EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000008700 (Gene tree)
Gene ID: 113132237
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 6724 bases
Position: chrOOHQ01000028.1:2343042-2349765
Accession: 113132237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000012841	RNA_pol_A_bac	PF01000.26	4.2e-31	1	1
ENSMAMP00000012862	RNA_pol_A_bac	PF01000.26	1.2e-27	1	1
ENSMAMP00000012862	RNA_pol_L	PF01193.24	1.6e-23	1	1
ENSMAMP00000012841	RNA_pol_L	PF01193.24	2.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000013192	-	3922	-	ENSMAMP00000012841	351 (aa)	XP_026165998	UPI000E45528A
ENSMAMT00000013213	-	894	-	ENSMAMP00000012862	297 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000008700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000008700's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000008700	polr1c	100	71.795	ENSG00000171453	POLR1C	100	75.000	Homo_sapiens
ENSMAMG00000008700	polr1c	100	89.174	ENSAPOG00000024356	polr1c	100	89.174	Acanthochromis_polyacanthus
ENSMAMG00000008700	polr1c	98	72.754	ENSAMEG00000012205	POLR1C	98	72.754	Ailuropoda_melanoleuca
ENSMAMG00000008700	polr1c	94	79.154	ENSACIG00000016268	polr1c	91	79.154	Amphilophus_citrinellus
ENSMAMG00000008700	polr1c	100	88.889	ENSAOCG00000011687	polr1c	97	88.889	Amphiprion_ocellaris
ENSMAMG00000008700	polr1c	100	89.744	ENSAPEG00000002433	polr1c	100	89.744	Amphiprion_percula
ENSMAMG00000008700	polr1c	99	91.977	ENSATEG00000005985	polr1c	99	91.977	Anabas_testudineus
ENSMAMG00000008700	polr1c	87	71.382	ENSAPLG00000002908	POLR1C	100	71.382	Anas_platyrhynchos
ENSMAMG00000008700	polr1c	89	72.204	ENSACAG00000009764	POLR1C	88	72.204	Anolis_carolinensis
ENSMAMG00000008700	polr1c	100	71.795	ENSANAG00000025805	POLR1C	100	71.717	Aotus_nancymaae
ENSMAMG00000008700	polr1c	59	30.337	ENSACLG00000004854	polr2c	78	30.769	Astatotilapia_calliptera
ENSMAMG00000008700	polr1c	100	90.909	ENSACLG00000006573	polr1c	100	90.909	Astatotilapia_calliptera
ENSMAMG00000008700	polr1c	100	83.838	ENSAMXG00000012062	polr1c	100	83.838	Astyanax_mexicanus
ENSMAMG00000008700	polr1c	99	71.920	ENSBTAG00000018969	POLR1C	99	71.920	Bos_taurus
ENSMAMG00000008700	polr1c	99	44.875	WBGene00019275	rpac-40	98	44.875	Caenorhabditis_elegans
ENSMAMG00000008700	polr1c	79	30.224	WBGene00007971	rpb-3	92	30.224	Caenorhabditis_elegans
ENSMAMG00000008700	polr1c	100	71.380	ENSCJAG00000005594	POLR1C	100	71.380	Callithrix_jacchus
ENSMAMG00000008700	polr1c	99	72.779	ENSCAFG00000001872	POLR1C	99	72.779	Canis_familiaris
ENSMAMG00000008700	polr1c	99	72.779	ENSCAFG00020012018	POLR1C	99	72.779	Canis_lupus_dingo
