EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000009294 (Gene tree)
Gene ID: 113130725
Gene Symbol: snrpb
Alias: zgc:77315
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 4053 bases
Position: chrOOHQ01000082.1:81143-85195
Accession: ZDB-GENE-040426-1819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000013700	LSM	PF01423.22	7.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000014077	-	2144	-	ENSMAMP00000013700	246 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000009294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000009294's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000009294	snrpb	67	94.611	ENSG00000125835	SNRPB	73	98.039	Homo_sapiens
ENSMAMG00000009294	snrpb	97	100.000	ENSAPOG00000019606	snrpb	81	100.000	Acanthochromis_polyacanthus
ENSMAMG00000009294	snrpb	69	92.982	ENSAMEG00000011353	SNRPB	76	91.304	Ailuropoda_melanoleuca
ENSMAMG00000009294	snrpb	90	100.000	ENSACIG00000014480	snrpb	99	100.000	Amphilophus_citrinellus
ENSMAMG00000009294	snrpb	97	99.582	ENSAOCG00000006876	snrpb	99	99.582	Amphiprion_ocellaris
ENSMAMG00000009294	snrpb	97	99.582	ENSAPEG00000021585	snrpb	99	99.582	Amphiprion_percula
ENSMAMG00000009294	snrpb	97	99.163	ENSATEG00000009836	snrpb	99	99.163	Anabas_testudineus
ENSMAMG00000009294	snrpb	64	95.625	ENSACAG00000002053	SNRPB	75	93.064	Anolis_carolinensis
ENSMAMG00000009294	snrpb	67	94.611	ENSANAG00000024443	-	78	92.778	Aotus_nancymaae
ENSMAMG00000009294	snrpb	67	87.425	ENSANAG00000036271	-	73	85.000	Aotus_nancymaae
ENSMAMG00000009294	snrpb	97	100.000	ENSACLG00000014707	snrpb	99	100.000	Astatotilapia_calliptera
ENSMAMG00000009294	snrpb	96	97.890	ENSAMXG00000029434	snrpb	99	97.890	Astyanax_mexicanus
ENSMAMG00000009294	snrpb	82	85.990	ENSBTAG00000001038	SNRPB	78	92.778	Bos_taurus
ENSMAMG00000009294	snrpb	67	94.611	ENSCJAG00000020971	-	78	92.778	Callithrix_jacchus
ENSMAMG00000009294	snrpb	86	84.186	ENSCJAG00000023097	-	75	85.000	Callithrix_jacchus
ENSMAMG00000009294	snrpb	67	94.611	ENSCAFG00000006693	-	78	92.778	Canis_familiaris
ENSMAMG00000009294	snrpb	59	83.673	ENSCAFG00000031109	-	76	80.328	Canis_familiaris
ENSMAMG00000009294	snrpb	67	94.611	ENSCAFG00020016981	-	75	92.778	Canis_lupus_dingo
ENSMAMG00000009294	snrpb	67	94.611	ENSCHIG00000025449	-	78	92.778	Capra_hircus
ENSMAMG00000009294	snrpb	93	67.532	ENSTSYG00000032303	-	65	72.472	Carlito_syrichta
ENSMAMG00000009294	snrpb	69	92.982	ENSTSYG00000014498	-	78	92.778	Carlito_syrichta
ENSMAMG00000009294	snrpb	67	94.643	ENSCAPG00000012669	SNRPB	78	92.778	Cavia_aperea
ENSMAMG00000009294	snrpb	67	94.611	ENSCPOG00000039408	SNRPB	78	92.778	Cavia_porcellus
