EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000009328 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: si:ch211-153b23.3
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 3502 bases
Position: chrOOHQ01000077.1:15090408-15093909
Accession: ZDB-GENE-141216-408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000013780	Sua5_yciO_yrdC	PF01300.18	2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000014158	-	2634	-	ENSMAMP00000013780	878 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000009328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000009328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000009328	si:ch211-153b23.3	58	31.619	ENSMAMG00000009277	si:ch211-153b23.4	62	31.619
ENSMAMG00000009328	si:ch211-153b23.3	58	31.358	ENSMAMG00000009358	si:ch211-153b23.4	63	31.358

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000009328	si:ch211-153b23.3	58	32.319	ENSACIG00000006997	si:ch211-153b23.4	60	32.319	Amphilophus_citrinellus
ENSMAMG00000009328	si:ch211-153b23.3	100	74.120	ENSACIG00000006968	si:ch211-153b23.3	100	74.120	Amphilophus_citrinellus
ENSMAMG00000009328	si:ch211-153b23.3	100	84.371	ENSAOCG00000010974	si:ch211-153b23.3	100	84.258	Amphiprion_ocellaris
ENSMAMG00000009328	si:ch211-153b23.3	100	84.485	ENSAPEG00000014700	si:ch211-153b23.3	100	84.371	Amphiprion_percula
ENSMAMG00000009328	si:ch211-153b23.3	100	85.261	ENSATEG00000004956	si:ch211-153b23.3	99	85.261	Anabas_testudineus
ENSMAMG00000009328	si:ch211-153b23.3	58	32.319	ENSACLG00000005471	si:ch211-153b23.4	58	32.319	Astatotilapia_calliptera
ENSMAMG00000009328	si:ch211-153b23.3	100	79.728	ENSACLG00000005894	si:ch211-153b23.3	100	79.728	Astatotilapia_calliptera
ENSMAMG00000009328	si:ch211-153b23.3	100	71.348	ENSAMXG00000038564	si:ch211-153b23.3	99	71.850	Astyanax_mexicanus
ENSMAMG00000009328	si:ch211-153b23.3	58	32.246	ENSAMXG00000013879	si:ch211-153b23.4	61	32.246	Astyanax_mexicanus
ENSMAMG00000009328	si:ch211-153b23.3	99	78.385	ENSCSEG00000014853	si:ch211-153b23.3	100	78.385	Cynoglossus_semilaevis
ENSMAMG00000009328	si:ch211-153b23.3	58	32.510	ENSCVAG00000021145	si:ch211-153b23.4	64	32.510	Cyprinodon_variegatus
ENSMAMG00000009328	si:ch211-153b23.3	100	81.612	ENSCVAG00000021124	si:ch211-153b23.3	100	81.612	Cyprinodon_variegatus
ENSMAMG00000009328	si:ch211-153b23.3	58	31.369	ENSDARG00000077169	si:ch211-153b23.4	59	31.429	Danio_rerio
ENSMAMG00000009328	si:ch211-153b23.3	100	71.445	ENSDARG00000104919	si:ch211-153b23.3	99	71.445	Danio_rerio
ENSMAMG00000009328	si:ch211-153b23.3	85	84.404	ENSELUG00000004912	si:ch211-153b23.3	99	84.404	Esox_lucius
ENSMAMG00000009328	si:ch211-153b23.3	100	82.066	ENSFHEG00000010030	si:ch211-153b23.3	99	82.066	Fundulus_heteroclitus
