EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAMG00000009256 (Gene tree)
Gene ID
113140697
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Minus strand
Length
14598 bases
Position
chrOOHQ01000092.1:22208045-22222642
Accession
113140697
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000013806ResIIIPF04851.155.8e-0911
ENSMAMP00000013764ResIIIPF04851.156e-0911
ENSMAMP00000013806BRKPF07533.166.6e-1711
ENSMAMP00000013764BRKPF07533.167e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000014184-4743-ENSMAMP000000138061580 (aa)--
ENSMAMT00000014142-5836-ENSMAMP000000137641627 (aa)XP_026180413UPI000E45930C
Gene Model
Click here to download ENSMAMG00000009256's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000009256's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAMG00000009256smarca4a9888.796ENSMAMG00000002841-9888.158
ENSMAMG00000009256smarca4a9970.785ENSMAMG00000003056SMARCA29572.262
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000009256smarca4a10087.333ENSG00000127616SMARCA499100.000Homo_sapiens
ENSMAMG00000009256smarca4a7994.104ENSAPOG00000003509smarca4a9994.104Acanthochromis_polyacanthus
ENSMAMG00000009256smarca4a9489.416ENSAPOG00000004542SMARCA49985.255Acanthochromis_polyacanthus
ENSMAMG00000009256smarca4a10083.177ENSAMEG00000010868SMARCA410083.118Ailuropoda_melanoleuca
ENSMAMG00000009256smarca4a9996.788ENSACIG00000021550smarca4a9996.788Amphilophus_citrinellus
ENSMAMG00000009256smarca4a9486.262ENSACIG00000003035-9786.469Amphilophus_citrinellus
ENSMAMG00000009256smarca4a9092.793ENSAOCG00000019167smarca4a10092.793Amphiprion_ocellaris
ENSMAMG00000009256smarca4a9387.326ENSAOCG00000009450-9787.401Amphiprion_ocellaris
ENSMAMG00000009256smarca4a9888.633ENSAPEG00000023108-9686.711Amphiprion_percula
ENSMAMG00000009256smarca4a9092.931ENSAPEG00000015559smarca4a10092.931Amphiprion_percula
ENSMAMG00000009256smarca4a10097.055ENSATEG00000011524smarca4a10097.055Anabas_testudineus
ENSMAMG00000009256smarca4a9985.706ENSATEG00000001094-9984.964Anabas_testudineus
ENSMAMG00000009256smarca4a9987.345ENSANAG00000036991SMARCA410084.160Aotus_nancymaae
ENSMAMG00000009256smarca4a9994.475ENSACLG00000000163smarca4a9895.939Astatotilapia_calliptera
ENSMAMG00000009256smarca4a9490.132ENSACLG00000008638-9885.023Astatotilapia_calliptera
ENSMAMG00000009256smarca4a9886.667ENSAMXG00000021023smarca4a9886.428Astyanax_mexicanus
ENSMAMG00000009256smarca4a9487.378ENSAMXG00000011238-9685.912Astyanax_mexicanus
ENSMAMG00000009256smarca4a10087.829ENSBTAG00000019220SMARCA49887.539Bos_taurus
ENSMAMG00000009256smarca4a10083.255ENSCJAG00000005936SMARCA410083.489Callithrix_jacchus
ENSMAMG00000009256smarca4a10087.158ENSCAFG00000017584SMARCA410087.279Canis_familiaris
ENSMAMG00000009256smarca4a10086.251ENSCAFG00020024620SMARCA49987.279Canis_lupus_dingo
ENSMAMG00000009256smarca4a10084.117ENSCHIG00000015318SMARCA410083.182Capra_hircus
ENSMAMG00000009256smarca4a10087.462ENSTSYG00000012966SMARCA410087.584Carlito_syrichta
ENSMAMG00000009256smarca4a9481.491ENSCAPG00000015932SMARCA49490.451Cavia_aperea
ENSMAMG00000009256smarca4a10087.158ENSCPOG00000015549SMARCA410087.279Cavia_porcellus
