EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMAMG00000008821 (Gene tree)
Gene ID
113145479
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Plus strand
Length
11316 bases
Position
chrOOHQ01000094.1:22581596-22592911
Accession
113145479
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000013161CSDPF00313.222.2e-8015
ENSMAMP00000013161CSDPF00313.222.2e-8025
ENSMAMP00000013161CSDPF00313.222.2e-8035
ENSMAMP00000013161CSDPF00313.222.2e-8045
ENSMAMP00000013161CSDPF00313.222.2e-8055
ENSMAMP00000013062CSDPF00313.223.3e-8015
ENSMAMP00000013062CSDPF00313.223.3e-8025
ENSMAMP00000013062CSDPF00313.223.3e-8035
ENSMAMP00000013062CSDPF00313.223.3e-8045
ENSMAMP00000013062CSDPF00313.223.3e-8055
ENSMAMP00000013105CSDPF00313.223.7e-8015
ENSMAMP00000013105CSDPF00313.223.7e-8025
ENSMAMP00000013105CSDPF00313.223.7e-8035
ENSMAMP00000013105CSDPF00313.223.7e-8045
ENSMAMP00000013105CSDPF00313.223.7e-8055
ENSMAMP00000013132CSDPF00313.223.9e-8015
ENSMAMP00000013132CSDPF00313.223.9e-8025
ENSMAMP00000013132CSDPF00313.223.9e-8035
ENSMAMP00000013132CSDPF00313.223.9e-8045
ENSMAMP00000013132CSDPF00313.223.9e-8055
ENSMAMP00000013085CSDPF00313.225.1e-8015
ENSMAMP00000013085CSDPF00313.225.1e-8025
ENSMAMP00000013085CSDPF00313.225.1e-8035
ENSMAMP00000013085CSDPF00313.225.1e-8045
ENSMAMP00000013085CSDPF00313.225.1e-8055
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000013520-2307-ENSMAMP00000013161768 (aa)--
ENSMAMT00000013490-3428-ENSMAMP00000013132879 (aa)XP_026188027UPI000E45B761
ENSMAMT00000013463-3982-ENSMAMP00000013105858 (aa)--
ENSMAMT00000013417-4012-ENSMAMP00000013062868 (aa)XP_026188032UPI000E4560E2
ENSMAMT00000013443-3994-ENSMAMP00000013085862 (aa)--
Gene Model
Click here to download ENSMAMG00000008821's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000008821's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000008821csde110078.312ENSG00000009307CSDE19986.567Homo_sapiens
ENSMAMG00000008821csde110095.708ENSAPOG00000015538csde110095.708Acanthochromis_polyacanthus
ENSMAMG00000008821csde110077.532ENSAMEG00000017129CSDE19477.532Ailuropoda_melanoleuca
ENSMAMG00000008821csde18794.324ENSACIG00000015175csde110094.324Amphilophus_citrinellus
ENSMAMG00000008821csde110095.737ENSAOCG00000011510csde110095.737Amphiprion_ocellaris
ENSMAMG00000008821csde110095.853ENSAPEG00000007194csde110095.853Amphiprion_percula
ENSMAMG00000008821csde110094.148ENSATEG00000003864csde110094.148Anabas_testudineus
ENSMAMG00000008821csde110080.364ENSAPLG00000008797CSDE110080.364Anas_platyrhynchos
ENSMAMG00000008821csde110077.375ENSACAG00000003120CSDE110078.266Anolis_carolinensis
ENSMAMG00000008821csde110078.182ENSANAG00000024665CSDE19578.182Aotus_nancymaae
ENSMAMG00000008821csde19362.191ENSANAG00000028396-9163.265Aotus_nancymaae
ENSMAMG00000008821csde110093.628ENSACLG00000013296csde110093.628Astatotilapia_calliptera
ENSMAMG00000008821csde110087.030ENSAMXG00000007436csde110087.030Astyanax_mexicanus
ENSMAMG00000008821csde110078.052ENSBTAG00000000678CSDE110078.052Bos_taurus
ENSMAMG00000008821csde110078.182ENSCJAG00000012565CSDE19973.739Callithrix_jacchus
ENSMAMG00000008821csde19878.780ENSCAFG00000009618CSDE19478.780Canis_familiaris
ENSMAMG00000008821csde110078.571ENSCAFG00020000481CSDE110078.571Canis_lupus_dingo
