EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000008919 (Gene tree)
Gene ID: 113142749
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 16128 bases
Position: chrOOHQ01000107.1:27924493-27940620
Accession: 113142749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000013255	RRM_4	PF10598.9	3.3e-48	1	1
ENSMAMP00000013255	U5_2-snRNA_bdg	PF10597.9	7.9e-74	1	1
ENSMAMP00000013255	PRO8NT	PF08082.11	4.9e-87	1	1
ENSMAMP00000013255	U6-snRNA_bdg	PF10596.9	2e-89	1	1
ENSMAMP00000013255	PROCN	PF08083.11	5.4e-236	1	1
ENSMAMP00000013255	PRP8_domainIV	PF12134.8	4.6e-130	1	1
ENSMAMP00000013255	PROCT	PF08084.11	3e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000013621	-	7749	XM_026327949	ENSMAMP00000013255	2338 (aa)	XP_026183734	UPI000E462A48

Gene Model

Click here to download ENSMAMG00000008919's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000008919's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000008919	prpf8	100	97.776	ENSG00000174231	PRPF8	100	97.776	Homo_sapiens
ENSMAMG00000008919	prpf8	100	99.701	ENSAPOG00000010079	prpf8	100	99.701	Acanthochromis_polyacanthus
ENSMAMG00000008919	prpf8	100	97.776	ENSAMEG00000007940	PRPF8	100	97.776	Ailuropoda_melanoleuca
ENSMAMG00000008919	prpf8	100	97.580	ENSACIG00000018280	prpf8	100	97.580	Amphilophus_citrinellus
ENSMAMG00000008919	prpf8	100	99.701	ENSAOCG00000010725	prpf8	100	99.701	Amphiprion_ocellaris
ENSMAMG00000008919	prpf8	100	99.701	ENSAPEG00000014397	prpf8	100	99.701	Amphiprion_percula
ENSMAMG00000008919	prpf8	100	99.016	ENSATEG00000010062	prpf8	100	99.016	Anabas_testudineus
ENSMAMG00000008919	prpf8	96	98.132	ENSAPLG00000010357	PRPF8	100	98.132	Anas_platyrhynchos
ENSMAMG00000008919	prpf8	83	96.289	ENSACAG00000014784	PRPF8	99	96.289	Anolis_carolinensis
ENSMAMG00000008919	prpf8	100	97.776	ENSANAG00000032629	PRPF8	100	97.776	Aotus_nancymaae
ENSMAMG00000008919	prpf8	100	98.809	ENSACLG00000020858	prpf8	100	98.809	Astatotilapia_calliptera
ENSMAMG00000008919	prpf8	100	99.016	ENSAMXG00000020291	prpf8	100	99.016	Astyanax_mexicanus
ENSMAMG00000008919	prpf8	100	97.776	ENSBTAG00000011488	PRPF8	100	97.776	Bos_taurus
ENSMAMG00000008919	prpf8	99	86.661	WBGene00004187	prp-8	99	87.111	Caenorhabditis_elegans
ENSMAMG00000008919	prpf8	100	97.776	ENSCJAG00000001911	PRPF8	100	97.776	Callithrix_jacchus
ENSMAMG00000008919	prpf8	100	97.776	ENSCAFG00000019221	PRPF8	100	97.776	Canis_familiaris
ENSMAMG00000008919	prpf8	96	98.170	ENSCAFG00020009943	PRPF8	100	98.170	Canis_lupus_dingo
ENSMAMG00000008919	prpf8	100	97.776	ENSCHIG00000017499	PRPF8	100	97.776	Capra_hircus
ENSMAMG00000008919	prpf8	100	97.776	ENSTSYG00000014120	PRPF8	100	97.776	Carlito_syrichta
ENSMAMG00000008919	prpf8	96	95.947	ENSCAPG00000009459	PRPF8	99	95.947	Cavia_aperea