ENSMAMG00000009256smarca4a10084.252ENSCCAG00000031660SMARCA49984.494Cebus_capucinus
ENSMAMG00000009256smarca4a10087.279ENSCATG00000029530SMARCA410087.340Cercocebus_atys
ENSMAMG00000009256smarca4a10087.454ENSCLAG00000011946SMARCA410087.576Chinchilla_lanigera
ENSMAMG00000009256smarca4a10087.264ENSCPBG00000009994SMARCA410087.020Chrysemys_picta_bellii
ENSMAMG00000009256smarca4a10087.219ENSCANG00000036013SMARCA410087.340Colobus_angolensis_palliatus
ENSMAMG00000009256smarca4a10086.975ENSCGRG00001016732Smarca410087.036Cricetulus_griseus_chok1gshd
ENSMAMG00000009256smarca4a10086.975ENSCGRG00000017242Smarca410087.036Cricetulus_griseus_crigri
ENSMAMG00000009256smarca4a9695.102ENSCSEG00000014771smarca4a10095.153Cynoglossus_semilaevis
ENSMAMG00000009256smarca4a9993.727ENSCVAG00000006979smarca4a9993.727Cyprinodon_variegatus
ENSMAMG00000009256smarca4a9984.158ENSCVAG00000003018-9884.921Cyprinodon_variegatus
ENSMAMG00000009256smarca4a9284.621ENSDARG00000104339SMARCA49484.980Danio_rerio
ENSMAMG00000009256smarca4a10090.409ENSDARG00000077226smarca4a10090.104Danio_rerio
ENSMAMG00000009256smarca4a10078.935ENSDNOG00000048847SMARCA49090.801Dasypus_novemcinctus
ENSMAMG00000009256smarca4a8482.225ENSDORG00000002544Smarca49579.480Dipodomys_ordii
ENSMAMG00000009256smarca4a9476.673ENSETEG00000013361SMARCA49476.036Echinops_telfairi
ENSMAMG00000009256smarca4a10086.975ENSEASG00005006167SMARCA410085.101Equus_asinus_asinus
ENSMAMG00000009256smarca4a10087.036ENSECAG00000008334SMARCA410087.097Equus_caballus
ENSMAMG00000009256smarca4a10090.407ENSELUG00000010247smarca4a10089.617Esox_lucius
ENSMAMG00000009256smarca4a9981.158ENSELUG00000023232-9683.792Esox_lucius
ENSMAMG00000009256smarca4a10086.999ENSFCAG00000004894SMARCA410087.060Felis_catus
ENSMAMG00000009256smarca4a9184.182ENSFALG00000004208SMARCA49286.124Ficedula_albicollis
ENSMAMG00000009256smarca4a9287.259ENSFDAG00000012237SMARCA49787.584Fukomys_damarensis
ENSMAMG00000009256smarca4a9692.763ENSFHEG00000010182smarca4a10092.775Fundulus_heteroclitus
ENSMAMG00000009256smarca4a10085.269ENSFHEG00000007902-9786.200Fundulus_heteroclitus
ENSMAMG00000009256smarca4a9080.928ENSGMOG00000005756-9080.052Gadus_morhua
ENSMAMG00000009256smarca4a8894.068ENSGMOG00000002649smarca4a9490.179Gadus_morhua
ENSMAMG00000009256smarca4a7386.722ENSGALG00000047145SMARCA410086.356Gallus_gallus
ENSMAMG00000009256smarca4a9092.530ENSGAFG00000014900smarca4a9993.653Gambusia_affinis
ENSMAMG00000009256smarca4a9882.353ENSGAFG00000008827-9884.100Gambusia_affinis
ENSMAMG00000009256smarca4a9980.276ENSGACG00000016033-9979.640Gasterosteus_aculeatus
ENSMAMG00000009256smarca4a9893.742ENSGACG00000006691smarca4a10093.337Gasterosteus_aculeatus
ENSMAMG00000009256smarca4a10087.485ENSGAGG00000016757SMARCA410087.241Gopherus_agassizii
ENSMAMG00000009256smarca4a10087.279ENSGGOG00000009882SMARCA410087.340Gorilla_gorilla
ENSMAMG00000009256smarca4a10096.076ENSHBUG00000021172smarca4a10096.076Haplochromis_burtoni
ENSMAMG00000009256smarca4a9890.056ENSHBUG00000005447-9687.585Haplochromis_burtoni
ENSMAMG00000009256smarca4a10086.545ENSHGLG00000010519SMARCA410086.667Heterocephalus_glaber_female