ENSMAMG00000008821csde110078.052ENSCHIG00000017250CSDE110078.052Capra_hircus
ENSMAMG00000008821csde110078.442ENSTSYG00000003747CSDE110078.442Carlito_syrichta
ENSMAMG00000008821csde19569.780ENSCAPG00000015128CSDE110069.780Cavia_aperea
ENSMAMG00000008821csde110072.727ENSCPOG00000040388CSDE110072.727Cavia_porcellus
ENSMAMG00000008821csde19655.902ENSCCAG00000030878-9155.902Cebus_capucinus
ENSMAMG00000008821csde19557.583ENSCCAG00000033677-9957.583Cebus_capucinus
ENSMAMG00000008821csde110078.182ENSCCAG00000036794CSDE110076.098Cebus_capucinus
ENSMAMG00000008821csde110078.312ENSCATG00000036962CSDE19778.312Cercocebus_atys
ENSMAMG00000008821csde110078.442ENSCLAG00000006618CSDE110078.442Chinchilla_lanigera
ENSMAMG00000008821csde110075.281ENSCSAG00000001658CSDE19973.853Chlorocebus_sabaeus
ENSMAMG00000008821csde19683.178ENSCHOG00000000918CSDE18980.793Choloepus_hoffmanni
ENSMAMG00000008821csde110080.364ENSCPBG00000016547CSDE110080.364Chrysemys_picta_bellii
ENSMAMG00000008821csde19842.649ENSCING00000014465-9842.775Ciona_intestinalis
ENSMAMG00000008821csde19741.806ENSCSAVG00000008100-10042.331Ciona_savignyi
ENSMAMG00000008821csde18979.926ENSCANG00000031069-9479.926Colobus_angolensis_palliatus
ENSMAMG00000008821csde110078.312ENSCANG00000035096CSDE19778.312Colobus_angolensis_palliatus
ENSMAMG00000008821csde110077.662ENSCGRG00001016833-10077.662Cricetulus_griseus_chok1gshd
ENSMAMG00000008821csde110063.896ENSCGRG00001014011-10063.896Cricetulus_griseus_chok1gshd
ENSMAMG00000008821csde110073.913ENSCGRG00000005831-10073.913Cricetulus_griseus_crigri
ENSMAMG00000008821csde19674.444ENSCGRG00000002225-10074.444Cricetulus_griseus_crigri
ENSMAMG00000008821csde110092.005ENSCSEG00000002620csde110092.005Cynoglossus_semilaevis
ENSMAMG00000008821csde110092.068ENSCVAG00000001344csde110092.068Cyprinodon_variegatus
ENSMAMG00000008821csde110084.606ENSDARG00000074758csde110089.928Danio_rerio
ENSMAMG00000008821csde110078.729ENSDNOG00000010287-9378.729Dasypus_novemcinctus
ENSMAMG00000008821csde16254.753ENSDNOG00000034464-9960.833Dasypus_novemcinctus
ENSMAMG00000008821csde19977.429ENSDORG00000011609Csde19977.429Dipodomys_ordii
ENSMAMG00000008821csde19648.361FBgn0263352Unr8047.505Drosophila_melanogaster
ENSMAMG00000008821csde19381.301ENSETEG00000002491-8772.911Echinops_telfairi
ENSMAMG00000008821csde19069.449ENSETEG00000006280-10069.449Echinops_telfairi
ENSMAMG00000008821csde17954.785ENSETEG00000007109-9954.785Echinops_telfairi
ENSMAMG00000008821csde19960.807ENSETEG00000013678-9960.807Echinops_telfairi
ENSMAMG00000008821csde19954.803ENSEBUG00000008647csde19953.559Eptatretus_burgeri
ENSMAMG00000008821csde110078.701ENSEASG00005006284CSDE110076.585Equus_asinus_asinus
ENSMAMG00000008821csde110078.701ENSECAG00000020885CSDE19978.462Equus_caballus
ENSMAMG00000008821csde19381.931ENSEEUG00000006286CSDE17476.440Erinaceus_europaeus
ENSMAMG00000008821csde110090.023ENSELUG00000015507csde110090.023Esox_lucius
ENSMAMG00000008821csde110078.571ENSFCAG00000029266CSDE110078.571Felis_catus
ENSMAMG00000008821csde110076.875ENSFALG00000003407CSDE110077.778Ficedula_albicollis
ENSMAMG00000008821csde19977.280ENSFDAG00000007882CSDE19977.280Fukomys_damarensis
ENSMAMG00000008821csde19892.053ENSFHEG00000010799csde19992.053Fundulus_heteroclitus