ENSMAMG00000008700	polr1c	60	30.189	ENSCAFG00020007660	POLR2C	60	30.189	Canis_lupus_dingo
ENSMAMG00000008700	polr1c	99	71.920	ENSCHIG00000004352	POLR1C	99	71.920	Capra_hircus
ENSMAMG00000008700	polr1c	99	71.633	ENSTSYG00000011921	POLR1C	99	71.633	Carlito_syrichta
ENSMAMG00000008700	polr1c	86	72.607	ENSCAPG00000015364	POLR1C	88	72.607	Cavia_aperea
ENSMAMG00000008700	polr1c	100	72.365	ENSCPOG00000038098	POLR1C	100	72.365	Cavia_porcellus
ENSMAMG00000008700	polr1c	99	71.347	ENSCCAG00000020169	POLR1C	99	71.347	Cebus_capucinus
ENSMAMG00000008700	polr1c	100	71.795	ENSCATG00000044045	POLR1C	100	71.795	Cercocebus_atys
ENSMAMG00000008700	polr1c	60	30.189	ENSCLAG00000013676	POLR2C	52	30.189	Chinchilla_lanigera
ENSMAMG00000008700	polr1c	100	72.650	ENSCLAG00000009266	POLR1C	100	72.650	Chinchilla_lanigera
ENSMAMG00000008700	polr1c	100	70.940	ENSCSAG00000011913	POLR1C	100	70.940	Chlorocebus_sabaeus
ENSMAMG00000008700	polr1c	60	68.396	ENSCHOG00000006601	POLR1C	100	68.396	Choloepus_hoffmanni
ENSMAMG00000008700	polr1c	99	75.072	ENSCPBG00000025203	POLR1C	99	75.072	Chrysemys_picta_bellii
ENSMAMG00000008700	polr1c	99	53.602	ENSCING00000003563	-	99	53.602	Ciona_intestinalis
ENSMAMG00000008700	polr1c	100	72.080	ENSCANG00000043167	POLR1C	100	72.080	Colobus_angolensis_palliatus
ENSMAMG00000008700	polr1c	99	72.206	ENSCGRG00001017533	Polr1c	99	72.206	Cricetulus_griseus_chok1gshd
ENSMAMG00000008700	polr1c	86	72.937	ENSCGRG00000013225	Polr1c	100	72.937	Cricetulus_griseus_crigri
ENSMAMG00000008700	polr1c	100	86.895	ENSCSEG00000018097	polr1c	100	86.895	Cynoglossus_semilaevis
ENSMAMG00000008700	polr1c	56	30.256	ENSCVAG00000017931	polr2c	74	30.256	Cyprinodon_variegatus
ENSMAMG00000008700	polr1c	60	91.038	ENSCVAG00000005684	polr1c	89	89.238	Cyprinodon_variegatus
ENSMAMG00000008700	polr1c	100	83.191	ENSDARG00000039400	polr1c	96	83.191	Danio_rerio
ENSMAMG00000008700	polr1c	100	71.510	ENSDNOG00000042693	POLR1C	100	71.510	Dasypus_novemcinctus
ENSMAMG00000008700	polr1c	99	71.920	ENSDORG00000000429	Polr1c	99	71.920	Dipodomys_ordii
ENSMAMG00000008700	polr1c	90	53.628	FBgn0031657	CG3756	93	53.628	Drosophila_melanogaster
ENSMAMG00000008700	polr1c	99	68.571	ENSETEG00000010807	POLR1C	99	68.571	Echinops_telfairi
ENSMAMG00000008700	polr1c	99	66.476	ENSEBUG00000013725	polr1c	99	66.476	Eptatretus_burgeri
ENSMAMG00000008700	polr1c	99	71.920	ENSEASG00005003338	POLR1C	99	71.920	Equus_asinus_asinus
ENSMAMG00000008700	polr1c	99	71.920	ENSECAG00000023516	POLR1C	99	71.864	Equus_caballus
