EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000008726 (Gene tree)
Gene ID: 113133372
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 8752 bases
Position: chrOOHQ01000074.1:10716581-10725332
Accession: ZDB-GENE-070702-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000012848	HRDC	PF00570.23	2.3e-15	1	1
ENSMAMP00000012848	BDHCT	PF08072.11	2.6e-17	1	1
ENSMAMP00000012848	DEAD	PF00270.29	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000013199	-	5028	-	ENSMAMP00000012848	1366 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000008726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000008726's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000008726	blm	57	66.918	ENSG00000197299	BLM	56	68.794	Homo_sapiens
ENSMAMG00000008726	blm	99	73.756	ENSAPOG00000017966	blm	99	73.756	Acanthochromis_polyacanthus
ENSMAMG00000008726	blm	99	73.305	ENSACIG00000023762	blm	99	72.952	Amphilophus_citrinellus
ENSMAMG00000008726	blm	99	75.072	ENSAOCG00000003318	blm	99	75.144	Amphiprion_ocellaris
ENSMAMG00000008726	blm	99	73.061	ENSAPEG00000018105	blm	99	73.131	Amphiprion_percula
ENSMAMG00000008726	blm	99	76.153	ENSATEG00000006421	blm	99	76.225	Anabas_testudineus
ENSMAMG00000008726	blm	82	51.048	ENSAPLG00000006878	BLM	72	60.995	Anas_platyrhynchos
ENSMAMG00000008726	blm	76	56.034	ENSACAG00000014275	BLM	55	65.949	Anolis_carolinensis
ENSMAMG00000008726	blm	61	63.158	ENSANAG00000038415	BLM	56	68.561	Aotus_nancymaae
ENSMAMG00000008726	blm	99	73.833	ENSACLG00000020354	blm	99	73.729	Astatotilapia_calliptera
ENSMAMG00000008726	blm	99	57.123	ENSAMXG00000016970	blm	99	57.192	Astyanax_mexicanus
ENSMAMG00000008726	blm	60	63.934	ENSCJAG00000009803	BLM	65	68.794	Callithrix_jacchus
ENSMAMG00000008726	blm	80	52.865	ENSCAFG00000012385	BLM	56	65.565	Canis_familiaris
ENSMAMG00000008726	blm	80	52.962	ENSCAFG00020016111	BLM	88	68.076	Canis_lupus_dingo
ENSMAMG00000008726	blm	57	81.301	ENSCHIG00000010329	BLM	60	81.301	Capra_hircus
ENSMAMG00000008726	blm	61	63.626	ENSTSYG00000012368	BLM	57	68.085	Carlito_syrichta
ENSMAMG00000008726	blm	61	71.579	ENSCAPG00000017976	BLM	69	71.579	Cavia_aperea
ENSMAMG00000008726	blm	60	63.496	ENSCPOG00000001761	BLM	59	62.976	Cavia_porcellus
ENSMAMG00000008726	blm	65	63.466	ENSCCAG00000023069	BLM	70	68.617	Cebus_capucinus
ENSMAMG00000008726	blm	64	66.541	ENSCATG00000040609	BLM	75	78.033	Cercocebus_atys
ENSMAMG00000008726	blm	57	66.877	ENSCLAG00000012111	BLM	56	66.751	Chinchilla_lanigera
ENSMAMG00000008726	blm	64	66.415	ENSCSAG00000017040	BLM	68	63.048	Chlorocebus_sabaeus
ENSMAMG00000008726	blm	51	61.111	ENSCHOG00000006255	BLM	55	54.021	Choloepus_hoffmanni
ENSMAMG00000008726	blm	83	51.626	ENSCPBG00000025000	BLM	96	53.441	Chrysemys_picta_bellii
ENSMAMG00000008726	blm	88	65.053	ENSCGRG00001024897	Blm	60	64.235	Cricetulus_griseus_chok1gshd