ENSMAMG00000009256smarca4a10086.505ENSHGLG00100013774SMARCA410086.322Heterocephalus_glaber_male
ENSMAMG00000009256smarca4a9595.607ENSHCOG00000009510smarca4a9695.677Hippocampus_comes
ENSMAMG00000009256smarca4a10090.409ENSIPUG00000006107smarca4a10089.921Ictalurus_punctatus
ENSMAMG00000009256smarca4a9885.312ENSIPUG00000016346-9486.071Ictalurus_punctatus
ENSMAMG00000009256smarca4a10087.036ENSSTOG00000007939SMARCA410087.097Ictidomys_tridecemlineatus
ENSMAMG00000009256smarca4a10085.442ENSJJAG00000012877Smarca410084.785Jaculus_jaculus
ENSMAMG00000009256smarca4a9488.193ENSKMAG00000019518-9888.053Kryptolebias_marmoratus
ENSMAMG00000009256smarca4a10094.237ENSKMAG00000011931smarca4a10094.114Kryptolebias_marmoratus
ENSMAMG00000009256smarca4a9591.860ENSLBEG00000017383smarca4a9791.254Labrus_bergylta
ENSMAMG00000009256smarca4a9581.337ENSLBEG00000020655-9881.493Labrus_bergylta
ENSMAMG00000009256smarca4a5280.516ENSLACG00000015309SMARCA410081.378Latimeria_chalumnae
ENSMAMG00000009256smarca4a10086.781ENSLOCG00000007820smarca4a9986.536Lepisosteus_oculatus
ENSMAMG00000009256smarca4a10087.060ENSLAFG00000001433SMARCA410087.120Loxodonta_africana
ENSMAMG00000009256smarca4a10086.372ENSMFAG00000032146SMARCA49987.340Macaca_fascicularis
ENSMAMG00000009256smarca4a10087.279ENSMMUG00000012042SMARCA410087.340Macaca_mulatta
ENSMAMG00000009256smarca4a10087.325ENSMNEG00000028512SMARCA410087.386Macaca_nemestrina
ENSMAMG00000009256smarca4a10087.120ENSMLEG00000034976SMARCA410087.120Mandrillus_leucophaeus
ENSMAMG00000009256smarca4a10095.956ENSMZEG00005003889smarca4a10095.956Maylandia_zebra
ENSMAMG00000009256smarca4a9490.862ENSMZEG00005023861-9588.269Maylandia_zebra
ENSMAMG00000009256smarca4a10086.695ENSMAUG00000020731Smarca410086.756Mesocricetus_auratus
ENSMAMG00000009256smarca4a10087.060ENSMICG00000009806SMARCA410087.120Microcebus_murinus
ENSMAMG00000009256smarca4a10086.817ENSMOCG00000022209Smarca410086.877Microtus_ochrogaster
ENSMAMG00000009256smarca4a9794.237ENSMMOG00000007571smarca4a10094.237Mola_mola
ENSMAMG00000009256smarca4a9982.944ENSMMOG00000008466-9882.446Mola_mola
ENSMAMG00000009256smarca4a10085.945ENSMODG00000006287SMARCA410085.287Monodelphis_domestica
ENSMAMG00000009256smarca4a8984.089ENSMALG00000021534-9984.599Monopterus_albus
ENSMAMG00000009256smarca4a10096.444ENSMALG00000003388smarca4a10096.444Monopterus_albus
ENSMAMG00000009256smarca4a10087.089MGP_CAROLIEiJ_G0031879Smarca410087.150Mus_caroli
ENSMAMG00000009256smarca4a10087.089ENSMUSG00000032187Smarca410087.150Mus_musculus
ENSMAMG00000009256smarca4a10087.531MGP_PahariEiJ_G0014745Smarca410087.408Mus_pahari
ENSMAMG00000009256smarca4a10087.089MGP_SPRETEiJ_G0033003Smarca410087.150Mus_spretus
ENSMAMG00000009256smarca4a10087.158ENSMPUG00000005711SMARCA410087.219Mustela_putorius_furo
ENSMAMG00000009256smarca4a10087.523ENSMLUG00000004491-10087.028Myotis_lucifugus
ENSMAMG00000009256smarca4a10087.370ENSNGAG00000021852Smarca410087.248Nannospalax_galili
ENSMAMG00000009256smarca4a9792.181ENSNBRG00000011457smarca4a9892.430Neolamprologus_brichardi
ENSMAMG00000009256smarca4a8984.631ENSNBRG00000018865-9984.819Neolamprologus_brichardi
