EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000008980 (Gene tree)
Gene ID: 113140658
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 36625 bases
Position: chrOOHQ01000092.1:21925252-21961876
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000013231	Fox-1_C	PF12414.8	9e-38	1	1
ENSMAMP00000013231	RRM_1	PF00076.22	2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000013597	-	4365	-	ENSMAMP00000013231	445 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000008980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000008980's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000008980	-	100	70.105	ENSMAMG00000004293	rbfox2	100	67.019
ENSMAMG00000008980	-	67	58.589	ENSMAMG00000003142	rbfox1	72	60.137
ENSMAMG00000008980	-	68	59.236	ENSMAMG00000020600	-	76	57.003
ENSMAMG00000008980	-	69	58.013	ENSMAMG00000019480	rbfox1l	63	60.837
ENSMAMG00000008980	-	76	54.412	ENSMAMG00000019810	rbfox3b	72	61.569

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000008980	-	94	53.498	ENSG00000100320	RBFOX2	99	58.635	Homo_sapiens
ENSMAMG00000008980	-	100	92.617	ENSAPOG00000021561	-	100	91.946	Acanthochromis_polyacanthus
ENSMAMG00000008980	-	100	69.787	ENSAPOG00000004877	rbfox2	100	66.880	Acanthochromis_polyacanthus
ENSMAMG00000008980	-	64	67.492	ENSAMEG00000007228	RBFOX2	94	66.333	Ailuropoda_melanoleuca
ENSMAMG00000008980	-	51	71.121	ENSACIG00000001690	rbfox2	90	65.613	Amphilophus_citrinellus
ENSMAMG00000008980	-	100	69.574	ENSAOCG00000013752	rbfox2	100	66.453	Amphiprion_ocellaris
ENSMAMG00000008980	-	100	88.147	ENSAOCG00000015358	-	100	86.207	Amphiprion_ocellaris
ENSMAMG00000008980	-	100	69.787	ENSAPEG00000022359	rbfox2	100	67.238	Amphiprion_percula
ENSMAMG00000008980	-	100	88.147	ENSAPEG00000013905	-	100	86.207	Amphiprion_percula
ENSMAMG00000008980	-	100	69.296	ENSATEG00000021951	rbfox2	100	67.238	Anabas_testudineus
ENSMAMG00000008980	-	100	90.135	ENSATEG00000009959	-	100	88.565	Anabas_testudineus
ENSMAMG00000008980	-	75	62.735	ENSAPLG00000007609	RBFOX2	73	66.892	Anas_platyrhynchos
ENSMAMG00000008980	-	75	63.003	ENSACAG00000016535	RBFOX2	61	66.892	Anolis_carolinensis
ENSMAMG00000008980	-	65	67.077	ENSANAG00000015245	RBFOX2	99	63.354	Aotus_nancymaae
ENSMAMG00000008980	-	100	69.510	ENSACLG00000009744	rbfox2	100	67.452	Astatotilapia_calliptera
ENSMAMG00000008980	-	100	92.634	ENSACLG00000017380	-	100	90.848	Astatotilapia_calliptera
ENSMAMG00000008980	-	100	71.648	ENSAMXG00000011451	rbfox2	98	78.814	Astyanax_mexicanus
ENSMAMG00000008980	-	91	54.088	ENSBTAG00000020125	RBFOX2	93	57.838	Bos_taurus