ENSMAMG00000008726	blm	95	68.385	ENSCSEG00000013483	blm	99	68.333	Cynoglossus_semilaevis
ENSMAMG00000008726	blm	76	68.776	ENSCVAG00000017583	blm	96	69.802	Cyprinodon_variegatus
ENSMAMG00000008726	blm	99	58.548	ENSDARG00000077089	blm	99	58.787	Danio_rerio
ENSMAMG00000008726	blm	57	66.160	ENSDNOG00000010159	BLM	54	65.906	Dasypus_novemcinctus
ENSMAMG00000008726	blm	60	64.447	ENSDORG00000011033	Blm	80	64.466	Dipodomys_ordii
ENSMAMG00000008726	blm	56	40.727	FBgn0002906	Blm	51	41.026	Drosophila_melanogaster
ENSMAMG00000008726	blm	51	57.866	ENSEASG00005006727	BLM	88	57.270	Equus_asinus_asinus
ENSMAMG00000008726	blm	61	60.187	ENSECAG00000011405	BLM	88	59.538	Equus_caballus
ENSMAMG00000008726	blm	91	49.503	ENSEEUG00000001434	BLM	83	51.648	Erinaceus_europaeus
ENSMAMG00000008726	blm	99	58.668	ENSELUG00000019098	blm	99	58.464	Esox_lucius
ENSMAMG00000008726	blm	67	66.413	ENSFCAG00000006087	BLM	60	74.795	Felis_catus
ENSMAMG00000008726	blm	62	61.175	ENSFALG00000010981	BLM	76	62.574	Ficedula_albicollis
ENSMAMG00000008726	blm	82	67.421	ENSFDAG00000012658	BLM	65	67.421	Fukomys_damarensis
ENSMAMG00000008726	blm	100	70.043	ENSFHEG00000002553	blm	100	70.288	Fundulus_heteroclitus
ENSMAMG00000008726	blm	99	60.679	ENSGMOG00000016431	blm	98	70.541	Gadus_morhua
ENSMAMG00000008726	blm	76	54.017	ENSGALG00000008256	BLM	58	64.020	Gallus_gallus
ENSMAMG00000008726	blm	100	70.461	ENSGAFG00000001117	blm	100	70.842	Gambusia_affinis
ENSMAMG00000008726	blm	99	69.888	ENSGACG00000010863	blm	100	90.720	Gasterosteus_aculeatus
ENSMAMG00000008726	blm	65	56.413	ENSGAGG00000005383	BLM	98	52.584	Gopherus_agassizii
ENSMAMG00000008726	blm	76	55.207	ENSGGOG00000007710	BLM	75	78.033	Gorilla_gorilla
ENSMAMG00000008726	blm	99	75.775	ENSHBUG00000015943	blm	99	75.666	Haplochromis_burtoni
ENSMAMG00000008726	blm	68	66.289	ENSHGLG00000013231	BLM	65	65.743	Heterocephalus_glaber_female
ENSMAMG00000008726	blm	75	70.605	ENSHCOG00000011455	blm	99	70.701	Hippocampus_comes
ENSMAMG00000008726	blm	76	63.767	ENSIPUG00000000529	blm	86	62.188	Ictalurus_punctatus
ENSMAMG00000008726	blm	68	62.950	ENSSTOG00000005000	BLM	70	62.053	Ictidomys_tridecemlineatus
ENSMAMG00000008726	blm	54	70.044	ENSJJAG00000016322	Blm	74	72.018	Jaculus_jaculus
ENSMAMG00000008726	blm	99	73.631	ENSKMAG00000016608	blm	99	73.760	Kryptolebias_marmoratus
ENSMAMG00000008726	blm	60	82.593	ENSLBEG00000018729	blm	97	82.709	Labrus_bergylta
ENSMAMG00000008726	blm	61	65.614	ENSLACG00000006490	BLM	59	65.614	Latimeria_chalumnae
ENSMAMG00000008726	blm	99	53.878	ENSLOCG00000014302	blm	99	54.406	Lepisosteus_oculatus
ENSMAMG00000008726	blm	57	67.298	ENSMFAG00000042982	BLM	75	78.361	Macaca_fascicularis
ENSMAMG00000008726	blm	57	67.172	ENSMMUG00000019526	BLM	75	78.361	Macaca_mulatta
ENSMAMG00000008726	blm	57	67.045	ENSMNEG00000031251	BLM	75	78.033	Macaca_nemestrina
ENSMAMG00000008726	blm	64	62.767	ENSMLEG00000032934	BLM	68	59.584	Mandrillus_leucophaeus