ENSMAMG00000009256smarca4a9584.730ENSNLEG00000012389SMARCA49484.831Nomascus_leucogenys
ENSMAMG00000009256smarca4a8093.103ENSOPRG00000000885-7893.103Ochotona_princeps
ENSMAMG00000009256smarca4a10084.909ENSODEG00000017127SMARCA410084.517Octodon_degus
ENSMAMG00000009256smarca4a9890.268ENSONIG00000018040-9687.788Oreochromis_niloticus
ENSMAMG00000009256smarca4a10096.015ENSONIG00000008196smarca4a10096.015Oreochromis_niloticus
ENSMAMG00000009256smarca4a9781.708ENSOCUG00000001787SMARCA49881.314Oryctolagus_cuniculus
ENSMAMG00000009256smarca4a9789.477ENSORLG00000003955-9687.893Oryzias_latipes
ENSMAMG00000009256smarca4a10093.930ENSORLG00000015452smarca4a10093.378Oryzias_latipes
ENSMAMG00000009256smarca4a9889.429ENSORLG00020009728-9687.517Oryzias_latipes_hni
ENSMAMG00000009256smarca4a10093.562ENSORLG00020004611smarca4a10093.378Oryzias_latipes_hni
ENSMAMG00000009256smarca4a10093.562ENSORLG00015016560smarca4a10093.317Oryzias_latipes_hsok
ENSMAMG00000009256smarca4a9889.492ENSORLG00015007739-9585.063Oryzias_latipes_hsok
ENSMAMG00000009256smarca4a9889.570ENSOMEG00000016626-9687.653Oryzias_melastigma
ENSMAMG00000009256smarca4a10094.472ENSOMEG00000007486smarca4a10094.349Oryzias_melastigma
ENSMAMG00000009256smarca4a8986.119ENSOGAG00000016148SMARCA410085.487Otolemur_garnettii
ENSMAMG00000009256smarca4a10087.225ENSOARG00000017454SMARCA49887.163Ovis_aries
ENSMAMG00000009256smarca4a10087.279ENSPPAG00000043191SMARCA410087.340Pan_paniscus
ENSMAMG00000009256smarca4a10086.999ENSPPRG00000000064SMARCA410087.060Panthera_pardus
ENSMAMG00000009256smarca4a10087.279ENSPTRG00000010488SMARCA410087.340Pan_troglodytes
ENSMAMG00000009256smarca4a10086.477ENSPANG00000011042SMARCA49987.447Papio_anubis
ENSMAMG00000009256smarca4a10086.389ENSPKIG00000010087-9886.880Paramormyrops_kingsleyae
ENSMAMG00000009256smarca4a10090.159ENSPKIG00000007770SMARCA410090.190Paramormyrops_kingsleyae
ENSMAMG00000009256smarca4a10082.198ENSPSIG00000005547SMARCA410081.655Pelodiscus_sinensis
ENSMAMG00000009256smarca4a10086.877ENSPEMG00000020389Smarca410086.938Peromyscus_maniculatus_bairdii
ENSMAMG00000009256smarca4a10087.561ENSPCIG00000017138SMARCA410087.439Phascolarctos_cinereus
ENSMAMG00000009256smarca4a9888.873ENSPFOG00000012930-9687.984Poecilia_formosa
ENSMAMG00000009256smarca4a10091.738ENSPFOG00000007892smarca4a10092.588Poecilia_formosa
ENSMAMG00000009256smarca4a9985.599ENSPLAG00000018616-9886.490Poecilia_latipinna
ENSMAMG00000009256smarca4a10091.798ENSPLAG00000014294smarca4a10092.649Poecilia_latipinna
ENSMAMG00000009256smarca4a9585.696ENSPMEG00000008929-9885.596Poecilia_mexicana
ENSMAMG00000009256smarca4a9592.204ENSPMEG00000003725smarca4a9792.843Poecilia_mexicana
ENSMAMG00000009256smarca4a10091.465ENSPREG00000014608smarca4a10091.889Poecilia_reticulata
ENSMAMG00000009256smarca4a9585.255ENSPREG00000014823-9388.464Poecilia_reticulata
ENSMAMG00000009256smarca4a10085.322ENSPPYG00000009568SMARCA410085.084Pongo_abelii
ENSMAMG00000009256smarca4a7986.755ENSPCAG00000014054SMARCA47592.188Procavia_capensis
ENSMAMG00000009256smarca4a10086.999ENSPCOG00000023011SMARCA410087.060Propithecus_coquereli