ENSMAMG00000008821csde19986.967ENSGMOG00000012731csde110088.127Gadus_morhua
ENSMAMG00000008821csde19877.197ENSGALG00000002139CSDE19878.109Gallus_gallus
ENSMAMG00000008821csde19492.366ENSGAFG00000005241csde19592.366Gambusia_affinis
ENSMAMG00000008821csde19990.715ENSGACG00000004544csde110092.034Gasterosteus_aculeatus
ENSMAMG00000008821csde110080.364ENSGAGG00000017685CSDE110078.144Gopherus_agassizii
ENSMAMG00000008821csde110078.312ENSGGOG00000002164CSDE110078.312Gorilla_gorilla
ENSMAMG00000008821csde110093.628ENSHBUG00000020315csde110093.628Haplochromis_burtoni
ENSMAMG00000008821csde19667.333ENSHGLG00000010039-10067.333Heterocephalus_glaber_female
ENSMAMG00000008821csde110064.151ENSHGLG00000019549-10064.181Heterocephalus_glaber_female
ENSMAMG00000008821csde110070.390ENSHGLG00000003829-10070.390Heterocephalus_glaber_female
ENSMAMG00000008821csde19960.325ENSHGLG00000000650-9961.491Heterocephalus_glaber_female
ENSMAMG00000008821csde19668.610ENSHGLG00000008555-9968.610Heterocephalus_glaber_female
ENSMAMG00000008821csde19968.021ENSHGLG00000007471-9868.021Heterocephalus_glaber_female
ENSMAMG00000008821csde110070.909ENSHGLG00000009620-10071.039Heterocephalus_glaber_female
ENSMAMG00000008821csde110078.052ENSHGLG00100019438-10078.052Heterocephalus_glaber_male
ENSMAMG00000008821csde110066.104ENSHGLG00100012072-10066.104Heterocephalus_glaber_male
ENSMAMG00000008821csde110064.156ENSHGLG00100001846-10064.156Heterocephalus_glaber_male
ENSMAMG00000008821csde19966.579ENSHGLG00100007287-9866.579Heterocephalus_glaber_male
ENSMAMG00000008821csde19366.203ENSHGLG00100004195-10066.203Heterocephalus_glaber_male
ENSMAMG00000008821csde19667.111ENSHGLG00100006910-10067.111Heterocephalus_glaber_male
ENSMAMG00000008821csde19661.556ENSHGLG00100004833-10061.556Heterocephalus_glaber_male
ENSMAMG00000008821csde19963.716ENSHGLG00100002245-9964.799Heterocephalus_glaber_male
ENSMAMG00000008821csde110091.417ENSHCOG00000004158csde110091.417Hippocampus_comes
ENSMAMG00000008821csde110085.603ENSIPUG00000000355csde110085.603Ictalurus_punctatus
ENSMAMG00000008821csde19065.298ENSSTOG00000032722-9865.298Ictidomys_tridecemlineatus
ENSMAMG00000008821csde110064.623ENSSTOG00000030994-10064.623Ictidomys_tridecemlineatus
ENSMAMG00000008821csde19977.280ENSJJAG00000019571Csde19977.280Jaculus_jaculus
ENSMAMG00000008821csde110088.155ENSKMAG00000005685csde110089.455Kryptolebias_marmoratus
ENSMAMG00000008821csde110094.476ENSLBEG00000014770csde110094.476Labrus_bergylta
ENSMAMG00000008821csde110074.229ENSLACG00000018452CSDE19873.441Latimeria_chalumnae
ENSMAMG00000008821csde110084.693ENSLOCG00000010413csde110082.293Lepisosteus_oculatus
ENSMAMG00000008821csde110078.052ENSLAFG00000007150CSDE19678.052Loxodonta_africana
ENSMAMG00000008821csde110078.312ENSMFAG00000003674CSDE110078.312Macaca_fascicularis
ENSMAMG00000008821csde110078.312ENSMMUG00000001974CSDE110078.312Macaca_mulatta
ENSMAMG00000008821csde110078.312ENSMNEG00000045247CSDE19778.312Macaca_nemestrina
ENSMAMG00000008821csde110078.052ENSMLEG00000038673CSDE19973.624Mandrillus_leucophaeus
ENSMAMG00000008821csde110093.628ENSMZEG00005021675csde110093.628Maylandia_zebra
ENSMAMG00000008821csde110080.260ENSMGAG00000016381CSDE110080.260Meleagris_gallopavo