ENSMAMG00000008980	-	75	61.804	ENSCJAG00000019456	-	93	55.405	Callithrix_jacchus
ENSMAMG00000008980	-	75	61.930	ENSCJAG00000038886	-	71	66.554	Callithrix_jacchus
ENSMAMG00000008980	-	75	61.930	ENSCAFG00000001701	RBFOX2	73	66.892	Canis_familiaris
ENSMAMG00000008980	-	91	54.334	ENSCHIG00000014027	RBFOX2	72	66.333	Capra_hircus
ENSMAMG00000008980	-	80	61.209	ENSTSYG00000014123	RBFOX2	89	57.951	Carlito_syrichta
ENSMAMG00000008980	-	61	67.483	ENSCAPG00000014308	RBFOX2	64	66.160	Cavia_aperea
ENSMAMG00000008980	-	64	68.025	ENSCPOG00000022180	RBFOX2	72	66.892	Cavia_porcellus
ENSMAMG00000008980	-	91	54.603	ENSCCAG00000036584	RBFOX2	73	66.892	Cebus_capucinus
ENSMAMG00000008980	-	75	62.198	ENSCATG00000038655	RBFOX2	92	56.131	Cercocebus_atys
ENSMAMG00000008980	-	75	59.517	ENSCLAG00000017106	RBFOX2	74	63.514	Chinchilla_lanigera
ENSMAMG00000008980	-	59	58.940	ENSCSAG00000008110	RBFOX2	75	57.966	Chlorocebus_sabaeus
ENSMAMG00000008980	-	61	59.677	ENSCHOG00000002887	RBFOX2	86	58.020	Choloepus_hoffmanni
ENSMAMG00000008980	-	75	62.466	ENSCPBG00000023144	RBFOX2	96	58.696	Chrysemys_picta_bellii
ENSMAMG00000008980	-	75	62.198	ENSCANG00000035832	RBFOX2	96	58.856	Colobus_angolensis_palliatus
ENSMAMG00000008980	-	92	54.412	ENSCGRG00001017727	Rbfox2	73	66.892	Cricetulus_griseus_chok1gshd
ENSMAMG00000008980	-	75	61.538	ENSCGRG00000014237	Rbfox2	73	66.333	Cricetulus_griseus_crigri
ENSMAMG00000008980	-	100	64.242	ENSCSEG00000007748	rbfox2	100	63.434	Cynoglossus_semilaevis
ENSMAMG00000008980	-	100	87.879	ENSCSEG00000007360	-	100	86.797	Cynoglossus_semilaevis
ENSMAMG00000008980	-	50	79.476	ENSCVAG00000004491	rbfox2	100	77.333	Cyprinodon_variegatus
ENSMAMG00000008980	-	81	77.507	ENSCVAG00000016503	-	97	76.965	Cyprinodon_variegatus
ENSMAMG00000008980	-	53	77.733	ENSDARG00000052182	rbfox2	100	76.955	Danio_rerio
ENSMAMG00000008980	-	75	61.892	ENSDNOG00000004372	RBFOX2	70	66.892	Dasypus_novemcinctus
ENSMAMG00000008980	-	75	56.836	ENSDORG00000015003	Rbfox2	76	62.500	Dipodomys_ordii
ENSMAMG00000008980	-	65	74.825	ENSETEG00000005638	RBFOX2	54	91.250	Echinops_telfairi
ENSMAMG00000008980	-	91	54.565	ENSEASG00005018920	RBFOX2	62	66.892	Equus_asinus_asinus
ENSMAMG00000008980	-	91	54.565	ENSECAG00000018923	RBFOX2	62	66.892	Equus_caballus
ENSMAMG00000008980	-	72	54.821	ENSEEUG00000004549	RBFOX2	71	58.392	Erinaceus_europaeus
ENSMAMG00000008980	-	53	74.689	ENSELUG00000000102	rbfox2	100	73.859	Esox_lucius
ENSMAMG00000008980	-	100	73.006	ENSELUG00000009404	-	100	70.988	Esox_lucius
ENSMAMG00000008980	-	91	54.184	ENSFCAG00000010061	RBFOX2	90	55.586	Felis_catus