ENSMAMG00000009328	si:ch211-153b23.3	100	81.519	ENSGAFG00000007455	si:ch211-153b23.3	99	81.519	Gambusia_affinis
ENSMAMG00000009328	si:ch211-153b23.3	58	31.810	ENSGACG00000018253	si:ch211-153b23.4	60	31.810	Gasterosteus_aculeatus
ENSMAMG00000009328	si:ch211-153b23.3	55	31.653	ENSHBUG00000000013	si:ch211-153b23.4	64	31.653	Haplochromis_burtoni
ENSMAMG00000009328	si:ch211-153b23.3	100	80.068	ENSHBUG00000001760	si:ch211-153b23.3	100	80.068	Haplochromis_burtoni
ENSMAMG00000009328	si:ch211-153b23.3	100	72.222	ENSIPUG00000015213	si:ch211-153b23.3	99	72.449	Ictalurus_punctatus
ENSMAMG00000009328	si:ch211-153b23.3	99	81.342	ENSKMAG00000006792	si:ch211-153b23.3	99	81.342	Kryptolebias_marmoratus
ENSMAMG00000009328	si:ch211-153b23.3	58	30.916	ENSKMAG00000006829	si:ch211-153b23.4	63	30.916	Kryptolebias_marmoratus
ENSMAMG00000009328	si:ch211-153b23.3	58	30.989	ENSKMAG00000006919	-	59	30.989	Kryptolebias_marmoratus
ENSMAMG00000009328	si:ch211-153b23.3	100	81.839	ENSLBEG00000026324	si:ch211-153b23.3	99	81.839	Labrus_bergylta
ENSMAMG00000009328	si:ch211-153b23.3	94	56.434	ENSLACG00000005800	-	99	56.450	Latimeria_chalumnae
ENSMAMG00000009328	si:ch211-153b23.3	84	56.000	ENSLOCG00000015063	si:ch211-153b23.3	98	56.000	Lepisosteus_oculatus
ENSMAMG00000009328	si:ch211-153b23.3	100	79.841	ENSMZEG00005011450	si:ch211-153b23.3	100	79.841	Maylandia_zebra
ENSMAMG00000009328	si:ch211-153b23.3	58	32.129	ENSMZEG00005011433	si:ch211-153b23.4	63	32.129	Maylandia_zebra
ENSMAMG00000009328	si:ch211-153b23.3	100	81.900	ENSMMOG00000004436	si:ch211-153b23.3	99	81.900	Mola_mola
ENSMAMG00000009328	si:ch211-153b23.3	58	31.939	ENSNBRG00000013392	si:ch211-153b23.4	65	31.939	Neolamprologus_brichardi
ENSMAMG00000009328	si:ch211-153b23.3	100	80.068	ENSNBRG00000013370	si:ch211-153b23.3	100	80.068	Neolamprologus_brichardi
ENSMAMG00000009328	si:ch211-153b23.3	58	32.129	ENSONIG00000017875	si:ch211-153b23.4	59	32.129	Oreochromis_niloticus
ENSMAMG00000009328	si:ch211-153b23.3	100	77.217	ENSORLG00000006161	si:ch211-153b23.3	99	77.217	Oryzias_latipes
ENSMAMG00000009328	si:ch211-153b23.3	58	32.827	ENSORLG00000006169	si:ch211-153b23.4	59	32.827	Oryzias_latipes
ENSMAMG00000009328	si:ch211-153b23.3	58	32.827	ENSORLG00020009905	si:ch211-153b23.4	59	32.827	Oryzias_latipes_hni
ENSMAMG00000009328	si:ch211-153b23.3	97	78.322	ENSORLG00020000910	si:ch211-153b23.3	100	78.322	Oryzias_latipes_hni
ENSMAMG00000009328	si:ch211-153b23.3	58	33.207	ENSORLG00015003709	si:ch211-153b23.4	59	33.207	Oryzias_latipes_hsok
ENSMAMG00000009328	si:ch211-153b23.3	97	77.558	ENSORLG00015003698	si:ch211-153b23.3	100	77.558	Oryzias_latipes_hsok
ENSMAMG00000009328	si:ch211-153b23.3	60	31.239	ENSOMEG00000007682	si:ch211-153b23.4	62	31.239	Oryzias_melastigma
ENSMAMG00000009328	si:ch211-153b23.3	100	78.788	ENSOMEG00000007661	si:ch211-153b23.3	99	78.788	Oryzias_melastigma