ENSMAMG00000008821csde19976.981ENSMAUG00000014031Csde19976.981Mesocricetus_auratus
ENSMAMG00000008821csde110078.312ENSMICG00000002050CSDE19975.278Microcebus_murinus
ENSMAMG00000008821csde110077.662ENSMOCG00000018960Csde110077.662Microtus_ochrogaster
ENSMAMG00000008821csde110095.709ENSMMOG00000015075csde110095.709Mola_mola
ENSMAMG00000008821csde110079.016ENSMODG00000004685CSDE110077.561Monodelphis_domestica
ENSMAMG00000008821csde110095.709ENSMALG00000007132csde110095.709Monopterus_albus
ENSMAMG00000008821csde110077.792MGP_CAROLIEiJ_G0025444Csde110084.106Mus_caroli
ENSMAMG00000008821csde110077.792ENSMUSG00000068823Csde110084.106Mus_musculus
ENSMAMG00000008821csde110077.792MGP_PahariEiJ_G0026888Csde110084.106Mus_pahari
ENSMAMG00000008821csde110077.792MGP_SPRETEiJ_G0026394Csde110084.106Mus_spretus
ENSMAMG00000008821csde19875.669ENSMPUG00000005753CSDE19976.617Mustela_putorius_furo
ENSMAMG00000008821csde110078.052ENSMLUG00000005681CSDE19478.052Myotis_lucifugus
ENSMAMG00000008821csde19652.889ENSNGAG00000012599-10052.889Nannospalax_galili
ENSMAMG00000008821csde19976.831ENSNGAG00000021929Csde19976.831Nannospalax_galili
ENSMAMG00000008821csde110093.628ENSNBRG00000020808csde110093.628Neolamprologus_brichardi
ENSMAMG00000008821csde110078.312ENSNLEG00000004842CSDE19778.312Nomascus_leucogenys
ENSMAMG00000008821csde19385.437ENSMEUG00000002677CSDE19585.437Notamacropus_eugenii
ENSMAMG00000008821csde19483.178ENSOPRG00000005002CSDE18272.332Ochotona_princeps
ENSMAMG00000008821csde19652.097ENSODEG00000005979-9852.097Octodon_degus
ENSMAMG00000008821csde19977.130ENSODEG00000007383-9977.130Octodon_degus
ENSMAMG00000008821csde19593.635ENSONIG00000009309csde110093.635Oreochromis_niloticus
ENSMAMG00000008821csde110079.661ENSOANG00000003346-8279.661Ornithorhynchus_anatinus
ENSMAMG00000008821csde110078.052ENSOCUG00000016438CSDE19973.624Oryctolagus_cuniculus
ENSMAMG00000008821csde110091.536ENSORLG00000000707csde110091.544Oryzias_latipes
ENSMAMG00000008821csde110089.277ENSORLG00020005148csde110091.422Oryzias_latipes_hni
ENSMAMG00000008821csde110091.406ENSORLG00015019415csde110091.422Oryzias_latipes_hsok
ENSMAMG00000008821csde110092.188ENSOMEG00000015656csde110092.188Oryzias_melastigma
ENSMAMG00000008821csde110078.442ENSOGAG00000012127CSDE19478.442Otolemur_garnettii
ENSMAMG00000008821csde110078.052ENSOARG00000020034CSDE19478.052Ovis_aries
ENSMAMG00000008821csde110078.312ENSPPAG00000025861CSDE110078.312Pan_paniscus
ENSMAMG00000008821csde110078.571ENSPPRG00000006747CSDE19875.000Panthera_pardus
ENSMAMG00000008821csde110078.571ENSPTIG00000015468CSDE110076.463Panthera_tigris_altaica
ENSMAMG00000008821csde110078.312ENSPTRG00000033721CSDE110076.220Pan_troglodytes
ENSMAMG00000008821csde110078.312ENSPANG00000018873CSDE110078.312Papio_anubis
ENSMAMG00000008821csde110086.849ENSPKIG00000009459csde110086.849Paramormyrops_kingsleyae
ENSMAMG00000008821csde19677.483ENSPSIG00000003823CSDE19976.829Pelodiscus_sinensis
ENSMAMG00000008821csde110090.507ENSPMGG00000000772csde110090.507Periophthalmus_magnuspinnatus
ENSMAMG00000008821csde19977.049ENSPEMG00000020357-10077.049Peromyscus_maniculatus_bairdii
ENSMAMG00000008821csde110076.904ENSPCIG00000022587CSDE110077.805Phascolarctos_cinereus