ENSMAMG00000008980	-	75	62.466	ENSFALG00000013111	RBFOX2	72	66.892	Ficedula_albicollis
ENSMAMG00000008980	-	100	70.299	ENSFHEG00000010546	rbfox2	100	66.667	Fundulus_heteroclitus
ENSMAMG00000008980	-	81	57.732	ENSGMOG00000005278	rbfox2	97	57.441	Gadus_morhua
ENSMAMG00000008980	-	57	58.333	ENSGALG00000012540	RBFOX2	54	67.290	Gallus_gallus
ENSMAMG00000008980	-	50	79.825	ENSGAFG00000008448	rbfox2	100	77.232	Gambusia_affinis
ENSMAMG00000008980	-	51	81.304	ENSGAFG00000017428	-	95	81.304	Gambusia_affinis
ENSMAMG00000008980	-	81	60.804	ENSGACG00000015968	rbfox2	97	60.000	Gasterosteus_aculeatus
ENSMAMG00000008980	-	81	68.831	ENSGACG00000007174	-	97	70.757	Gasterosteus_aculeatus
ENSMAMG00000008980	-	75	62.466	ENSGAGG00000025884	RBFOX2	91	58.696	Gopherus_agassizii
ENSMAMG00000008980	-	91	54.008	ENSGGOG00000037332	RBFOX2	73	66.892	Gorilla_gorilla
ENSMAMG00000008980	-	100	90.402	ENSHBUG00000000856	-	100	87.742	Haplochromis_burtoni
ENSMAMG00000008980	-	100	69.510	ENSHBUG00000004356	rbfox2	100	67.452	Haplochromis_burtoni
ENSMAMG00000008980	-	94	51.546	ENSHGLG00000012907	RBFOX2	74	66.892	Heterocephalus_glaber_female
ENSMAMG00000008980	-	75	61.538	ENSHGLG00100009986	RBFOX2	73	66.333	Heterocephalus_glaber_male
ENSMAMG00000008980	-	100	68.298	ENSHCOG00000016102	rbfox2	100	65.739	Hippocampus_comes
ENSMAMG00000008980	-	100	83.298	ENSHCOG00000005662	-	100	81.799	Hippocampus_comes
ENSMAMG00000008980	-	100	63.941	ENSIPUG00000016896	rbfox2	93	71.528	Ictalurus_punctatus
ENSMAMG00000008980	-	75	59.249	ENSSTOG00000014841	RBFOX2	73	63.514	Ictidomys_tridecemlineatus
ENSMAMG00000008980	-	75	59.783	ENSJJAG00000014885	Rbfox2	73	65.541	Jaculus_jaculus
ENSMAMG00000008980	-	100	68.511	ENSKMAG00000021880	-	100	67.167	Kryptolebias_marmoratus
ENSMAMG00000008980	-	100	86.170	ENSKMAG00000013354	-	98	92.500	Kryptolebias_marmoratus
ENSMAMG00000008980	-	69	58.960	ENSLACG00000003339	RBFOX2	79	57.716	Latimeria_chalumnae
ENSMAMG00000008980	-	75	60.212	ENSLAFG00000027140	RBFOX2	93	57.412	Loxodonta_africana
ENSMAMG00000008980	-	75	62.198	ENSMFAG00000031994	RBFOX2	86	58.856	Macaca_fascicularis
ENSMAMG00000008980	-	75	62.198	ENSMMUG00000014010	RBFOX2	96	58.856	Macaca_mulatta
ENSMAMG00000008980	-	75	62.198	ENSMNEG00000034388	RBFOX2	86	55.795	Macaca_nemestrina
ENSMAMG00000008980	-	75	62.198	ENSMLEG00000005854	RBFOX2	89	58.491	Mandrillus_leucophaeus
ENSMAMG00000008980	-	100	67.308	ENSMZEG00005023838	rbfox2	100	64.693	Maylandia_zebra
ENSMAMG00000008980	-	100	90.179	ENSMZEG00005004959	-	100	87.473	Maylandia_zebra
