_abelii
ENSMAMG00000008633	xrn2	98	67.364	ENSPCAG00000011191	XRN2	95	68.730	Procavia_capensis
ENSMAMG00000008633	xrn2	98	65.195	ENSPCOG00000016468	XRN2	95	66.268	Propithecus_coquereli
ENSMAMG00000008633	xrn2	91	66.365	ENSPVAG00000004596	XRN2	88	66.365	Pteropus_vampyrus
ENSMAMG00000008633	xrn2	90	88.249	ENSPNYG00000001765	xrn2	98	88.249	Pundamilia_nyererei
ENSMAMG00000008633	xrn2	98	79.772	ENSPNAG00000010956	xrn2	95	81.270	Pygocentrus_nattereri
ENSMAMG00000008633	xrn2	97	72.999	ENSRNOG00000011785	Xrn2	95	73.799	Rattus_norvegicus
ENSMAMG00000008633	xrn2	86	76.053	ENSRBIG00000036193	XRN2	100	76.671	Rhinopithecus_bieti
ENSMAMG00000008633	xrn2	98	71.188	ENSRROG00000044400	XRN2	86	72.707	Rhinopithecus_roxellana
ENSMAMG00000008633	xrn2	71	50.545	YOR048C	RAT1	63	53.140	Saccharomyces_cerevisiae
ENSMAMG00000008633	xrn2	98	71.069	ENSSBOG00000021014	XRN2	95	72.579	Saimiri_boliviensis_boliviensis
ENSMAMG00000008633	xrn2	95	82.043	ENSSFOG00015001091	xrn2	96	82.124	Scleropages_formosus
ENSMAMG00000008633	xrn2	99	86.957	ENSSMAG00000007834	xrn2	98	87.371	Scophthalmus_maximus
ENSMAMG00000008633	xrn2	95	88.841	ENSSDUG00000012802	xrn2	99	91.373	Seriola_dumerili
ENSMAMG00000008633	xrn2	92	94.050	ENSSLDG00000021273	xrn2	99	94.009	Seriola_lalandi_dorsalis
ENSMAMG00000008633	xrn2	75	92.000	ENSSARG00000005859	-	62	92.000	Sorex_araneus
ENSMAMG00000008633	xrn2	97	69.862	ENSSPUG00000005485	XRN2	93	70.724	Sphenodon_punctatus
ENSMAMG00000008633	xrn2	96	90.278	ENSSPAG00000016027	xrn2	98	88.947	Stegastes_partitus
ENSMAMG00000008633	xrn2	98	69.926	ENSSSCG00000007109	XRN2	95	71.397	Sus_scrofa
ENSMAMG00000008633	xrn2	97	70.626	ENSTGUG00000007535	XRN2	90	74.913	Taeniopygia_guttata
ENSMAMG00000008633	xrn2	97	85.174	ENSTRUG00000015489	xrn2	93	86.413	Takifugu_rubripes
ENSMAMG00000008633	xrn2	91	87.384	ENSTNIG00000010712	xrn2	91	87.384	Tetraodon_nigroviridis
ENSMAMG00000008633	xrn2	95	72.108	ENSTBEG00000004119	XRN2	95	72.519	Tupaia_belangeri
ENSMAMG00000008633	xrn2	91	78.456	ENSTTRG00000009087	XRN2	89	78.456	Tursiops_truncatus
ENSMAMG00000008633	xrn2	98	71.279	ENSUAMG00000024634	XRN2	98	71.462	Ursus_americanus
ENSMAMG00000008633	xrn2	95	70.797	ENSUMAG00000004012	XRN2	90	72.340	Ursus_maritimus
ENSMAMG00000008633	xrn2	80	83.819	ENSVPAG00000010694	XRN2	80	83.819	Vicugna_pacos
ENSMAMG00000008633	xrn2	98	71.279	ENSVVUG00000012178	XRN2	95	72.797	Vulpes_vulpes
ENSMAMG00000008633	xrn2	96	73.946	ENSXETG00000023501	xrn2	93	76.397	Xenopus_tropicalis
ENSMAMG00000008633	xrn2	99	84.953	ENSXMAG00000000242	xrn2	92	89.781	Xiphophorus_maculatus