ENSMAMG00000009294	snrpb	52	83.465	ENSCCAG00000035140	-	89	84.314	Cebus_capucinus
ENSMAMG00000009294	snrpb	67	94.611	ENSCCAG00000026002	SNRPB	78	92.778	Cebus_capucinus
ENSMAMG00000009294	snrpb	67	94.611	ENSCATG00000030230	SNRPB	78	92.778	Cercocebus_atys
ENSMAMG00000009294	snrpb	67	94.611	ENSCLAG00000012442	SNRPB	76	92.778	Chinchilla_lanigera
ENSMAMG00000009294	snrpb	67	94.611	ENSCSAG00000010840	SNRPB	78	92.778	Chlorocebus_sabaeus
ENSMAMG00000009294	snrpb	67	96.407	ENSCPBG00000026801	SNRPB	78	93.889	Chrysemys_picta_bellii
ENSMAMG00000009294	snrpb	67	94.611	ENSCANG00000019461	SNRPB	78	92.778	Colobus_angolensis_palliatus
ENSMAMG00000009294	snrpb	67	94.611	ENSCGRG00001023046	Snrpb	78	92.778	Cricetulus_griseus_chok1gshd
ENSMAMG00000009294	snrpb	65	94.479	ENSCGRG00000010423	Snrpb	77	92.486	Cricetulus_griseus_crigri
ENSMAMG00000009294	snrpb	97	98.326	ENSCSEG00000020328	snrpb	99	98.326	Cynoglossus_semilaevis
ENSMAMG00000009294	snrpb	97	97.083	ENSDARG00000011125	snrpb	99	97.083	Danio_rerio
ENSMAMG00000009294	snrpb	67	94.611	ENSDNOG00000015545	-	75	92.778	Dasypus_novemcinctus
ENSMAMG00000009294	snrpb	69	87.719	ENSDNOG00000007896	-	76	85.326	Dasypus_novemcinctus
ENSMAMG00000009294	snrpb	65	94.444	ENSDORG00000029558	Snrpb	76	92.571	Dipodomys_ordii
ENSMAMG00000009294	snrpb	74	62.245	FBgn0262601	SmB	73	68.919	Drosophila_melanogaster
ENSMAMG00000009294	snrpb	67	73.653	ENSETEG00000006830	SNRPB	79	72.222	Echinops_telfairi
ENSMAMG00000009294	snrpb	74	79.121	ENSEBUG00000007467	SNRPB	62	87.838	Eptatretus_burgeri
ENSMAMG00000009294	snrpb	67	94.012	ENSEASG00005012991	SNRPB	78	92.222	Equus_asinus_asinus
ENSMAMG00000009294	snrpb	67	94.611	ENSECAG00000011944	SNRPB	78	92.778	Equus_caballus
ENSMAMG00000009294	snrpb	67	94.611	ENSEEUG00000015568	SNRPB	63	92.778	Erinaceus_europaeus
ENSMAMG00000009294	snrpb	96	97.881	ENSELUG00000014564	snrpb	99	97.881	Esox_lucius
ENSMAMG00000009294	snrpb	67	94.611	ENSFCAG00000034090	-	78	92.778	Felis_catus
ENSMAMG00000009294	snrpb	64	96.250	ENSFALG00000004866	SNRPB	73	94.083	Ficedula_albicollis
ENSMAMG00000009294	snrpb	67	94.611	ENSFDAG00000009937	SNRPB	78	92.778	Fukomys_damarensis
ENSMAMG00000009294	snrpb	67	96.407	ENSGALG00000035421	SNRPN	73	94.318	Gallus_gallus
ENSMAMG00000009294	snrpb	93	97.807	ENSGAFG00000019558	snrpb	99	97.807	Gambusia_affinis
ENSMAMG00000009294	snrpb	97	98.326	ENSGACG00000003262	snrpb	99	98.326	Gasterosteus_aculeatus
ENSMAMG00000009294	snrpb	67	96.407	ENSGAGG00000001308	SNRPB	75	93.889	Gopherus_agassizii
ENSMAMG00000009294	snrpb	67	94.611	ENSGGOG00000016138	SNRPB	78	92.778	Gorilla_gorilla