ENSMAMG00000008980	-	80	58.690	ENSMAUG00000018816	Rbfox2	73	63.514	Mesocricetus_auratus
ENSMAMG00000008980	-	62	47.115	ENSMICG00000046341	-	50	53.738	Microcebus_murinus
ENSMAMG00000008980	-	94	53.673	ENSMICG00000035417	RBFOX2	73	66.333	Microcebus_murinus
ENSMAMG00000008980	-	75	59.189	ENSMOCG00000009327	Rbfox2	73	63.514	Microtus_ochrogaster
ENSMAMG00000008980	-	53	71.667	ENSMMOG00000008287	rbfox2	100	69.198	Mola_mola
ENSMAMG00000008980	-	75	60.465	ENSMODG00000001122	RBFOX2	76	64.194	Monodelphis_domestica
ENSMAMG00000008980	-	53	81.893	ENSMALG00000000623	rbfox2	100	80.335	Monopterus_albus
ENSMAMG00000008980	-	75	61.725	MGP_CAROLIEiJ_G0019957	Rbfox2	73	66.892	Mus_caroli
ENSMAMG00000008980	-	75	61.725	ENSMUSG00000033565	Rbfox2	73	66.892	Mus_musculus
ENSMAMG00000008980	-	75	61.725	MGP_PahariEiJ_G0019967	Rbfox2	73	66.892	Mus_pahari
ENSMAMG00000008980	-	75	61.725	MGP_SPRETEiJ_G0020860	Rbfox2	73	66.892	Mus_spretus
ENSMAMG00000008980	-	75	61.538	ENSMPUG00000012555	RBFOX2	86	57.951	Mustela_putorius_furo
ENSMAMG00000008980	-	75	60.263	ENSMLUG00000002676	RBFOX2	70	65.677	Myotis_lucifugus
ENSMAMG00000008980	-	64	64.375	ENSNGAG00000020528	Rbfox2	73	63.514	Nannospalax_galili
ENSMAMG00000008980	-	100	69.787	ENSNBRG00000018155	rbfox2	100	67.880	Neolamprologus_brichardi
ENSMAMG00000008980	-	84	88.747	ENSNBRG00000001568	-	89	86.667	Neolamprologus_brichardi
ENSMAMG00000008980	-	75	61.170	ENSNLEG00000034979	RBFOX2	96	54.645	Nomascus_leucogenys
ENSMAMG00000008980	-	75	59.151	ENSMEUG00000001547	RBFOX2	75	62.333	Notamacropus_eugenii
ENSMAMG00000008980	-	66	78.723	ENSOPRG00000014878	RBFOX2	50	73.856	Ochotona_princeps
ENSMAMG00000008980	-	75	58.602	ENSODEG00000009937	RBFOX2	73	63.514	Octodon_degus
ENSMAMG00000008980	-	81	64.179	ENSONIG00000017998	rbfox2	95	62.563	Oreochromis_niloticus
ENSMAMG00000008980	-	81	80.357	ENSONIG00000008341	-	96	80.357	Oreochromis_niloticus
ENSMAMG00000008980	-	59	60.403	ENSOANG00000007489	RBFOX2	88	59.524	Ornithorhynchus_anatinus
ENSMAMG00000008980	-	75	53.298	ENSOCUG00000001349	RBFOX2	69	55.667	Oryctolagus_cuniculus
ENSMAMG00000008980	-	100	68.432	ENSORLG00000028082	rbfox2	100	66.167	Oryzias_latipes
ENSMAMG00000008980	-	100	84.764	ENSORLG00000014948	-	100	83.906	Oryzias_latipes
ENSMAMG00000008980	-	100	84.764	ENSORLG00020005676	-	100	83.906	Oryzias_latipes_hni
ENSMAMG00000008980	-	100	68.365	ENSORLG00020008976	rbfox2	100	66.167	Oryzias_latipes_hni
ENSMAMG00000008980	-	100	68.365	ENSORLG00015007027	rbfox2	100	66.167	Oryzias_latipes_hsok
ENSMAMG00000008980	-	100	84.764	ENSORLG00015000797	-	100	83.691	Oryzias_latipes_hsok