ENSMAMG00000008700	polr1c	99	72.779	ENSEEUG00000005471	POLR1C	99	72.779	Erinaceus_europaeus
ENSMAMG00000008700	polr1c	100	83.502	ENSELUG00000013027	polr1c	100	83.502	Esox_lucius
ENSMAMG00000008700	polr1c	99	72.542	ENSFCAG00000009735	POLR1C	99	72.542	Felis_catus
ENSMAMG00000008700	polr1c	93	71.865	ENSFALG00000012111	POLR1C	100	71.865	Ficedula_albicollis
ENSMAMG00000008700	polr1c	99	71.633	ENSFDAG00000008428	POLR1C	99	71.633	Fukomys_damarensis
ENSMAMG00000008700	polr1c	57	86.047	ENSFHEG00000013867	-	84	87.791	Fundulus_heteroclitus
ENSMAMG00000008700	polr1c	100	87.879	ENSFHEG00000000262	polr1c	100	87.879	Fundulus_heteroclitus
ENSMAMG00000008700	polr1c	93	82.317	ENSGMOG00000013878	polr1c	100	82.317	Gadus_morhua
ENSMAMG00000008700	polr1c	99	72.493	ENSGALG00000010349	POLR1C	99	72.493	Gallus_gallus
ENSMAMG00000008700	polr1c	100	89.174	ENSGAFG00000010153	polr1c	100	89.174	Gambusia_affinis
ENSMAMG00000008700	polr1c	100	88.604	ENSGACG00000002453	polr1c	100	88.604	Gasterosteus_aculeatus
ENSMAMG00000008700	polr1c	98	74.783	ENSGAGG00000010640	POLR1C	99	74.783	Gopherus_agassizii
ENSMAMG00000008700	polr1c	100	71.795	ENSGGOG00000010903	POLR1C	100	71.795	Gorilla_gorilla
ENSMAMG00000008700	polr1c	59	30.337	ENSHBUG00000023040	polr2c	78	30.769	Haplochromis_burtoni
ENSMAMG00000008700	polr1c	100	81.197	ENSHBUG00000017816	polr1c	100	81.197	Haplochromis_burtoni
ENSMAMG00000008700	polr1c	99	71.633	ENSHGLG00000019441	POLR1C	99	71.633	Heterocephalus_glaber_female
ENSMAMG00000008700	polr1c	99	71.633	ENSHGLG00100005970	POLR1C	99	71.633	Heterocephalus_glaber_male
ENSMAMG00000008700	polr1c	98	84.058	ENSHCOG00000002179	polr1c	99	84.058	Hippocampus_comes
ENSMAMG00000008700	polr1c	99	83.095	ENSIPUG00000024464	polr1c	99	83.095	Ictalurus_punctatus
ENSMAMG00000008700	polr1c	99	71.920	ENSSTOG00000010631	POLR1C	99	71.920	Ictidomys_tridecemlineatus
ENSMAMG00000008700	polr1c	99	72.493	ENSJJAG00000023110	Polr1c	99	72.493	Jaculus_jaculus
ENSMAMG00000008700	polr1c	100	89.174	ENSKMAG00000014305	polr1c	100	88.552	Kryptolebias_marmoratus
ENSMAMG00000008700	polr1c	100	90.028	ENSLBEG00000014925	polr1c	100	90.028	Labrus_bergylta
ENSMAMG00000008700	polr1c	95	59.226	ENSLACG00000012567	POLR1C	98	59.226	Latimeria_chalumnae
ENSMAMG00000008700	polr1c	100	79.487	ENSLOCG00000016710	polr1c	96	79.487	Lepisosteus_oculatus
ENSMAMG00000008700	polr1c	87	72.459	ENSLAFG00000026248	POLR1C	100	72.459	Loxodonta_africana
ENSMAMG00000008700	polr1c	60	30.189	ENSLAFG00000027230	POLR2C	74	30.189	Loxodonta_africana
ENSMAMG00000008700	polr1c	100	71.510	ENSMFAG00000046295	POLR1C	100	71.510	Macaca_fascicularis