ENSMAMG00000008726	blm	99	72.458	ENSMZEG00005022323	blm	99	72.669	Maylandia_zebra
ENSMAMG00000008726	blm	88	64.630	ENSMAUG00000008953	Blm	59	63.967	Mesocricetus_auratus
ENSMAMG00000008726	blm	65	66.498	ENSMICG00000034442	BLM	60	74.590	Microcebus_murinus
ENSMAMG00000008726	blm	60	65.343	ENSMOCG00000016367	Blm	59	65.306	Microtus_ochrogaster
ENSMAMG00000008726	blm	99	73.665	ENSMMOG00000006959	blm	99	73.665	Mola_mola
ENSMAMG00000008726	blm	72	62.456	ENSMODG00000019449	BLM	58	62.412	Monodelphis_domestica
ENSMAMG00000008726	blm	99	78.326	ENSMALG00000007323	blm	99	79.224	Monopterus_albus
ENSMAMG00000008726	blm	61	63.498	MGP_CAROLIEiJ_G0029907	Blm	60	62.911	Mus_caroli
ENSMAMG00000008726	blm	61	63.732	ENSMUSG00000030528	Blm	59	63.423	Mus_musculus
ENSMAMG00000008726	blm	99	46.685	MGP_PahariEiJ_G0013129	Blm	60	63.392	Mus_pahari
ENSMAMG00000008726	blm	61	63.967	MGP_SPRETEiJ_G0031009	Blm	59	63.529	Mus_spretus
ENSMAMG00000008726	blm	60	62.736	ENSMLUG00000014697	BLM	60	62.118	Myotis_lucifugus
ENSMAMG00000008726	blm	60	63.915	ENSNGAG00000001275	Blm	59	63.389	Nannospalax_galili
ENSMAMG00000008726	blm	99	72.458	ENSNBRG00000019702	blm	99	72.669	Neolamprologus_brichardi
ENSMAMG00000008726	blm	76	53.056	ENSNLEG00000012087	BLM	82	59.075	Nomascus_leucogenys
ENSMAMG00000008726	blm	80	66.346	ENSOPRG00000011667	BLM	51	66.346	Ochotona_princeps
ENSMAMG00000008726	blm	76	51.643	ENSODEG00000015373	BLM	75	60.963	Octodon_degus
ENSMAMG00000008726	blm	99	70.945	ENSONIG00000015193	blm	99	71.192	Oreochromis_niloticus
ENSMAMG00000008726	blm	56	67.053	ENSOANG00000009316	-	99	66.538	Ornithorhynchus_anatinus
ENSMAMG00000008726	blm	57	65.557	ENSOCUG00000013969	BLM	55	65.557	Oryctolagus_cuniculus
ENSMAMG00000008726	blm	99	72.424	ENSORLG00000008110	blm	99	72.424	Oryzias_latipes
ENSMAMG00000008726	blm	99	72.279	ENSORLG00020004812	blm	99	72.279	Oryzias_latipes_hni
ENSMAMG00000008726	blm	99	72.496	ENSORLG00015018640	blm	99	75.772	Oryzias_latipes_hsok
ENSMAMG00000008726	blm	99	71.719	ENSOMEG00000023545	blm	99	71.780	Oryzias_melastigma
ENSMAMG00000008726	blm	65	65.409	ENSOGAG00000005708	BLM	69	61.538	Otolemur_garnettii
ENSMAMG00000008726	blm	68	63.807	ENSOARG00000012875	BLM	67	63.455	Ovis_aries
ENSMAMG00000008726	blm	65	66.286	ENSPPRG00000002471	BLM	60	74.795	Panthera_pardus
ENSMAMG00000008726	blm	65	65.526	ENSPTIG00000016168	BLM	59	74.134	Panthera_tigris_altaica
ENSMAMG00000008726	blm	76	54.747	ENSPTRG00000007460	BLM	50	75.154	Pan_troglodytes
ENSMAMG00000008726	blm	64	66.667	ENSPANG00000018572	BLM	75	78.361	Papio_anubis
ENSMAMG00000008726	blm	61	74.026	ENSPKIG00000008954	blm	59	73.759	Paramormyrops_kingsleyae
ENSMAMG00000008726	blm	71	70.397	ENSPMGG00000006629	blm	100	70.325	Periophthalmus_magnuspinnatus
ENSMAMG00000008726	blm	69	64.894	ENSPEMG00000017348	Blm	69	64.075	Peromyscus_maniculatus_bairdii