ENSMAMG00000008980	-	100	68.936	ENSOMEG00000015966	rbfox2	100	66.381	Oryzias_melastigma
ENSMAMG00000008980	-	100	86.667	ENSOMEG00000007909	-	100	86.667	Oryzias_melastigma
ENSMAMG00000008980	-	75	61.538	ENSOGAG00000033250	RBFOX2	74	66.333	Otolemur_garnettii
ENSMAMG00000008980	-	75	60.800	ENSOARG00000018669	RBFOX2	73	63.545	Ovis_aries
ENSMAMG00000008980	-	75	62.198	ENSPPAG00000035653	RBFOX2	86	58.491	Pan_paniscus
ENSMAMG00000008980	-	91	54.184	ENSPPRG00000015635	RBFOX2	96	58.311	Panthera_pardus
ENSMAMG00000008980	-	75	61.538	ENSPTIG00000019147	RBFOX2	92	57.951	Panthera_tigris_altaica
ENSMAMG00000008980	-	91	54.008	ENSPTRG00000014305	RBFOX2	73	66.892	Pan_troglodytes
ENSMAMG00000008980	-	91	54.140	ENSPANG00000007030	RBFOX2	91	56.065	Papio_anubis
ENSMAMG00000008980	-	59	66.782	ENSPKIG00000010816	-	79	61.830	Paramormyrops_kingsleyae
ENSMAMG00000008980	-	100	67.920	ENSPKIG00000006854	-	100	65.256	Paramormyrops_kingsleyae
ENSMAMG00000008980	-	75	61.930	ENSPSIG00000017828	RBFOX2	91	58.967	Pelodiscus_sinensis
ENSMAMG00000008980	-	53	78.512	ENSPMGG00000007138	rbfox2	100	76.371	Periophthalmus_magnuspinnatus
ENSMAMG00000008980	-	64	83.681	ENSPMGG00000016969	-	86	83.624	Periophthalmus_magnuspinnatus
ENSMAMG00000008980	-	75	59.189	ENSPEMG00000012542	Rbfox2	73	63.514	Peromyscus_maniculatus_bairdii
ENSMAMG00000008980	-	75	62.567	ENSPCIG00000021550	RBFOX2	77	66.667	Phascolarctos_cinereus
ENSMAMG00000008980	-	100	69.639	ENSPFOG00000014209	rbfox2	100	66.809	Poecilia_formosa
ENSMAMG00000008980	-	72	91.331	ENSPFOG00000001869	-	100	91.950	Poecilia_formosa
ENSMAMG00000008980	-	53	95.816	ENSPLAG00000002710	-	100	95.816	Poecilia_latipinna
ENSMAMG00000008980	-	53	79.167	ENSPLAG00000017308	rbfox2	100	76.987	Poecilia_latipinna
ENSMAMG00000008980	-	53	95.417	ENSPMEG00000013663	-	100	95.417	Poecilia_mexicana
ENSMAMG00000008980	-	53	80.658	ENSPMEG00000007320	rbfox2	100	79.079	Poecilia_mexicana
ENSMAMG00000008980	-	53	78.189	ENSPREG00000012955	rbfox2	100	76.891	Poecilia_reticulata
ENSMAMG00000008980	-	91	54.008	ENSPPYG00000011766	RBFOX2	77	58.491	Pongo_abelii
ENSMAMG00000008980	-	75	57.909	ENSPCOG00000016273	RBFOX2	73	61.824	Propithecus_coquereli
ENSMAMG00000008980	-	53	67.647	ENSPVAG00000015844	RBFOX2	66	62.454	Pteropus_vampyrus
ENSMAMG00000008980	-	100	89.462	ENSPNYG00000020595	-	100	87.957	Pundamilia_nyererei
ENSMAMG00000008980	-	100	70.000	ENSPNYG00000016161	rbfox2	100	68.308	Pundamilia_nyererei
ENSMAMG00000008980	-	100	63.559	ENSPNAG00000000168	rbfox2	100	61.456	Pygocentrus_nattereri