ENSMAMG00000008700	polr1c	100	71.510	ENSMMUG00000015192	POLR1C	100	71.510	Macaca_mulatta
ENSMAMG00000008700	polr1c	100	71.510	ENSMNEG00000028073	POLR1C	100	71.510	Macaca_nemestrina
ENSMAMG00000008700	polr1c	100	71.510	ENSMLEG00000034818	POLR1C	100	71.510	Mandrillus_leucophaeus
ENSMAMG00000008700	polr1c	100	90.598	ENSMZEG00005018545	polr1c	100	90.598	Maylandia_zebra
ENSMAMG00000008700	polr1c	84	68.475	ENSMGAG00000011020	POLR1C	100	68.475	Meleagris_gallopavo
ENSMAMG00000008700	polr1c	99	71.633	ENSMAUG00000014329	Polr1c	99	71.633	Mesocricetus_auratus
ENSMAMG00000008700	polr1c	99	70.847	ENSMICG00000005027	POLR1C	99	70.847	Microcebus_murinus
ENSMAMG00000008700	polr1c	99	72.493	ENSMOCG00000017549	Polr1c	99	72.493	Microtus_ochrogaster
ENSMAMG00000008700	polr1c	100	86.532	ENSMMOG00000005380	polr1c	100	86.532	Mola_mola
ENSMAMG00000008700	polr1c	84	73.898	ENSMODG00000018964	POLR1C	100	73.898	Monodelphis_domestica
ENSMAMG00000008700	polr1c	100	91.919	ENSMALG00000011711	polr1c	100	91.919	Monopterus_albus
ENSMAMG00000008700	polr1c	99	63.037	MGP_CAROLIEiJ_G0021662	Polr1c	100	70.455	Mus_caroli
ENSMAMG00000008700	polr1c	99	71.920	ENSMUSG00000067148	Polr1c	98	75.248	Mus_musculus
ENSMAMG00000008700	polr1c	99	72.493	MGP_PahariEiJ_G0020654	Polr1c	98	76.238	Mus_pahari
ENSMAMG00000008700	polr1c	99	71.920	MGP_SPRETEiJ_G0022574	Polr1c	98	75.248	Mus_spretus
ENSMAMG00000008700	polr1c	99	71.920	ENSMPUG00000012916	POLR1C	91	71.920	Mustela_putorius_furo
ENSMAMG00000008700	polr1c	99	72.493	ENSMLUG00000017751	POLR1C	99	72.493	Myotis_lucifugus
ENSMAMG00000008700	polr1c	99	71.347	ENSNGAG00000023487	Polr1c	100	71.864	Nannospalax_galili
ENSMAMG00000008700	polr1c	100	90.598	ENSNBRG00000018742	polr1c	100	90.598	Neolamprologus_brichardi
ENSMAMG00000008700	polr1c	50	30.114	ENSNLEG00000003034	POLR2C	63	30.114	Nomascus_leucogenys
ENSMAMG00000008700	polr1c	100	71.795	ENSNLEG00000004035	POLR1C	100	71.795	Nomascus_leucogenys
ENSMAMG00000008700	polr1c	100	62.248	ENSMEUG00000006778	POLR1C	100	62.248	Notamacropus_eugenii
ENSMAMG00000008700	polr1c	80	68.354	ENSOPRG00000000145	POLR1C	99	71.218	Ochotona_princeps
ENSMAMG00000008700	polr1c	62	68.950	ENSODEG00000017109	-	100	68.950	Octodon_degus
ENSMAMG00000008700	polr1c	100	72.650	ENSODEG00000015831	-	100	72.650	Octodon_degus
ENSMAMG00000008700	polr1c	100	91.453	ENSONIG00000013133	polr1c	98	91.453	Oreochromis_niloticus
ENSMAMG00000008700	polr1c	99	69.341	ENSOANG00000003043	POLR1C	99	69.341	Ornithorhynchus_anatinus
ENSMAMG00000008700	polr1c	99	71.060	ENSOCUG00000005504	POLR1C	99	71.060	Oryctolagus_cuniculus