ENSMAMG00000009294	snrpb	97	100.000	ENSHBUG00000008369	snrpb	99	100.000	Haplochromis_burtoni
ENSMAMG00000009294	snrpb	60	86.486	ENSHGLG00000016505	-	83	82.081	Heterocephalus_glaber_female
ENSMAMG00000009294	snrpb	67	94.611	ENSHGLG00000016241	-	78	92.778	Heterocephalus_glaber_female
ENSMAMG00000009294	snrpb	67	94.611	ENSHGLG00100012877	-	78	92.778	Heterocephalus_glaber_male
ENSMAMG00000009294	snrpb	60	86.486	ENSHGLG00100004178	-	83	82.081	Heterocephalus_glaber_male
ENSMAMG00000009294	snrpb	97	98.745	ENSHCOG00000014888	snrpb	99	98.745	Hippocampus_comes
ENSMAMG00000009294	snrpb	96	97.468	ENSIPUG00000024569	SNRPB	99	97.468	Ictalurus_punctatus
ENSMAMG00000009294	snrpb	67	92.814	ENSSTOG00000033664	-	75	91.111	Ictidomys_tridecemlineatus
ENSMAMG00000009294	snrpb	67	94.611	ENSJJAG00000024170	Snrpb	78	92.778	Jaculus_jaculus
ENSMAMG00000009294	snrpb	92	98.678	ENSKMAG00000014494	snrpb	93	98.678	Kryptolebias_marmoratus
ENSMAMG00000009294	snrpb	97	99.163	ENSLBEG00000005678	snrpb	99	99.163	Labrus_bergylta
ENSMAMG00000009294	snrpb	73	94.505	ENSLACG00000011459	SNRPB	75	93.889	Latimeria_chalumnae
ENSMAMG00000009294	snrpb	96	97.890	ENSLOCG00000002687	snrpb	99	97.890	Lepisosteus_oculatus
ENSMAMG00000009294	snrpb	67	90.476	ENSLAFG00000017588	SNRPB	78	88.950	Loxodonta_africana
ENSMAMG00000009294	snrpb	67	94.611	ENSMFAG00000038756	SNRPB	78	92.778	Macaca_fascicularis
ENSMAMG00000009294	snrpb	67	94.611	ENSMMUG00000010050	SNRPB	78	92.778	Macaca_mulatta
ENSMAMG00000009294	snrpb	67	94.611	ENSMNEG00000027954	SNRPB	78	92.778	Macaca_nemestrina
ENSMAMG00000009294	snrpb	67	94.611	ENSMLEG00000022346	SNRPB	78	92.778	Mandrillus_leucophaeus
ENSMAMG00000009294	snrpb	97	100.000	ENSMZEG00005011856	snrpb	99	100.000	Maylandia_zebra
ENSMAMG00000009294	snrpb	67	94.611	ENSMICG00000016519	SNRPB	78	92.778	Microcebus_murinus
ENSMAMG00000009294	snrpb	72	83.889	ENSMICG00000015983	-	83	82.222	Microcebus_murinus
ENSMAMG00000009294	snrpb	67	94.012	ENSMOCG00000002892	-	78	92.222	Microtus_ochrogaster
ENSMAMG00000009294	snrpb	56	78.261	ENSMOCG00000021362	-	75	74.719	Microtus_ochrogaster
ENSMAMG00000009294	snrpb	93	98.690	ENSMMOG00000013226	snrpb	97	98.690	Mola_mola
ENSMAMG00000009294	snrpb	98	98.347	ENSMALG00000020839	snrpb	82	98.347	Monopterus_albus
ENSMAMG00000009294	snrpb	67	94.611	MGP_CAROLIEiJ_G0024293	Snrpb	73	98.039	Mus_caroli
ENSMAMG00000009294	snrpb	67	94.611	ENSMUSG00000027404	Snrpb	73	98.039	Mus_musculus
ENSMAMG00000009294	snrpb	67	94.611	MGP_PahariEiJ_G0025738	Snrpb	73	98.039	Mus_pahari
ENSMAMG00000009294	snrpb	67	94.611	MGP_SPRETEiJ_G0025213	Snrpb	78	92.778	Mus_spretus
