EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAMG00000008835 (Gene tree)
Gene ID
113131965
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Plus strand
Length
4080 bases
Position
chrOOHQ01000119.1:9868419-9872498
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000013050CPSF73-100_CPF11718.81.2e-4611
ENSMAMP00000013050Beta-CaspPF10996.88.2e-3411
ENSMAMP00000013050Lactamase_BPF00753.273.8e-0811
ENSMAMP00000013050RMMBLPF07521.125.3e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000013404CPSF3-2011899-ENSMAMP00000013050632 (aa)--
Gene Model
Click here to download ENSMAMG00000008835's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000008835's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAMG00000008835CPSF39985.714ENSMAMG00000003076cpsf39983.096
ENSMAMG00000008835CPSF38134.087ENSMAMG00000004522ints118434.087
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000008835CPSF39985.285ENSG00000119203CPSF39785.285Homo_sapiens
ENSMAMG00000008835CPSF37197.339ENSAPOG00000012241CPSF38597.339Acanthochromis_polyacanthus
ENSMAMG00000008835CPSF39587.145ENSAPOG00000022087cpsf39987.145Acanthochromis_polyacanthus
ENSMAMG00000008835CPSF39985.443ENSAMEG00000008493CPSF39285.443Ailuropoda_melanoleuca
ENSMAMG00000008835CPSF310095.618ENSACIG00000023663CPSF310095.618Amphilophus_citrinellus
ENSMAMG00000008835CPSF39985.827ENSACIG00000009846cpsf39985.827Amphilophus_citrinellus
ENSMAMG00000008835CPSF310094.146ENSAOCG00000010077CPSF310094.146Amphiprion_ocellaris
ENSMAMG00000008835CPSF39979.275ENSAOCG00000022056cpsf39185.238Amphiprion_ocellaris
ENSMAMG00000008835CPSF39986.667ENSAPEG00000019526cpsf39986.667Amphiprion_percula
ENSMAMG00000008835CPSF310094.304ENSAPEG00000021167CPSF310094.304Amphiprion_percula
ENSMAMG00000008835CPSF39987.322ENSATEG00000003959cpsf39987.322Anabas_testudineus
ENSMAMG00000008835CPSF310083.236ENSATEG00000014525CPSF39789.137Anabas_testudineus
ENSMAMG00000008835CPSF39984.968ENSAPLG00000006941CPSF39284.968Anas_platyrhynchos
ENSMAMG00000008835CPSF39983.096ENSACAG00000001759CPSF39983.096Anolis_carolinensis
ENSMAMG00000008835CPSF39979.905ENSANAG00000031254CPSF39379.905Aotus_nancymaae
ENSMAMG00000008835CPSF39986.984ENSACLG00000014484cpsf39986.984Astatotilapia_calliptera
ENSMAMG00000008835CPSF310095.775ENSACLG00000018846CPSF310095.775Astatotilapia_calliptera
ENSMAMG00000008835CPSF310087.224ENSAMXG00000004786cpsf310087.224Astyanax_mexicanus
ENSMAMG00000008835CPSF39985.443ENSBTAG00000019735CPSF39285.443Bos_taurus
ENSMAMG00000008835CPSF38459.083WBGene00013460cpsf-37759.083Caenorhabditis_elegans
ENSMAMG00000008835CPSF39985.127ENSCJAG00000006276CPSF39285.127Callithrix_jacchus
ENSMAMG00000008835CPSF39985.443ENSCAFG00000003375CPSF38885.443Canis_familiaris
ENSMAMG00000008835CPSF38888.693ENSCAFG00020026799CPSF39188.693Canis_lupus_dingo
ENSMAMG00000008835CPSF39985.443ENSCHIG00000013973CPSF39285.443Capra_hircus
ENSMAMG00000008835CPSF39985.285ENSTSYG00000002967CPSF39285.285Carlito_syrichta
ENSMAMG00000008835CPSF39985.443ENSCAPG00000013851CPSF39485.443Cavia_aperea