ENSMAMG00000008700	polr1c	100	83.476	ENSORLG00000019743	polr1c	100	83.476	Oryzias_latipes
ENSMAMG00000008700	polr1c	100	84.330	ENSORLG00020006489	POLR1C	100	84.330	Oryzias_latipes_hni
ENSMAMG00000008700	polr1c	76	66.788	ENSORLG00020005555	polr1c	81	66.788	Oryzias_latipes_hni
ENSMAMG00000008700	polr1c	100	83.476	ENSORLG00015013322	polr1c	100	83.476	Oryzias_latipes_hsok
ENSMAMG00000008700	polr1c	100	84.330	ENSOMEG00000016527	polr1c	100	84.330	Oryzias_melastigma
ENSMAMG00000008700	polr1c	99	71.920	ENSOGAG00000016318	POLR1C	99	71.920	Otolemur_garnettii
ENSMAMG00000008700	polr1c	99	71.633	ENSOARG00000007503	POLR1C	99	71.633	Ovis_aries
ENSMAMG00000008700	polr1c	100	71.795	ENSPPAG00000043678	POLR1C	100	71.795	Pan_paniscus
ENSMAMG00000008700	polr1c	99	72.542	ENSPPRG00000009760	POLR1C	99	72.542	Panthera_pardus
ENSMAMG00000008700	polr1c	99	72.542	ENSPTIG00000014813	POLR1C	99	72.542	Panthera_tigris_altaica
ENSMAMG00000008700	polr1c	100	71.795	ENSPTRG00000018202	POLR1C	100	71.795	Pan_troglodytes
ENSMAMG00000008700	polr1c	100	71.795	ENSPANG00000009025	POLR1C	100	71.717	Papio_anubis
ENSMAMG00000008700	polr1c	100	81.145	ENSPKIG00000009858	polr1c	100	81.145	Paramormyrops_kingsleyae
ENSMAMG00000008700	polr1c	99	74.212	ENSPSIG00000012580	POLR1C	94	74.212	Pelodiscus_sinensis
ENSMAMG00000008700	polr1c	100	87.205	ENSPMGG00000012121	polr1c	100	87.205	Periophthalmus_magnuspinnatus
ENSMAMG00000008700	polr1c	57	30.151	ENSPMGG00000021249	polr2c	77	30.151	Periophthalmus_magnuspinnatus
ENSMAMG00000008700	polr1c	99	72.206	ENSPEMG00000006970	Polr1c	99	72.206	Peromyscus_maniculatus_bairdii
ENSMAMG00000008700	polr1c	59	34.066	ENSPMAG00000004827	polr2c	87	32.558	Petromyzon_marinus
ENSMAMG00000008700	polr1c	99	70.455	ENSPMAG00000005560	polr1c	99	70.455	Petromyzon_marinus
ENSMAMG00000008700	polr1c	100	73.737	ENSPCIG00000028137	POLR1C	100	73.737	Phascolarctos_cinereus
ENSMAMG00000008700	polr1c	100	89.459	ENSPFOG00000014357	polr1c	98	89.459	Poecilia_formosa
ENSMAMG00000008700	polr1c	100	89.459	ENSPFOG00000014342	POLR1C	100	89.459	Poecilia_formosa
ENSMAMG00000008700	polr1c	60	90.094	ENSPLAG00000004111	polr1c	93	89.189	Poecilia_latipinna
ENSMAMG00000008700	polr1c	100	89.459	ENSPMEG00000008420	polr1c	100	89.459	Poecilia_mexicana
ENSMAMG00000008700	polr1c	100	89.459	ENSPMEG00000011877	-	100	89.459	Poecilia_mexicana
ENSMAMG00000008700	polr1c	100	88.604	ENSPREG00000007985	polr1c	100	88.604	Poecilia_reticulata
ENSMAMG00000008700	polr1c	100	71.795	ENSPPYG00000016645	POLR1C	100	71.795	Pongo_abelii