ENSMAMG00000009294	snrpb	67	94.611	ENSMPUG00000009283	SNRPB	78	92.778	Mustela_putorius_furo
ENSMAMG00000009294	snrpb	67	91.018	ENSMLUG00000016951	SNRPB	74	89.444	Myotis_lucifugus
ENSMAMG00000009294	snrpb	67	94.611	ENSNGAG00000012051	Snrpb	78	92.778	Nannospalax_galili
ENSMAMG00000009294	snrpb	91	99.107	ENSNBRG00000006353	snrpb	86	99.107	Neolamprologus_brichardi
ENSMAMG00000009294	snrpb	67	94.611	ENSNLEG00000029067	SNRPB	76	92.265	Nomascus_leucogenys
ENSMAMG00000009294	snrpb	67	94.611	ENSMEUG00000015625	SNRPB	80	92.778	Notamacropus_eugenii
ENSMAMG00000009294	snrpb	67	89.222	ENSODEG00000016060	-	75	87.778	Octodon_degus
ENSMAMG00000009294	snrpb	67	94.611	ENSODEG00000004305	-	78	92.778	Octodon_degus
ENSMAMG00000009294	snrpb	97	100.000	ENSONIG00000000248	snrpb	99	100.000	Oreochromis_niloticus
ENSMAMG00000009294	snrpb	87	64.815	ENSOCUG00000026813	-	78	63.333	Oryctolagus_cuniculus
ENSMAMG00000009294	snrpb	71	88.764	ENSOCUG00000022423	-	87	88.824	Oryctolagus_cuniculus
ENSMAMG00000009294	snrpb	67	92.216	ENSOCUG00000028215	-	75	90.556	Oryctolagus_cuniculus
ENSMAMG00000009294	snrpb	87	87.500	ENSOCUG00000021456	-	75	88.889	Oryctolagus_cuniculus
ENSMAMG00000009294	snrpb	67	94.611	ENSOCUG00000014042	-	75	92.778	Oryctolagus_cuniculus
ENSMAMG00000009294	snrpb	97	99.163	ENSORLG00000021862	snrpb	99	99.163	Oryzias_latipes
ENSMAMG00000009294	snrpb	67	94.611	ENSOGAG00000016149	SNRPB	75	92.778	Otolemur_garnettii
ENSMAMG00000009294	snrpb	67	94.611	ENSOARG00000006740	SNRPB	78	92.778	Ovis_aries
ENSMAMG00000009294	snrpb	67	94.611	ENSPPAG00000036314	SNRPB	78	92.778	Pan_paniscus
ENSMAMG00000009294	snrpb	67	94.611	ENSPPRG00000003233	-	78	92.778	Panthera_pardus
ENSMAMG00000009294	snrpb	67	94.611	ENSPTIG00000007468	SNRPB	78	92.778	Panthera_tigris_altaica
ENSMAMG00000009294	snrpb	67	94.611	ENSPTRG00000013176	SNRPB	78	92.778	Pan_troglodytes
ENSMAMG00000009294	snrpb	67	94.611	ENSPANG00000020362	SNRPB	75	92.778	Papio_anubis
ENSMAMG00000009294	snrpb	96	96.624	ENSPKIG00000002865	snrpb	99	96.624	Paramormyrops_kingsleyae
ENSMAMG00000009294	snrpb	68	95.858	ENSPSIG00000014125	SNRPB	75	93.407	Pelodiscus_sinensis
ENSMAMG00000009294	snrpb	71	97.714	ENSPMGG00000016349	snrpb	74	97.688	Periophthalmus_magnuspinnatus
ENSMAMG00000009294	snrpb	67	94.611	ENSPEMG00000007948	Snrpb	78	92.778	Peromyscus_maniculatus_bairdii
ENSMAMG00000009294	snrpb	67	93.452	ENSPCIG00000004694	SNRPB	76	91.209	Phascolarctos_cinereus
ENSMAMG00000009294	snrpb	61	100.000	ENSPFOG00000011802	snrpb	64	100.000	Poecilia_formosa
ENSMAMG00000009294	snrpb	87	81.364	ENSPLAG00000014130	snrpb	59	100.000	Poecilia_latipinna