ENSMAMG00000008835CPSF39985.443ENSCPOG00000011299CPSF39285.443Cavia_porcellus
ENSMAMG00000008835CPSF39985.127ENSCCAG00000036730CPSF39385.127Cebus_capucinus
ENSMAMG00000008835CPSF39983.866ENSCATG00000014770CPSF39091.288Cercocebus_atys
ENSMAMG00000008835CPSF39985.285ENSCLAG00000002727CPSF39285.285Chinchilla_lanigera
ENSMAMG00000008835CPSF39976.741ENSCSAG00000007125CPSF39176.741Chlorocebus_sabaeus
ENSMAMG00000008835CPSF38963.047ENSCHOG00000000180CPSF38563.047Choloepus_hoffmanni
ENSMAMG00000008835CPSF39978.757ENSCPBG00000014074CPSF39184.968Chrysemys_picta_bellii
ENSMAMG00000008835CPSF39867.357ENSCING00000007214-8967.357Ciona_intestinalis
ENSMAMG00000008835CPSF39975.358ENSCANG00000034435CPSF39175.358Colobus_angolensis_palliatus
ENSMAMG00000008835CPSF39985.285ENSCGRG00001013134Cpsf39285.285Cricetulus_griseus_chok1gshd
ENSMAMG00000008835CPSF39985.285ENSCGRG00000018319Cpsf39285.285Cricetulus_griseus_crigri
ENSMAMG00000008835CPSF310090.506ENSCSEG00000002021CPSF310090.506Cynoglossus_semilaevis
ENSMAMG00000008835CPSF310086.994ENSCVAG00000015067CPSF39193.513Cyprinodon_variegatus
ENSMAMG00000008835CPSF35075.159ENSCVAG00000022039-9475.159Cyprinodon_variegatus
ENSMAMG00000008835CPSF310081.503ENSDARG00000027649cpsf39187.658Danio_rerio
ENSMAMG00000008835CPSF39984.360ENSDNOG00000008940CPSF38884.360Dasypus_novemcinctus
ENSMAMG00000008835CPSF39486.167ENSDORG00000014263Cpsf39286.167Dipodomys_ordii
ENSMAMG00000008835CPSF39863.622FBgn0261065Cpsf739063.462Drosophila_melanogaster
ENSMAMG00000008835CPSF39476.667ENSETEG00000003893CPSF39276.667Echinops_telfairi
ENSMAMG00000008835CPSF39973.886ENSEBUG00000009018cpsf39174.347Eptatretus_burgeri
ENSMAMG00000008835CPSF39985.443ENSEASG00005003970CPSF39285.443Equus_asinus_asinus
ENSMAMG00000008835CPSF39985.443ENSECAG00000019911CPSF38890.642Equus_caballus
ENSMAMG00000008835CPSF39865.300ENSEEUG00000015422CPSF39965.300Erinaceus_europaeus
ENSMAMG00000008835CPSF39990.476ENSELUG00000013775cpsf39990.476Esox_lucius
ENSMAMG00000008835CPSF39985.443ENSFCAG00000007852CPSF39785.443Felis_catus
ENSMAMG00000008835CPSF39984.968ENSFALG00000006572CPSF39784.968Ficedula_albicollis
ENSMAMG00000008835CPSF39984.628ENSFDAG00000006317CPSF39184.628Fukomys_damarensis
ENSMAMG00000008835CPSF39978.116ENSFHEG00000014774cpsf39183.968Fundulus_heteroclitus
ENSMAMG00000008835CPSF36378.883ENSFHEG00000012186CPSF310078.883Fundulus_heteroclitus
ENSMAMG00000008835CPSF39980.753ENSGMOG00000003157cpsf39186.846Gadus_morhua
ENSMAMG00000008835CPSF39984.177ENSGALG00000016424CPSF39984.177Gallus_gallus
ENSMAMG00000008835CPSF310086.272ENSGAFG00000008016CPSF39192.880Gambusia_affinis
ENSMAMG00000008835CPSF310085.354ENSGAFG00000019449cpsf310085.354Gambusia_affinis
ENSMAMG00000008835CPSF37382.516ENSGAGG00000025583CPSF39382.516Gopherus_agassizii
ENSMAMG00000008835CPSF39985.285ENSGGOG00000001757CPSF39985.285Gorilla_gorilla
ENSMAMG00000008835CPSF39986.984ENSHBUG00000001188cpsf39986.984Haplochromis_burtoni
ENSMAMG00000008835CPSF36392.786ENSHBUG00000014332CPSF310092.786Haplochromis_burtoni