ENSMAMG00000008919	prpf8	100	97.776	ENSCPOG00000010379	PRPF8	100	97.776	Cavia_porcellus
ENSMAMG00000008919	prpf8	100	97.776	ENSCCAG00000031983	-	100	97.776	Cebus_capucinus
ENSMAMG00000008919	prpf8	100	97.776	ENSCATG00000038595	PRPF8	100	97.776	Cercocebus_atys
ENSMAMG00000008919	prpf8	100	97.776	ENSCLAG00000004388	PRPF8	100	97.776	Chinchilla_lanigera
ENSMAMG00000008919	prpf8	100	97.776	ENSCSAG00000013929	PRPF8	100	97.776	Chlorocebus_sabaeus
ENSMAMG00000008919	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSMAMG00000008919	prpf8	100	97.776	ENSCPBG00000020409	PRPF8	100	97.776	Chrysemys_picta_bellii
ENSMAMG00000008919	prpf8	98	93.230	ENSCSAVG00000007825	-	100	91.409	Ciona_savignyi
ENSMAMG00000008919	prpf8	100	97.776	ENSCANG00000043088	PRPF8	100	97.776	Colobus_angolensis_palliatus
ENSMAMG00000008919	prpf8	73	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSMAMG00000008919	prpf8	100	99.188	ENSCSEG00000007905	prpf8	100	99.188	Cynoglossus_semilaevis
ENSMAMG00000008919	prpf8	100	98.804	ENSDARG00000026180	prpf8	100	98.804	Danio_rerio
ENSMAMG00000008919	prpf8	93	97.931	ENSDNOG00000018471	PRPF8	99	97.931	Dasypus_novemcinctus
ENSMAMG00000008919	prpf8	84	96.530	ENSDORG00000006185	Prpf8	96	96.530	Dipodomys_ordii
ENSMAMG00000008919	prpf8	99	91.567	FBgn0033688	Prp8	97	92.052	Drosophila_melanogaster
ENSMAMG00000008919	prpf8	100	92.429	ENSETEG00000017592	PRPF8	100	92.429	Echinops_telfairi
ENSMAMG00000008919	prpf8	99	93.476	ENSEBUG00000006548	prpf8	99	93.476	Eptatretus_burgeri
ENSMAMG00000008919	prpf8	100	97.776	ENSEASG00005009514	PRPF8	100	97.776	Equus_asinus_asinus
ENSMAMG00000008919	prpf8	97	98.198	ENSECAG00000021318	PRPF8	100	98.198	Equus_caballus
ENSMAMG00000008919	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSMAMG00000008919	prpf8	98	97.815	ENSELUG00000007120	prpf8	99	97.815	Esox_lucius
ENSMAMG00000008919	prpf8	100	97.776	ENSFCAG00000006297	PRPF8	100	97.776	Felis_catus
ENSMAMG00000008919	prpf8	100	97.861	ENSFALG00000006628	PRPF8	100	97.861	Ficedula_albicollis
ENSMAMG00000008919	prpf8	100	97.776	ENSFDAG00000004711	PRPF8	100	97.776	Fukomys_damarensis
ENSMAMG00000008919	prpf8	100	98.975	ENSFHEG00000021084	prpf8	100	98.975	Fundulus_heteroclitus
ENSMAMG00000008919	prpf8	100	96.785	ENSGMOG00000002028	prpf8	99	96.785	Gadus_morhua
ENSMAMG00000008919	prpf8	100	97.861	ENSGALG00000002943	PRPF8	100	97.861	Gallus_gallus
ENSMAMG00000008919	prpf8	99	99.099	ENSGAFG00000010337	prpf8	99	99.099	Gambusia_affinis
ENSMAMG00000008919	prpf8	100	99.230	ENSGACG00000008504	prpf8	100	99.230	Gasterosteus_aculeatus
ENSMAMG00000008919	prpf8	100	97.819	ENSGAGG00000008350	PRPF8	100	97.819	Gopherus_agassizii
ENSMAMG00000008919	prpf8	100	97.776	ENSGGOG00000005516	PRPF8	100	97.776	Gorilla_gorilla