ENSMAMG00000009328	si:ch211-153b23.3	99	51.384	ENSPKIG00000021029	-	99	51.163	Paramormyrops_kingsleyae
ENSMAMG00000009328	si:ch211-153b23.3	56	32.955	ENSPKIG00000014429	si:ch211-153b23.4	62	32.955	Paramormyrops_kingsleyae
ENSMAMG00000009328	si:ch211-153b23.3	97	71.147	ENSPKIG00000022450	si:ch211-153b23.3	100	71.147	Paramormyrops_kingsleyae
ENSMAMG00000009328	si:ch211-153b23.3	85	77.551	ENSPMGG00000001311	si:ch211-153b23.3	100	77.551	Periophthalmus_magnuspinnatus
ENSMAMG00000009328	si:ch211-153b23.3	58	32.096	ENSPFOG00000012164	si:ch211-153b23.4	73	32.096	Poecilia_formosa
ENSMAMG00000009328	si:ch211-153b23.3	100	81.890	ENSPFOG00000012289	si:ch211-153b23.3	99	81.890	Poecilia_formosa
ENSMAMG00000009328	si:ch211-153b23.3	58	32.258	ENSPLAG00000016295	si:ch211-153b23.4	64	32.258	Poecilia_latipinna
ENSMAMG00000009328	si:ch211-153b23.3	99	82.386	ENSPLAG00000016320	si:ch211-153b23.3	100	82.386	Poecilia_latipinna
ENSMAMG00000009328	si:ch211-153b23.3	100	82.653	ENSPMEG00000008884	si:ch211-153b23.3	99	82.653	Poecilia_mexicana
ENSMAMG00000009328	si:ch211-153b23.3	58	31.731	ENSPMEG00000007538	si:ch211-153b23.4	63	31.731	Poecilia_mexicana
ENSMAMG00000009328	si:ch211-153b23.3	100	79.841	ENSPNYG00000000251	si:ch211-153b23.3	100	79.841	Pundamilia_nyererei
ENSMAMG00000009328	si:ch211-153b23.3	58	32.129	ENSPNYG00000000250	si:ch211-153b23.4	63	32.129	Pundamilia_nyererei
ENSMAMG00000009328	si:ch211-153b23.3	100	73.386	ENSPNAG00000019592	si:ch211-153b23.3	99	73.386	Pygocentrus_nattereri
ENSMAMG00000009328	si:ch211-153b23.3	100	71.557	ENSSFOG00015010910	si:ch211-153b23.3	99	71.557	Scleropages_formosus
ENSMAMG00000009328	si:ch211-153b23.3	68	51.204	ENSSFOG00015009030	-	96	51.204	Scleropages_formosus
ENSMAMG00000009328	si:ch211-153b23.3	99	83.599	ENSSMAG00000005446	si:ch211-153b23.3	100	83.599	Scophthalmus_maximus
ENSMAMG00000009328	si:ch211-153b23.3	58	31.429	ENSSDUG00000006671	si:ch211-153b23.4	63	31.429	Seriola_dumerili
ENSMAMG00000009328	si:ch211-153b23.3	100	83.465	ENSSLDG00000008629	si:ch211-153b23.3	100	83.465	Seriola_lalandi_dorsalis
ENSMAMG00000009328	si:ch211-153b23.3	56	30.916	ENSTGUG00000005499	-	63	30.975	Taeniopygia_guttata
ENSMAMG00000009328	si:ch211-153b23.3	57	31.579	ENSTRUG00000003247	si:ch211-153b23.4	62	31.579	Takifugu_rubripes
ENSMAMG00000009328	si:ch211-153b23.3	99	78.375	ENSTRUG00000020530	si:ch211-153b23.3	100	78.375	Takifugu_rubripes
ENSMAMG00000009328	si:ch211-153b23.3	100	64.838	ENSTNIG00000008962	si:ch211-153b23.3	99	82.331	Tetraodon_nigroviridis
ENSMAMG00000009328	si:ch211-153b23.3	58	32.061	ENSXMAG00000021388	si:ch211-153b23.4	62	32.252	Xiphophorus_maculatus
ENSMAMG00000009328	si:ch211-153b23.3	100	81.973	ENSXMAG00000029318	si:ch211-153b23.3	99	81.973	Xiphophorus_maculatus