ENSMAMG00000008835CPSF39984.945ENSHGLG00000000666CPSF39184.945Heterocephalus_glaber_female
ENSMAMG00000008835CPSF39984.945ENSHGLG00100007765CPSF39184.945Heterocephalus_glaber_male
ENSMAMG00000008835CPSF39985.962ENSHCOG00000015957CPSF39092.076Hippocampus_comes
ENSMAMG00000008835CPSF39978.582ENSHCOG00000007251cpsf39184.311Hippocampus_comes
ENSMAMG00000008835CPSF310087.342ENSIPUG00000023488cpsf310087.127Ictalurus_punctatus
ENSMAMG00000008835CPSF39985.285ENSSTOG00000004476CPSF39285.285Ictidomys_tridecemlineatus
ENSMAMG00000008835CPSF39984.810ENSJJAG00000023415Cpsf39284.810Jaculus_jaculus
ENSMAMG00000008835CPSF310087.572ENSKMAG00000007317CPSF39194.146Kryptolebias_marmoratus
ENSMAMG00000008835CPSF39978.551ENSKMAG00000002806cpsf39184.286Kryptolebias_marmoratus
ENSMAMG00000008835CPSF39588.316ENSLBEG00000013492CPSF39794.992Labrus_bergylta
ENSMAMG00000008835CPSF39979.327ENSLBEG00000020569cpsf38679.327Labrus_bergylta
ENSMAMG00000008835CPSF35882.385ENSLBEG00000015018-9982.385Labrus_bergylta
ENSMAMG00000008835CPSF310072.150ENSLACG00000008308CPSF39177.409Latimeria_chalumnae
ENSMAMG00000008835CPSF310080.863ENSLOCG00000016823cpsf39187.087Lepisosteus_oculatus
ENSMAMG00000008835CPSF39985.127ENSLAFG00000009467CPSF39285.127Loxodonta_africana
ENSMAMG00000008835CPSF39985.127ENSMFAG00000001339CPSF39785.127Macaca_fascicularis
ENSMAMG00000008835CPSF39985.127ENSMMUG00000018038CPSF39785.127Macaca_mulatta
ENSMAMG00000008835CPSF39993.000ENSMNEG00000039447CPSF39993.000Macaca_nemestrina
ENSMAMG00000008835CPSF39985.285ENSMLEG00000026825CPSF38295.433Mandrillus_leucophaeus
ENSMAMG00000008835CPSF310095.775ENSMZEG00005006258CPSF310095.775Maylandia_zebra
ENSMAMG00000008835CPSF39986.984ENSMZEG00005014358cpsf39986.984Maylandia_zebra
ENSMAMG00000008835CPSF39984.177ENSMGAG00000013995CPSF39484.177Meleagris_gallopavo
ENSMAMG00000008835CPSF35978.249ENSMAUG00000000166Cpsf39978.249Mesocricetus_auratus
ENSMAMG00000008835CPSF39980.032ENSMICG00000002363CPSF39880.032Microcebus_murinus
ENSMAMG00000008835CPSF39982.278ENSMOCG00000020067Cpsf39182.278Microtus_ochrogaster
ENSMAMG00000008835CPSF39981.891ENSMMOG00000018212CPSF39581.891Mola_mola
ENSMAMG00000008835CPSF37881.206ENSMMOG00000011923CPSF38581.206Mola_mola
ENSMAMG00000008835CPSF39983.725ENSMODG00000014703CPSF39283.725Monodelphis_domestica
ENSMAMG00000008835CPSF39692.370ENSMALG00000011474CPSF39692.370Monopterus_albus
ENSMAMG00000008835CPSF39986.984ENSMALG00000016416cpsf39986.984Monopterus_albus
ENSMAMG00000008835CPSF39984.968MGP_CAROLIEiJ_G0017640Cpsf39284.968Mus_caroli
ENSMAMG00000008835CPSF39984.968ENSMUSG00000054309Cpsf39193.694Mus_musculus
ENSMAMG00000008835CPSF39984.810MGP_PahariEiJ_G0029397Cpsf39284.810Mus_pahari
ENSMAMG00000008835CPSF39984.968MGP_SPRETEiJ_G0018481Cpsf39284.968Mus_spretus
ENSMAMG00000008835CPSF39985.103ENSMPUG00000013213CPSF39285.103Mustela_putorius_furo
ENSMAMG00000008835CPSF39985.308ENSMLUG00000010636CPSF39285.308Myotis_lucifugus
ENSMAMG00000008835CPSF39985.127ENSNGAG00000019836Cpsf39285.127Nannospalax_galili