ENSMAMG00000008919	prpf8	100	99.016	ENSHBUG00000016192	prpf8	100	99.016	Haplochromis_burtoni
ENSMAMG00000008919	prpf8	100	97.776	ENSHGLG00000012029	PRPF8	100	97.776	Heterocephalus_glaber_female
ENSMAMG00000008919	prpf8	100	97.776	ENSHGLG00100016494	PRPF8	100	97.776	Heterocephalus_glaber_male
ENSMAMG00000008919	prpf8	100	98.974	ENSHCOG00000016414	prpf8	100	98.974	Hippocampus_comes
ENSMAMG00000008919	prpf8	100	98.931	ENSIPUG00000023230	prpf8	100	98.931	Ictalurus_punctatus
ENSMAMG00000008919	prpf8	100	97.776	ENSSTOG00000005128	PRPF8	100	97.776	Ictidomys_tridecemlineatus
ENSMAMG00000008919	prpf8	100	95.637	ENSJJAG00000021159	Prpf8	100	95.637	Jaculus_jaculus
ENSMAMG00000008919	prpf8	99	99.184	ENSKMAG00000016118	prpf8	99	99.184	Kryptolebias_marmoratus
ENSMAMG00000008919	prpf8	100	99.358	ENSLBEG00000026903	prpf8	100	99.358	Labrus_bergylta
ENSMAMG00000008919	prpf8	95	95.493	ENSLACG00000010479	PRPF8	99	98.261	Latimeria_chalumnae
ENSMAMG00000008919	prpf8	99	98.418	ENSLOCG00000005409	prpf8	99	98.418	Lepisosteus_oculatus
ENSMAMG00000008919	prpf8	100	97.776	ENSLAFG00000015445	PRPF8	100	97.776	Loxodonta_africana
ENSMAMG00000008919	prpf8	100	97.776	ENSMFAG00000039995	PRPF8	100	97.776	Macaca_fascicularis
ENSMAMG00000008919	prpf8	100	97.776	ENSMMUG00000004820	PRPF8	100	97.776	Macaca_mulatta
ENSMAMG00000008919	prpf8	100	97.776	ENSMNEG00000035713	PRPF8	100	97.776	Macaca_nemestrina
ENSMAMG00000008919	prpf8	100	97.776	ENSMLEG00000037937	PRPF8	100	97.776	Mandrillus_leucophaeus
ENSMAMG00000008919	prpf8	100	98.809	ENSMZEG00005015073	prpf8	100	98.809	Maylandia_zebra
ENSMAMG00000008919	prpf8	100	97.861	ENSMGAG00000004769	PRPF8	100	97.861	Meleagris_gallopavo
ENSMAMG00000008919	prpf8	100	97.776	ENSMICG00000010320	PRPF8	100	97.776	Microcebus_murinus
ENSMAMG00000008919	prpf8	100	97.776	ENSMOCG00000016838	Prpf8	100	97.776	Microtus_ochrogaster
ENSMAMG00000008919	prpf8	100	99.102	ENSMMOG00000011887	prpf8	100	99.102	Mola_mola
ENSMAMG00000008919	prpf8	100	97.565	ENSMODG00000010480	PRPF8	100	97.565	Monodelphis_domestica
ENSMAMG00000008919	prpf8	97	98.719	ENSMALG00000003558	prpf8	100	98.719	Monopterus_albus
ENSMAMG00000008919	prpf8	100	97.733	MGP_CAROLIEiJ_G0016740	Prpf8	100	97.733	Mus_caroli
ENSMAMG00000008919	prpf8	100	97.733	ENSMUSG00000020850	Prpf8	100	97.733	Mus_musculus
ENSMAMG00000008919	prpf8	100	97.690	MGP_PahariEiJ_G0017877	Prpf8	100	97.690	Mus_pahari
ENSMAMG00000008919	prpf8	100	97.733	MGP_SPRETEiJ_G0017583	Prpf8	100	97.733	Mus_spretus
ENSMAMG00000008919	prpf8	100	97.776	ENSMPUG00000013227	PRPF8	100	97.776	Mustela_putorius_furo
ENSMAMG00000008919	prpf8	100	97.651	ENSMLUG00000002666	PRPF8	100	97.651	Myotis_lucifugus
ENSMAMG00000008919	prpf8	100	96.022	ENSNGAG00000005305	Prpf8	100	96.022	Nannospalax_galili