ENSMAMG00000008700	polr1c	99	71.186	ENSPCOG00000024628	POLR1C	99	71.186	Propithecus_coquereli
ENSMAMG00000008700	polr1c	99	66.476	ENSPVAG00000005689	POLR1C	99	66.476	Pteropus_vampyrus
ENSMAMG00000008700	polr1c	100	90.598	ENSPNYG00000003620	polr1c	100	90.598	Pundamilia_nyererei
ENSMAMG00000008700	polr1c	100	83.761	ENSPNAG00000008443	polr1c	100	83.761	Pygocentrus_nattereri
ENSMAMG00000008700	polr1c	99	71.633	ENSRNOG00000019079	Polr1c	99	71.633	Rattus_norvegicus
ENSMAMG00000008700	polr1c	100	72.080	ENSRBIG00000007155	POLR1C	100	72.080	Rhinopithecus_bieti
ENSMAMG00000008700	polr1c	100	72.080	ENSRROG00000000257	POLR1C	100	72.080	Rhinopithecus_roxellana
ENSMAMG00000008700	polr1c	55	30.653	YIL021W	RPB3	55	30.653	Saccharomyces_cerevisiae
ENSMAMG00000008700	polr1c	92	48.137	YPR110C	RPC40	95	48.137	Saccharomyces_cerevisiae
ENSMAMG00000008700	polr1c	99	71.347	ENSSBOG00000025735	POLR1C	99	71.613	Saimiri_boliviensis_boliviensis
ENSMAMG00000008700	polr1c	100	66.097	ENSSHAG00000014456	POLR1C	100	66.097	Sarcophilus_harrisii
ENSMAMG00000008700	polr1c	100	82.051	ENSSFOG00015019860	polr1c	100	82.051	Scleropages_formosus
ENSMAMG00000008700	polr1c	100	88.889	ENSSMAG00000018865	polr1c	100	88.889	Scophthalmus_maximus
ENSMAMG00000008700	polr1c	100	92.593	ENSSDUG00000015745	polr1c	100	92.256	Seriola_dumerili
ENSMAMG00000008700	polr1c	100	92.023	ENSSLDG00000018285	polr1c	100	91.582	Seriola_lalandi_dorsalis
ENSMAMG00000008700	polr1c	98	71.594	ENSSPUG00000011822	POLR1C	99	71.594	Sphenodon_punctatus
ENSMAMG00000008700	polr1c	100	89.744	ENSSPAG00000022369	polr1c	100	89.744	Stegastes_partitus
ENSMAMG00000008700	polr1c	99	71.920	ENSSSCG00000028007	POLR1C	98	71.920	Sus_scrofa
ENSMAMG00000008700	polr1c	96	72.321	ENSTGUG00000009159	POLR1C	99	72.321	Taeniopygia_guttata
ENSMAMG00000008700	polr1c	100	85.755	ENSTRUG00000006264	polr1c	100	85.755	Takifugu_rubripes
ENSMAMG00000008700	polr1c	51	70.787	ENSTBEG00000002254	POLR1C	100	70.787	Tupaia_belangeri
ENSMAMG00000008700	polr1c	76	70.037	ENSTTRG00000006344	POLR1C	76	70.037	Tursiops_truncatus
ENSMAMG00000008700	polr1c	98	73.043	ENSUAMG00000025602	POLR1C	99	73.043	Ursus_americanus
ENSMAMG00000008700	polr1c	98	73.043	ENSUMAG00000005938	POLR1C	99	73.043	Ursus_maritimus
ENSMAMG00000008700	polr1c	99	72.881	ENSVVUG00000028922	POLR1C	99	72.881	Vulpes_vulpes
ENSMAMG00000008700	polr1c	99	68.857	ENSXETG00000010882	polr1c	99	68.857	Xenopus_tropicalis
ENSMAMG00000008700	polr1c	100	88.034	ENSXCOG00000014185	polr1c	100	88.034	Xiphophorus_couchianus
ENSMAMG00000008700	polr1c	100	88.604	ENSXMAG00000015076	polr1c	100	88.604	Xiphophorus_maculatus