ENSMAMG00000008980	-	99	61.148	ENSPNAG00000014196	-	100	60.976	Pygocentrus_nattereri
ENSMAMG00000008980	-	75	61.333	ENSRNOG00000004688	Rbfox2	69	63.514	Rattus_norvegicus
ENSMAMG00000008980	-	75	62.198	ENSRBIG00000033696	RBFOX2	91	56.131	Rhinopithecus_bieti
ENSMAMG00000008980	-	91	54.008	ENSRROG00000035715	RBFOX2	96	55.795	Rhinopithecus_roxellana
ENSMAMG00000008980	-	75	62.198	ENSSBOG00000028291	RBFOX2	74	66.892	Saimiri_boliviensis_boliviensis
ENSMAMG00000008980	-	75	62.567	ENSSHAG00000006835	RBFOX2	86	58.808	Sarcophilus_harrisii
ENSMAMG00000008980	-	100	67.249	ENSSFOG00015010482	-	97	68.207	Scleropages_formosus
ENSMAMG00000008980	-	52	77.253	ENSSFOG00015013291	-	74	76.957	Scleropages_formosus
ENSMAMG00000008980	-	100	82.869	ENSSMAG00000004317	-	100	81.857	Scophthalmus_maximus
ENSMAMG00000008980	-	100	68.870	ENSSMAG00000013662	rbfox2	100	67.167	Scophthalmus_maximus
ENSMAMG00000008980	-	100	88.578	ENSSDUG00000009511	-	100	87.716	Seriola_dumerili
ENSMAMG00000008980	-	100	69.936	ENSSDUG00000004292	rbfox2	100	68.094	Seriola_dumerili
ENSMAMG00000008980	-	85	69.500	ENSSLDG00000023983	rbfox2	83	69.289	Seriola_lalandi_dorsalis
ENSMAMG00000008980	-	100	88.362	ENSSLDG00000018052	-	100	87.716	Seriola_lalandi_dorsalis
ENSMAMG00000008980	-	56	58.099	ENSSPUG00000011797	RBFOX2	74	56.738	Sphenodon_punctatus
ENSMAMG00000008980	-	100	69.787	ENSSPAG00000013681	rbfox2	100	67.238	Stegastes_partitus
ENSMAMG00000008980	-	100	88.793	ENSSPAG00000016272	-	100	88.793	Stegastes_partitus
ENSMAMG00000008980	-	75	61.290	ENSSSCG00000000152	RBFOX2	73	66.892	Sus_scrofa
ENSMAMG00000008980	-	75	62.466	ENSTGUG00000010808	RBFOX2	75	66.892	Taeniopygia_guttata
ENSMAMG00000008980	-	81	66.753	ENSTRUG00000007739	-	95	66.316	Takifugu_rubripes
ENSMAMG00000008980	-	57	79.661	ENSTBEG00000003297	-	58	90.000	Tupaia_belangeri
ENSMAMG00000008980	-	75	61.538	ENSTTRG00000006922	RBFOX2	89	57.951	Tursiops_truncatus
ENSMAMG00000008980	-	73	60.109	ENSUAMG00000010612	RBFOX2	88	56.389	Ursus_americanus
ENSMAMG00000008980	-	59	59.060	ENSUMAG00000016785	RBFOX2	73	58.076	Ursus_maritimus
ENSMAMG00000008980	-	75	56.233	ENSVPAG00000002824	RBFOX2	89	53.639	Vicugna_pacos
ENSMAMG00000008980	-	75	61.662	ENSVVUG00000023561	RBFOX2	74	66.333	Vulpes_vulpes
ENSMAMG00000008980	-	69	62.899	ENSXETG00000000231	rbfox2	75	63.973	Xenopus_tropicalis
ENSMAMG00000008980	-	60	95.349	ENSXCOG00000015905	-	83	95.349	Xiphophorus_couchianus
ENSMAMG00000008980	-	83	70.635	ENSXMAG00000029498	rbfox2	91	69.251	Xiphophorus_maculatus
ENSMAMG00000008980	-	100	84.120	ENSXMAG00000026769	-	100	83.906	Xiphophorus_maculatus