ENSMAMG00000008919	prpf8	100	98.851	ENSNBRG00000013127	prpf8	100	98.851	Neolamprologus_brichardi
ENSMAMG00000008919	prpf8	97	96.822	ENSNLEG00000000897	PRPF8	98	96.822	Nomascus_leucogenys
ENSMAMG00000008919	prpf8	98	96.262	ENSMEUG00000015999	PRPF8	100	96.262	Notamacropus_eugenii
ENSMAMG00000008919	prpf8	100	96.022	ENSOPRG00000003102	PRPF8	100	95.937	Ochotona_princeps
ENSMAMG00000008919	prpf8	100	97.776	ENSODEG00000008468	PRPF8	100	97.776	Octodon_degus
ENSMAMG00000008919	prpf8	100	98.809	ENSONIG00000008153	prpf8	100	98.809	Oreochromis_niloticus
ENSMAMG00000008919	prpf8	82	99.159	ENSOANG00000004250	PRPF8	97	99.159	Ornithorhynchus_anatinus
ENSMAMG00000008919	prpf8	100	97.776	ENSOCUG00000000081	PRPF8	100	97.776	Oryctolagus_cuniculus
ENSMAMG00000008919	prpf8	100	98.386	ENSORLG00000008036	prpf8	100	98.386	Oryzias_latipes
ENSMAMG00000008919	prpf8	100	98.344	ENSORLG00020021070	prpf8	100	98.344	Oryzias_latipes_hni
ENSMAMG00000008919	prpf8	100	98.386	ENSORLG00015002340	prpf8	100	98.386	Oryzias_latipes_hsok
ENSMAMG00000008919	prpf8	100	96.899	ENSOMEG00000016866	prpf8	100	96.899	Oryzias_melastigma
ENSMAMG00000008919	prpf8	100	97.651	ENSOARG00000013312	PRPF8	100	97.651	Ovis_aries
ENSMAMG00000008919	prpf8	100	97.776	ENSPPAG00000042753	PRPF8	100	97.776	Pan_paniscus
ENSMAMG00000008919	prpf8	100	97.776	ENSPPRG00000008746	PRPF8	100	97.776	Panthera_pardus
ENSMAMG00000008919	prpf8	100	97.690	ENSPTIG00000019200	PRPF8	100	97.690	Panthera_tigris_altaica
ENSMAMG00000008919	prpf8	100	97.776	ENSPTRG00000039576	PRPF8	100	97.776	Pan_troglodytes
ENSMAMG00000008919	prpf8	98	98.175	ENSPANG00000024607	PRPF8	98	98.175	Papio_anubis
ENSMAMG00000008919	prpf8	100	98.551	ENSPKIG00000011201	prpf8	100	98.551	Paramormyrops_kingsleyae
ENSMAMG00000008919	prpf8	100	97.733	ENSPSIG00000013393	PRPF8	100	97.733	Pelodiscus_sinensis
ENSMAMG00000008919	prpf8	100	97.776	ENSPEMG00000021699	Prpf8	100	97.776	Peromyscus_maniculatus_bairdii
ENSMAMG00000008919	prpf8	96	93.987	ENSPMAG00000005438	prpf8	100	94.031	Petromyzon_marinus
ENSMAMG00000008919	prpf8	100	97.565	ENSPCIG00000022603	PRPF8	100	98.081	Phascolarctos_cinereus
ENSMAMG00000008919	prpf8	100	98.388	ENSPFOG00000007005	prpf8	100	98.346	Poecilia_formosa
ENSMAMG00000008919	prpf8	100	97.562	ENSPLAG00000020777	prpf8	100	97.562	Poecilia_latipinna
ENSMAMG00000008919	prpf8	100	98.388	ENSPMEG00000004051	prpf8	100	98.346	Poecilia_mexicana
ENSMAMG00000008919	prpf8	100	99.016	ENSPREG00000021902	prpf8	100	99.016	Poecilia_reticulata
ENSMAMG00000008919	prpf8	100	97.776	ENSPPYG00000007777	PRPF8	100	97.776	Pongo_abelii
ENSMAMG00000008919	prpf8	90	96.782	ENSPCAG00000008938	PRPF8	90	96.782	Procavia_capensis
ENSMAMG00000008919	prpf8	100	97.776	ENSPCOG00000015182	PRPF8	100	97.776	Propithecus_coquereli