ENSMAMG00000008821csde19790.669ENSPFOG00000012664csde110091.757Poecilia_formosa
ENSMAMG00000008821csde19585.714ENSPLAG00000017680csde19385.714Poecilia_latipinna
ENSMAMG00000008821csde19586.022ENSPMEG00000005094csde19586.022Poecilia_mexicana
ENSMAMG00000008821csde110090.498ENSPREG00000011631csde110091.325Poecilia_reticulata
ENSMAMG00000008821csde110075.156ENSPPYG00000000996CSDE110076.098Pongo_abelii
ENSMAMG00000008821csde19684.112ENSPCAG00000014368CSDE19478.076Procavia_capensis
ENSMAMG00000008821csde18870.260ENSPCOG00000008223-9270.260Propithecus_coquereli
ENSMAMG00000008821csde110078.571ENSPCOG00000017893CSDE110078.571Propithecus_coquereli
ENSMAMG00000008821csde110073.247ENSPVAG00000008225CSDE19573.247Pteropus_vampyrus
ENSMAMG00000008821csde110093.628ENSPNYG00000013745csde110093.628Pundamilia_nyererei
ENSMAMG00000008821csde110087.678ENSPNAG00000001958csde110087.678Pygocentrus_nattereri
ENSMAMG00000008821csde110074.657ENSRNOG00000061058Csde110075.610Rattus_norvegicus
ENSMAMG00000008821csde110075.097ENSRBIG00000038088-10075.097Rhinopithecus_bieti
ENSMAMG00000008821csde110073.896ENSRBIG00000038966-9870.388Rhinopithecus_bieti
ENSMAMG00000008821csde110078.312ENSRROG00000043101CSDE19778.312Rhinopithecus_roxellana
ENSMAMG00000008821csde110078.182ENSSBOG00000035592CSDE19578.182Saimiri_boliviensis_boliviensis
ENSMAMG00000008821csde110080.000ENSSHAG00000009831CSDE110080.000Sarcophilus_harrisii
ENSMAMG00000008821csde110095.238ENSSFOG00015007498csde19395.238Scleropages_formosus
ENSMAMG00000008821csde110094.661ENSSMAG00000007203csde110094.661Scophthalmus_maximus
ENSMAMG00000008821csde110096.774ENSSDUG00000015380csde110096.774Seriola_dumerili
ENSMAMG00000008821csde110096.484ENSSLDG00000008819csde110096.484Seriola_lalandi_dorsalis
ENSMAMG00000008821csde110077.922ENSSARG00000000738CSDE19477.922Sorex_araneus
ENSMAMG00000008821csde110080.754ENSSPUG00000008714CSDE110080.754Sphenodon_punctatus
ENSMAMG00000008821csde110096.094ENSSPAG00000000716csde110096.094Stegastes_partitus
ENSMAMG00000008821csde110078.701ENSSSCG00000006752CSDE110078.701Sus_scrofa
ENSMAMG00000008821csde110076.185ENSTGUG00000000972CSDE110077.101Taeniopygia_guttata
ENSMAMG00000008821csde110087.891ENSTRUG00000007996csde110087.891Takifugu_rubripes
ENSMAMG00000008821csde19384.674ENSTNIG00000010878csde110088.571Tetraodon_nigroviridis
ENSMAMG00000008821csde19280.982ENSTBEG00000011880-6576.250Tupaia_belangeri
ENSMAMG00000008821csde110077.792ENSTTRG00000015583CSDE19477.792Tursiops_truncatus
ENSMAMG00000008821csde19282.410ENSUAMG00000021779-9882.410Ursus_americanus
ENSMAMG00000008821csde18774.199ENSUAMG00000024289-9974.199Ursus_americanus
ENSMAMG00000008821csde110072.078ENSUMAG00000009720-9772.078Ursus_maritimus
ENSMAMG00000008821csde19274.171ENSUMAG00000011714-9974.171Ursus_maritimus
ENSMAMG00000008821csde110080.698ENSVPAG00000000749CSDE18377.465Vicugna_pacos
ENSMAMG00000008821csde19374.236ENSVVUG00000009890CSDE19475.354Vulpes_vulpes
ENSMAMG00000008821csde110076.493ENSXETG00000021448csde110077.278Xenopus_tropicalis
ENSMAMG00000008821csde19495.207ENSXCOG00000000035csde19986.193Xiphophorus_couchianus
ENSMAMG00000008821csde110090.267ENSXMAG00000009080csde110092.083Xiphophorus_maculatus

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