ENSMAMG00000008835CPSF310095.775ENSNBRG00000010525CPSF310095.775Neolamprologus_brichardi
ENSMAMG00000008835CPSF39986.349ENSNBRG00000004770cpsf39986.349Neolamprologus_brichardi
ENSMAMG00000008835CPSF39985.127ENSNLEG00000013359CPSF39785.127Nomascus_leucogenys
ENSMAMG00000008835CPSF39955.696ENSMEUG00000013117-9255.696Notamacropus_eugenii
ENSMAMG00000008835CPSF39975.911ENSOPRG00000008902CPSF39275.911Ochotona_princeps
ENSMAMG00000008835CPSF39985.285ENSODEG00000003129CPSF39285.285Octodon_degus
ENSMAMG00000008835CPSF39980.000ENSONIG00000018812cpsf39186.032Oreochromis_niloticus
ENSMAMG00000008835CPSF38885.310ENSOANG00000008577CPSF39985.310Ornithorhynchus_anatinus
ENSMAMG00000008835CPSF39985.127ENSOCUG00000003728CPSF39285.127Oryctolagus_cuniculus
ENSMAMG00000008835CPSF39977.971ENSORLG00000018854cpsf39183.810Oryzias_latipes
ENSMAMG00000008835CPSF39984.603ENSORLG00020013331cpsf39984.603Oryzias_latipes_hni
ENSMAMG00000008835CPSF39984.810ENSORLG00015011017cpsf39984.810Oryzias_latipes_hsok
ENSMAMG00000008835CPSF39978.261ENSOMEG00000010647cpsf38784.127Oryzias_melastigma
ENSMAMG00000008835CPSF39974.525ENSOGAG00000001680CPSF39274.525Otolemur_garnettii
ENSMAMG00000008835CPSF39985.443ENSOARG00000015073CPSF39285.443Ovis_aries
ENSMAMG00000008835CPSF39985.285ENSPPAG00000042457CPSF39285.285Pan_paniscus
ENSMAMG00000008835CPSF39985.443ENSPPRG00000016790CPSF39785.443Panthera_pardus
ENSMAMG00000008835CPSF39985.443ENSPTIG00000003920CPSF39985.443Panthera_tigris_altaica
ENSMAMG00000008835CPSF39985.285ENSPTRG00000011638CPSF39285.285Pan_troglodytes
ENSMAMG00000008835CPSF39985.127ENSPANG00000016798CPSF39285.127Papio_anubis
ENSMAMG00000008835CPSF310089.937ENSPKIG00000023646cpsf310089.937Paramormyrops_kingsleyae
ENSMAMG00000008835CPSF39984.810ENSPSIG00000016144CPSF39284.810Pelodiscus_sinensis
ENSMAMG00000008835CPSF36390.819ENSPMGG00000015311CPSF310090.819Periophthalmus_magnuspinnatus
ENSMAMG00000008835CPSF310082.753ENSPMGG00000006141-10082.753Periophthalmus_magnuspinnatus
ENSMAMG00000008835CPSF39985.601ENSPEMG00000017668Cpsf39285.601Peromyscus_maniculatus_bairdii
ENSMAMG00000008835CPSF37687.423ENSPMAG00000004841cpsf38987.423Petromyzon_marinus
ENSMAMG00000008835CPSF39984.968ENSPCIG00000009823CPSF39384.968Phascolarctos_cinereus
ENSMAMG00000008835CPSF310078.003ENSPFOG00000015922cpsf39183.994Poecilia_formosa
ENSMAMG00000008835CPSF310085.694ENSPFOG00000010418-9192.405Poecilia_formosa
ENSMAMG00000008835CPSF36390.909ENSPLAG00000021300-10090.909Poecilia_latipinna
ENSMAMG00000008835CPSF310078.003ENSPLAG00000000882cpsf39183.994Poecilia_latipinna
ENSMAMG00000008835CPSF310078.148ENSPMEG00000018309cpsf39184.152Poecilia_mexicana
ENSMAMG00000008835CPSF310079.592ENSPREG00000004482CPSF39185.623Poecilia_reticulata
ENSMAMG00000008835CPSF310085.782ENSPREG00000014875cpsf310085.782Poecilia_reticulata
ENSMAMG00000008835CPSF39980.696ENSPPYG00000012666CPSF39180.696Pongo_abelii
ENSMAMG00000008835CPSF38464.865ENSPCAG00000015042CPSF38164.865Procavia_capensis