ENSMAMG00000009294	snrpb	87	80.841	ENSPREG00000015515	snrpb	62	100.000	Poecilia_reticulata
ENSMAMG00000009294	snrpb	67	94.611	ENSPPYG00000010841	SNRPB	78	92.778	Pongo_abelii
ENSMAMG00000009294	snrpb	67	94.611	ENSPCOG00000013686	SNRPB	78	92.778	Propithecus_coquereli
ENSMAMG00000009294	snrpb	67	93.413	ENSPVAG00000017013	SNRPB	63	91.667	Pteropus_vampyrus
ENSMAMG00000009294	snrpb	97	100.000	ENSPNYG00000014788	snrpb	99	100.000	Pundamilia_nyererei
ENSMAMG00000009294	snrpb	96	97.468	ENSPNAG00000016126	snrpb	99	97.468	Pygocentrus_nattereri
ENSMAMG00000009294	snrpb	67	94.611	ENSRNOG00000006961	Snrpb	78	92.778	Rattus_norvegicus
ENSMAMG00000009294	snrpb	67	94.611	ENSRBIG00000040505	SNRPB	78	93.296	Rhinopithecus_bieti
ENSMAMG00000009294	snrpb	67	94.611	ENSRROG00000036094	SNRPB	78	92.778	Rhinopithecus_roxellana
ENSMAMG00000009294	snrpb	67	94.611	ENSSBOG00000027310	SNRPB	78	92.778	Saimiri_boliviensis_boliviensis
ENSMAMG00000009294	snrpb	67	95.210	ENSSHAG00000010394	SNRPB	75	93.333	Sarcophilus_harrisii
ENSMAMG00000009294	snrpb	96	96.203	ENSSFOG00015002870	snrpb	99	96.203	Scleropages_formosus
ENSMAMG00000009294	snrpb	97	98.745	ENSSMAG00000006766	snrpb	99	98.745	Scophthalmus_maximus
ENSMAMG00000009294	snrpb	97	100.000	ENSSDUG00000018539	snrpb	99	100.000	Seriola_dumerili
ENSMAMG00000009294	snrpb	97	100.000	ENSSLDG00000022391	snrpb	99	100.000	Seriola_lalandi_dorsalis
ENSMAMG00000009294	snrpb	67	79.042	ENSSARG00000003084	SNRPB	77	78.333	Sorex_araneus
ENSMAMG00000009294	snrpb	67	96.407	ENSSPUG00000015659	SNRPB	75	93.889	Sphenodon_punctatus
ENSMAMG00000009294	snrpb	97	100.000	ENSSPAG00000021992	snrpb	99	100.000	Stegastes_partitus
ENSMAMG00000009294	snrpb	73	72.527	ENSSSCG00000011966	-	75	69.444	Sus_scrofa
ENSMAMG00000009294	snrpb	67	94.611	ENSSSCG00000040857	-	78	92.778	Sus_scrofa
ENSMAMG00000009294	snrpb	68	83.529	ENSTGUG00000005684	SNRPB	59	97.143	Taeniopygia_guttata
ENSMAMG00000009294	snrpb	92	98.678	ENSTRUG00000023094	snrpb	98	98.678	Takifugu_rubripes
ENSMAMG00000009294	snrpb	97	98.745	ENSTNIG00000002991	snrpb	99	98.745	Tetraodon_nigroviridis
ENSMAMG00000009294	snrpb	67	94.611	ENSUAMG00000005984	-	86	91.667	Ursus_americanus
ENSMAMG00000009294	snrpb	77	76.190	ENSUMAG00000002123	-	63	94.891	Ursus_maritimus
ENSMAMG00000009294	snrpb	67	94.012	ENSVVUG00000025654	-	75	92.222	Vulpes_vulpes
ENSMAMG00000009294	snrpb	93	72.103	ENSVVUG00000010086	-	95	63.063	Vulpes_vulpes
ENSMAMG00000009294	snrpb	61	97.987	ENSXETG00000027266	snrpb	76	92.778	Xenopus_tropicalis
ENSMAMG00000009294	snrpb	87	67.742	ENSXMAG00000028767	snrpb	58	100.000	Xiphophorus_maculatus