ENSMAMG00000009256smarca4a9682.585ENSPVAG00000007787SMARCA49681.115Pteropus_vampyrus
ENSMAMG00000009256smarca4a9796.190ENSPNYG00000000717smarca4a9896.190Pundamilia_nyererei
ENSMAMG00000009256smarca4a9485.790ENSPNYG00000023995-9885.809Pundamilia_nyererei
ENSMAMG00000009256smarca4a9587.444ENSPNAG00000006636-9387.366Pygocentrus_nattereri
ENSMAMG00000009256smarca4a9884.814ENSPNAG00000024136smarca4a9786.696Pygocentrus_nattereri
ENSMAMG00000009256smarca4a10087.089ENSRNOG00000009271Smarca410087.150Rattus_norvegicus
ENSMAMG00000009256smarca4a10086.311ENSRBIG00000038696SMARCA49987.279Rhinopithecus_bieti
ENSMAMG00000009256smarca4a10087.219ENSRROG00000045509SMARCA410087.279Rhinopithecus_roxellana
ENSMAMG00000009256smarca4a10087.028ENSSBOG00000026896SMARCA49690.449Saimiri_boliviensis_boliviensis
ENSMAMG00000009256smarca4a10087.561ENSSHAG00000001642SMARCA410087.439Sarcophilus_harrisii
ENSMAMG00000009256smarca4a9684.713ENSSFOG00015009921-9491.071Scleropages_formosus
ENSMAMG00000009256smarca4a10090.954ENSSFOG00015013823smarca410090.526Scleropages_formosus
ENSMAMG00000009256smarca4a10094.347ENSSMAG00000003200smarca4a10094.711Scophthalmus_maximus
ENSMAMG00000009256smarca4a10082.554ENSSMAG00000014082-9684.912Scophthalmus_maximus
ENSMAMG00000009256smarca4a10090.049ENSSDUG00000017298smarca4a10091.209Seriola_dumerili
ENSMAMG00000009256smarca4a9986.687ENSSDUG00000005388-9687.284Seriola_dumerili
ENSMAMG00000009256smarca4a10096.835ENSSLDG00000024486smarca4a10096.835Seriola_lalandi_dorsalis
ENSMAMG00000009256smarca4a9487.861ENSSLDG00000023663-9788.278Seriola_lalandi_dorsalis
ENSMAMG00000009256smarca4a6396.894ENSSARG00000013477SMARCA48296.894Sorex_araneus
ENSMAMG00000009256smarca4a9584.429ENSSPUG00000004558SMARCA49884.067Sphenodon_punctatus
ENSMAMG00000009256smarca4a10095.983ENSSPAG00000004248smarca4a10095.983Stegastes_partitus
ENSMAMG00000009256smarca4a9888.494ENSSPAG00000012533-9686.787Stegastes_partitus
ENSMAMG00000009256smarca4a10087.424ENSSSCG00000013629SMARCA410087.242Sus_scrofa
ENSMAMG00000009256smarca4a5384.104ENSTGUG00000015488-9883.971Taeniopygia_guttata
ENSMAMG00000009256smarca4a9088.288ENSTRUG00000004885smarca4a10088.288Takifugu_rubripes
ENSMAMG00000009256smarca4a9583.460ENSTRUG00000001378SMARCA49884.160Takifugu_rubripes
ENSMAMG00000009256smarca4a7392.527ENSTNIG00000004859-10092.527Tetraodon_nigroviridis
ENSMAMG00000009256smarca4a10083.089ENSTNIG00000004536SMARCA49983.941Tetraodon_nigroviridis
ENSMAMG00000009256smarca4a10084.468ENSTTRG00000009519SMARCA410083.692Tursiops_truncatus
ENSMAMG00000009256smarca4a10087.219ENSUAMG00000014661SMARCA410087.279Ursus_americanus
ENSMAMG00000009256smarca4a9980.781ENSUMAG00000022005SMARCA49891.212Ursus_maritimus
ENSMAMG00000009256smarca4a10086.251ENSVVUG00000017820SMARCA49787.279Vulpes_vulpes
ENSMAMG00000009256smarca4a10082.953ENSXETG00000009355smarca49983.317Xenopus_tropicalis
ENSMAMG00000009256smarca4a9983.302ENSXCOG00000013494-9884.104Xiphophorus_couchianus
ENSMAMG00000009256smarca4a10091.900ENSXMAG00000006321smarca4a10092.448Xiphophorus_maculatus
ENSMAMG00000009256smarca4a10084.819ENSXMAG00000007030-9688.517Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us