EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000008875 (Gene tree)
Gene ID: 113133085
Gene Symbol: zgc:162879
Alias: -
Full Name: zgc:162879
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 8643 bases
Position: chrOOHQ01000074.1:10879269-10887911
Accession: ZDB-GENE-070424-92
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000013101	MMR_HSR1	PF01926.23	3.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000013459	-	1902	-	ENSMAMP00000013101	633 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000008875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000008875's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000008875	zgc:162879	73	39.412	ENSMAMG00000011388	cracr2ab	55	39.412
ENSMAMG00000008875	zgc:162879	72	41.566	ENSMAMG00000005360	cracr2b	75	41.566
ENSMAMG00000008875	zgc:162879	62	72.727	ENSMAMG00000001536	rasef	69	72.727
ENSMAMG00000008875	zgc:162879	76	38.500	ENSMAMG00000001270	CRACR2A	72	38.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000008875	zgc:162879	99	79.939	ENSAPOG00000008539	zgc:162879	99	79.939	Acanthochromis_polyacanthus
ENSMAMG00000008875	zgc:162879	100	82.192	ENSACIG00000023717	zgc:162879	100	82.192	Amphilophus_citrinellus
ENSMAMG00000008875	zgc:162879	85	80.541	ENSAOCG00000006210	zgc:162879	87	80.541	Amphiprion_ocellaris
ENSMAMG00000008875	zgc:162879	99	80.851	ENSAPEG00000017489	zgc:162879	99	80.851	Amphiprion_percula
ENSMAMG00000008875	zgc:162879	100	83.735	ENSATEG00000006102	zgc:162879	100	83.735	Anabas_testudineus
ENSMAMG00000008875	zgc:162879	100	79.789	ENSACLG00000021066	zgc:162879	100	79.331	Astatotilapia_calliptera
ENSMAMG00000008875	zgc:162879	100	61.756	ENSAMXG00000007430	zgc:162879	100	61.756	Astyanax_mexicanus
ENSMAMG00000008875	zgc:162879	84	66.913	ENSCSEG00000013699	zgc:162879	91	66.913	Cynoglossus_semilaevis
ENSMAMG00000008875	zgc:162879	99	69.848	ENSCVAG00000014510	zgc:162879	99	69.848	Cyprinodon_variegatus
ENSMAMG00000008875	zgc:162879	100	61.145	ENSDARG00000074163	zgc:162879	100	61.145	Danio_rerio
ENSMAMG00000008875	zgc:162879	99	60.658	ENSELUG00000019483	zgc:162879	97	63.816	Esox_lucius
ENSMAMG00000008875	zgc:162879	76	68.390	ENSFHEG00000022549	zgc:162879	100	68.390	Fundulus_heteroclitus
ENSMAMG00000008875	zgc:162879	100	69.592	ENSGAFG00000001313	zgc:162879	100	69.592	Gambusia_affinis
ENSMAMG00000008875	zgc:162879	100	73.016	ENSGACG00000010798	zgc:162879	99	72.872	Gasterosteus_aculeatus
ENSMAMG00000008875	zgc:162879	100	79.819	ENSHBUG00000016335	zgc:162879	100	79.819	Haplochromis_burtoni
ENSMAMG00000008875	zgc:162879	100	52.262	ENSHCOG00000012026	zgc:162879	99	57.285	Hippocampus_comes
ENSMAMG00000008875	zgc:162879	100	69.231	ENSKMAG00000016246	zgc:162879	100	69.692	Kryptolebias_marmoratus
ENSMAMG00000008875	zgc:162879	99	76.025	ENSLBEG00000006690	zgc:162879	100	76.054	Labrus_bergylta
ENSMAMG00000008875	zgc:162879	95	57.333	ENSLACG00000014082	-	87	56.667	Latimeria_chalumnae
ENSMAMG00000008875	zgc:162879	99	58.247	ENSLOCG00000014347	zgc:162879	98	58.247	Lepisosteus_oculatus
ENSMAMG00000008875	zgc:162879	100	79.638	ENSMZEG00005022256	zgc:162879	100	79.638	Maylandia_zebra
ENSMAMG00000008875	zgc:162879	100	72.451	ENSNBRG00000020110	zgc:162879	100	72.451	Neolamprologus_brichardi
ENSMAMG00000008875	zgc:162879	99	75.857	ENSONIG00000015165	zgc:162879	100	75.857	Oreochromis_niloticus
ENSMAMG00000008875	zgc:162879	99	67.020	ENSORLG00015017960	zgc:162879	99	67.020	Oryzias_latipes_hsok
ENSMAMG00000008875	zgc:162879	100	58.514	ENSPKIG00000020661	zgc:162879	100	58.514	Paramormyrops_kingsleyae
ENSMAMG00000008875	zgc:162879	100	68.986	ENSPFOG00000006354	zgc:162879	99	68.986	Poecilia_formosa
ENSMAMG00000008875	zgc:162879	100	68.986	ENSPLAG00000020643	zgc:162879	99	68.986	Poecilia_latipinna
ENSMAMG00000008875	zgc:162879	100	68.381	ENSPMEG00000014713	zgc:162879	100	68.381	Poecilia_mexicana
ENSMAMG00000008875	zgc:162879	100	73.596	ENSPNYG00000010530	zgc:162879	100	73.596	Pundamilia_nyererei
ENSMAMG00000008875	zgc:162879	100	60.624	ENSPNAG00000012022	zgc:162879	100	60.624	Pygocentrus_nattereri
ENSMAMG00000008875	zgc:162879	84	51.878	ENSSFOG00015023774	zgc:162879	91	51.878	Scleropages_formosus
ENSMAMG00000008875	zgc:162879	100	78.399	ENSSMAG00000001513	zgc:162879	100	78.399	Scophthalmus_maximus
ENSMAMG00000008875	zgc:162879	100	83.735	ENSSDUG00000011478	zgc:162879	100	83.735	Seriola_dumerili
ENSMAMG00000008875	zgc:162879	100	84.187	ENSSLDG00000000877	zgc:162879	100	84.187	Seriola_lalandi_dorsalis
ENSMAMG00000008875	zgc:162879	99	81.210	ENSSPAG00000010598	zgc:162879	99	81.210	Stegastes_partitus
ENSMAMG00000008875	zgc:162879	99	68.892	ENSTNIG00000019239	zgc:162879	99	68.892	Tetraodon_nigroviridis
ENSMAMG00000008875	zgc:162879	99	42.382	ENSXETG00000015491	rasef	98	41.967	Xenopus_tropicalis
ENSMAMG00000008875	zgc:162879	76	72.050	ENSXCOG00000020244	zgc:162879	99	72.050	Xiphophorus_couchianus
ENSMAMG00000008875	zgc:162879	100	69.894	ENSXMAG00000002846	zgc:162879	100	70.348	Xiphophorus_maculatus