ENSMAMG00000008726	blm	99	70.253	ENSPFOG00000005059	blm	99	70.036	Poecilia_formosa
ENSMAMG00000008726	blm	99	70.137	ENSPLAG00000017344	blm	99	69.920	Poecilia_latipinna
ENSMAMG00000008726	blm	99	70.130	ENSPMEG00000000321	blm	99	69.913	Poecilia_mexicana
ENSMAMG00000008726	blm	99	69.496	ENSPREG00000007715	blm	99	69.308	Poecilia_reticulata
ENSMAMG00000008726	blm	57	65.660	ENSPPYG00000006784	BLM	61	62.356	Pongo_abelii
ENSMAMG00000008726	blm	61	60.581	ENSPCAG00000008960	BLM	60	60.301	Procavia_capensis
ENSMAMG00000008726	blm	80	48.306	ENSPCOG00000000439	BLM	53	58.503	Propithecus_coquereli
ENSMAMG00000008726	blm	74	77.705	ENSPVAG00000011642	BLM	59	77.705	Pteropus_vampyrus
ENSMAMG00000008726	blm	99	64.859	ENSPNYG00000010956	blm	99	64.718	Pundamilia_nyererei
ENSMAMG00000008726	blm	99	59.094	ENSPNAG00000011714	blm	99	59.189	Pygocentrus_nattereri
ENSMAMG00000008726	blm	61	64.042	ENSRNOG00000011213	Blm	60	63.820	Rattus_norvegicus
ENSMAMG00000008726	blm	61	63.403	ENSRBIG00000029656	BLM	90	69.146	Rhinopithecus_bieti
ENSMAMG00000008726	blm	65	66.289	ENSRROG00000037871	BLM	90	69.146	Rhinopithecus_roxellana
ENSMAMG00000008726	blm	55	68.829	ENSSBOG00000030957	BLM	60	68.262	Saimiri_boliviensis_boliviensis
ENSMAMG00000008726	blm	88	62.339	ENSSHAG00000007988	BLM	66	62.222	Sarcophilus_harrisii
ENSMAMG00000008726	blm	66	72.813	ENSSFOG00015015462	blm	72	74.024	Scleropages_formosus
ENSMAMG00000008726	blm	99	75.451	ENSSMAG00000001120	blm	99	75.451	Scophthalmus_maximus
ENSMAMG00000008726	blm	99	77.468	ENSSDUG00000010955	blm	99	77.468	Seriola_dumerili
ENSMAMG00000008726	blm	99	77.452	ENSSLDG00000000634	blm	99	77.452	Seriola_lalandi_dorsalis
ENSMAMG00000008726	blm	76	51.258	ENSSARG00000006398	BLM	79	51.026	Sorex_araneus
ENSMAMG00000008726	blm	76	53.195	ENSSPUG00000000013	BLM	72	62.287	Sphenodon_punctatus
ENSMAMG00000008726	blm	99	72.817	ENSSPAG00000013999	blm	100	74.103	Stegastes_partitus
ENSMAMG00000008726	blm	64	66.396	ENSSSCG00000001816	BLM	65	65.804	Sus_scrofa
ENSMAMG00000008726	blm	70	54.545	ENSTGUG00000009959	-	81	56.829	Taeniopygia_guttata
ENSMAMG00000008726	blm	99	69.826	ENSTRUG00000019860	blm	99	69.826	Takifugu_rubripes
ENSMAMG00000008726	blm	99	65.153	ENSTNIG00000019246	blm	99	65.248	Tetraodon_nigroviridis
ENSMAMG00000008726	blm	57	67.132	ENSTTRG00000016386	BLM	67	66.624	Tursiops_truncatus
ENSMAMG00000008726	blm	71	52.830	ENSUMAG00000009105	BLM	94	69.565	Ursus_maritimus
ENSMAMG00000008726	blm	60	60.351	ENSVPAG00000000085	BLM	60	59.364	Vicugna_pacos
ENSMAMG00000008726	blm	84	51.498	ENSVVUG00000006402	BLM	65	64.499	Vulpes_vulpes
ENSMAMG00000008726	blm	99	47.243	ENSXETG00000007847	blm	58	64.353	Xenopus_tropicalis
ENSMAMG00000008726	blm	99	67.139	ENSXCOG00000020227	blm	99	67.021	Xiphophorus_couchianus
ENSMAMG00000008726	blm	99	70.571	ENSXMAG00000002951	blm	99	70.520	Xiphophorus_maculatus