ENSMAMG00000008919	prpf8	93	98.614	ENSPVAG00000002134	PRPF8	93	98.614	Pteropus_vampyrus
ENSMAMG00000008919	prpf8	100	99.016	ENSPNYG00000016356	prpf8	100	99.016	Pundamilia_nyererei
ENSMAMG00000008919	prpf8	100	99.145	ENSPNAG00000009247	prpf8	100	99.145	Pygocentrus_nattereri
ENSMAMG00000008919	prpf8	100	97.733	ENSRNOG00000003495	Prpf8	100	97.733	Rattus_norvegicus
ENSMAMG00000008919	prpf8	100	97.776	ENSRBIG00000031219	PRPF8	100	97.776	Rhinopithecus_bieti
ENSMAMG00000008919	prpf8	100	97.776	ENSRROG00000038014	PRPF8	100	97.776	Rhinopithecus_roxellana
ENSMAMG00000008919	prpf8	99	62.473	YHR165C	PRP8	95	62.559	Saccharomyces_cerevisiae
ENSMAMG00000008919	prpf8	100	97.776	ENSSBOG00000029717	PRPF8	100	97.776	Saimiri_boliviensis_boliviensis
ENSMAMG00000008919	prpf8	100	97.522	ENSSHAG00000006167	PRPF8	100	97.522	Sarcophilus_harrisii
ENSMAMG00000008919	prpf8	100	98.804	ENSSFOG00015013905	prpf8	100	98.804	Scleropages_formosus
ENSMAMG00000008919	prpf8	100	99.230	ENSSMAG00000017736	prpf8	100	99.230	Scophthalmus_maximus
ENSMAMG00000008919	prpf8	100	99.701	ENSSDUG00000003029	prpf8	100	99.701	Seriola_dumerili
ENSMAMG00000008919	prpf8	68	99.875	ENSSLDG00000017096	prpf8	100	99.875	Seriola_lalandi_dorsalis
ENSMAMG00000008919	prpf8	87	94.553	ENSSARG00000002892	PRPF8	87	94.553	Sorex_araneus
ENSMAMG00000008919	prpf8	100	97.565	ENSSPUG00000007463	PRPF8	100	97.565	Sphenodon_punctatus
ENSMAMG00000008919	prpf8	100	99.102	ENSSPAG00000015639	prpf8	100	99.102	Stegastes_partitus
ENSMAMG00000008919	prpf8	100	97.776	ENSSSCG00000017817	PRPF8	100	97.776	Sus_scrofa
ENSMAMG00000008919	prpf8	52	98.778	ENSTGUG00000015597	-	95	98.778	Taeniopygia_guttata
ENSMAMG00000008919	prpf8	100	97.861	ENSTGUG00000005648	-	100	97.861	Taeniopygia_guttata
ENSMAMG00000008919	prpf8	100	98.973	ENSTRUG00000015906	prpf8	100	98.973	Takifugu_rubripes
ENSMAMG00000008919	prpf8	95	99.462	ENSTNIG00000003460	prpf8	99	99.462	Tetraodon_nigroviridis
ENSMAMG00000008919	prpf8	93	98.979	ENSTBEG00000006431	PRPF8	93	98.979	Tupaia_belangeri
ENSMAMG00000008919	prpf8	100	97.177	ENSTTRG00000006869	PRPF8	100	97.177	Tursiops_truncatus
ENSMAMG00000008919	prpf8	54	96.672	ENSUAMG00000015644	-	96	96.672	Ursus_americanus
ENSMAMG00000008919	prpf8	100	97.519	ENSUMAG00000009385	PRPF8	100	97.519	Ursus_maritimus
ENSMAMG00000008919	prpf8	71	98.621	ENSVPAG00000006063	-	71	98.621	Vicugna_pacos
ENSMAMG00000008919	prpf8	100	97.776	ENSVVUG00000021695	PRPF8	99	97.776	Vulpes_vulpes
ENSMAMG00000008919	prpf8	100	97.520	ENSXETG00000022259	prpf8	100	97.520	Xenopus_tropicalis
ENSMAMG00000008919	prpf8	100	98.975	ENSXCOG00000012775	prpf8	100	98.975	Xiphophorus_couchianus
ENSMAMG00000008919	prpf8	100	98.932	ENSXMAG00000008505	prpf8	100	98.932	Xiphophorus_maculatus