ENSMAMG00000008835CPSF38684.279ENSPCOG00000023016CPSF38884.279Propithecus_coquereli
ENSMAMG00000008835CPSF39985.420ENSPVAG00000005324CPSF39285.420Pteropus_vampyrus
ENSMAMG00000008835CPSF38798.185ENSPNYG00000021047CPSF39298.185Pundamilia_nyererei
ENSMAMG00000008835CPSF39986.984ENSPNYG00000004405cpsf39986.984Pundamilia_nyererei
ENSMAMG00000008835CPSF310088.715ENSPNAG00000023060cpsf310088.715Pygocentrus_nattereri
ENSMAMG00000008835CPSF39984.676ENSRNOG00000052418Cpsf39284.676Rattus_norvegicus
ENSMAMG00000008835CPSF39981.804ENSRBIG00000041615CPSF39781.804Rhinopithecus_bieti
ENSMAMG00000008835CPSF39985.285ENSRROG00000033792CPSF39285.285Rhinopithecus_roxellana
ENSMAMG00000008835CPSF38441.941YLR277CYSH17841.941Saccharomyces_cerevisiae
ENSMAMG00000008835CPSF39981.604ENSSBOG00000027263CPSF39281.604Saimiri_boliviensis_boliviensis
ENSMAMG00000008835CPSF39984.810ENSSHAG00000007024CPSF39284.810Sarcophilus_harrisii
ENSMAMG00000008835CPSF310089.168ENSSFOG00015002108cpsf310089.168Scleropages_formosus
ENSMAMG00000008835CPSF39586.677ENSSMAG00000020534CPSF39493.423Scophthalmus_maximus
ENSMAMG00000008835CPSF310096.546ENSSDUG00000018498CPSF310096.546Seriola_dumerili
ENSMAMG00000008835CPSF39979.710ENSSDUG00000002828cpsf38885.873Seriola_dumerili
ENSMAMG00000008835CPSF310096.069ENSSLDG00000005234CPSF310096.069Seriola_lalandi_dorsalis
ENSMAMG00000008835CPSF39979.855ENSSLDG00000008469cpsf38886.032Seriola_lalandi_dorsalis
ENSMAMG00000008835CPSF38980.665ENSSARG00000005186CPSF38280.665Sorex_araneus
ENSMAMG00000008835CPSF39983.019ENSSPUG00000015525CPSF39283.019Sphenodon_punctatus
ENSMAMG00000008835CPSF39980.000ENSSPAG00000018579cpsf39186.032Stegastes_partitus
ENSMAMG00000008835CPSF310096.057ENSSPAG00000002906CPSF310096.057Stegastes_partitus
ENSMAMG00000008835CPSF39886.783ENSSSCG00000020799CPSF39986.783Sus_scrofa
ENSMAMG00000008835CPSF39984.810ENSTGUG00000013016CPSF39284.810Taeniopygia_guttata
ENSMAMG00000008835CPSF39979.420ENSTRUG00000007030cpsf39779.500Takifugu_rubripes
ENSMAMG00000008835CPSF36380.846ENSTRUG00000013905CPSF310080.846Takifugu_rubripes
ENSMAMG00000008835CPSF38387.821ENSTBEG00000002707CPSF37687.821Tupaia_belangeri
ENSMAMG00000008835CPSF38668.975ENSTTRG00000000861CPSF38068.975Tursiops_truncatus
ENSMAMG00000008835CPSF39586.020ENSUAMG00000007535CPSF38786.020Ursus_americanus
ENSMAMG00000008835CPSF39985.443ENSUMAG00000003676CPSF39785.443Ursus_maritimus
ENSMAMG00000008835CPSF39485.284ENSVPAG00000008041CPSF39485.284Vicugna_pacos
ENSMAMG00000008835CPSF39985.443ENSVVUG00000002194CPSF39285.443Vulpes_vulpes
ENSMAMG00000008835CPSF39983.360ENSXETG00000008263cpsf39183.360Xenopus_tropicalis
ENSMAMG00000008835CPSF39978.488ENSXCOG00000019695cpsf39184.554Xiphophorus_couchianus
ENSMAMG00000008835CPSF35889.840ENSXCOG00000000957-8789.840Xiphophorus_couchianus
ENSMAMG00000008835CPSF39984.019ENSXMAG00000009784cpsf39784.019Xiphophorus_maculatus
ENSMAMG00000008835CPSF310085.983ENSXMAG00000027291CPSF39192.563Xiphophorus_maculatus

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