EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000009344 (Gene tree)
Gene ID: 113143549
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin 1a
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 7320 bases
Position: chrOOHQ01000002.1:8175864-8183183
Accession: ZDB-GENE-021028-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000013775	Nucleoplasmin	PF03066.15	1.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000014153	-	3148	-	ENSMAMP00000013775	357 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000009344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000009344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000009344	npm1a	58	43.421	ENSMAMG00000015335	npm1b	97	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000009344	npm1a	83	74.086	ENSAPOG00000002813	npm1a	100	75.083	Acanthochromis_polyacanthus
ENSMAMG00000009344	npm1a	77	75.972	ENSACIG00000014201	npm1a	99	75.618	Amphilophus_citrinellus
ENSMAMG00000009344	npm1a	73	69.847	ENSAOCG00000004978	npm1a	99	68.321	Amphiprion_ocellaris
ENSMAMG00000009344	npm1a	83	76.846	ENSAPEG00000008594	npm1a	100	77.181	Amphiprion_percula
ENSMAMG00000009344	npm1a	83	77.346	ENSATEG00000008885	npm1a	99	78.033	Anabas_testudineus
ENSMAMG00000009344	npm1a	80	71.678	ENSACLG00000008376	npm1a	96	70.629	Astatotilapia_calliptera
ENSMAMG00000009344	npm1a	81	57.732	ENSAMXG00000010155	npm1a	98	59.310	Astyanax_mexicanus
ENSMAMG00000009344	npm1a	63	82.353	ENSCSEG00000011165	npm1a	96	84.314	Cynoglossus_semilaevis
ENSMAMG00000009344	npm1a	82	71.525	ENSCVAG00000008960	npm1a	100	71.237	Cyprinodon_variegatus
ENSMAMG00000009344	npm1a	81	64.138	ENSDARG00000014329	npm1a	96	71.795	Danio_rerio
ENSMAMG00000009344	npm1a	79	36.335	ENSEBUG00000012753	npm1a	91	36.223	Eptatretus_burgeri
ENSMAMG00000009344	npm1a	83	69.231	ENSELUG00000013705	npm1a	100	69.231	Esox_lucius
ENSMAMG00000009344	npm1a	83	71.053	ENSFHEG00000012496	npm1a	100	71.382	Fundulus_heteroclitus
ENSMAMG00000009344	npm1a	83	67.657	ENSGAFG00000013059	npm1a	100	67.657	Gambusia_affinis
ENSMAMG00000009344	npm1a	82	65.646	ENSGACG00000020319	npm1a	99	65.646	Gasterosteus_aculeatus
ENSMAMG00000009344	npm1a	82	73.885	ENSHBUG00000000776	npm1a	99	72.930	Haplochromis_burtoni
ENSMAMG00000009344	npm1a	83	58.553	ENSHCOG00000001059	npm1a	100	58.882	Hippocampus_comes
ENSMAMG00000009344	npm1a	81	61.953	ENSIPUG00000019452	npm1	99	62.290	Ictalurus_punctatus
ENSMAMG00000009344	npm1a	82	75.510	ENSKMAG00000010709	npm1a	100	74.832	Kryptolebias_marmoratus
ENSMAMG00000009344	npm1a	83	73.913	ENSLBEG00000008793	npm1a	100	74.916	Labrus_bergylta
ENSMAMG00000009344	npm1a	70	59.559	ENSLOCG00000009683	npm1a	100	59.559	Lepisosteus_oculatus
ENSMAMG00000009344	npm1a	82	73.718	ENSMZEG00005013717	npm1a	99	74.038	Maylandia_zebra
ENSMAMG00000009344	npm1a	78	74.468	ENSMMOG00000007980	npm1a	100	74.468	Mola_mola
ENSMAMG00000009344	npm1a	83	77.333	ENSMALG00000001146	npm1a	100	79.333	Monopterus_albus
ENSMAMG00000009344	npm1a	82	70.347	ENSNBRG00000013172	npm1a	99	70.476	Neolamprologus_brichardi
ENSMAMG00000009344	npm1a	82	70.199	ENSONIG00000001860	npm1a	99	71.569	Oreochromis_niloticus
ENSMAMG00000009344	npm1a	83	76.689	ENSORLG00000010179	npm1a	100	77.365	Oryzias_latipes
ENSMAMG00000009344	npm1a	83	73.311	ENSORLG00020020817	npm1a	100	73.986	Oryzias_latipes_hni
ENSMAMG00000009344	npm1a	83	76.351	ENSORLG00015003439	npm1a	100	77.027	Oryzias_latipes_hsok
ENSMAMG00000009344	npm1a	83	73.311	ENSOMEG00000007083	npm1a	100	73.649	Oryzias_melastigma
ENSMAMG00000009344	npm1a	83	56.436	ENSPKIG00000023943	npm1a	100	56.436	Paramormyrops_kingsleyae
ENSMAMG00000009344	npm1a	83	59.060	ENSPMGG00000011716	npm1a	100	59.797	Periophthalmus_magnuspinnatus
ENSMAMG00000009344	npm1a	83	67.657	ENSPFOG00000019173	npm1a	100	67.657	Poecilia_formosa
ENSMAMG00000009344	npm1a	83	66.230	ENSPLAG00000001093	npm1a	100	66.230	Poecilia_latipinna
ENSMAMG00000009344	npm1a	83	67.657	ENSPMEG00000012523	npm1a	100	67.657	Poecilia_mexicana
ENSMAMG00000009344	npm1a	82	69.360	ENSPREG00000001647	npm1a	100	69.103	Poecilia_reticulata
ENSMAMG00000009344	npm1a	82	76.375	ENSPNYG00000019321	npm1a	99	76.699	Pundamilia_nyererei
ENSMAMG00000009344	npm1a	81	61.486	ENSPNAG00000026891	npm1a	99	62.838	Pygocentrus_nattereri
ENSMAMG00000009344	npm1a	83	62.000	ENSSFOG00015007074	npm1a	100	63.000	Scleropages_formosus
ENSMAMG00000009344	npm1a	83	76.254	ENSSMAG00000019090	npm1a	100	77.258	Scophthalmus_maximus
ENSMAMG00000009344	npm1a	83	79.530	ENSSDUG00000015609	npm1a	100	79.530	Seriola_dumerili
ENSMAMG00000009344	npm1a	83	78.523	ENSSLDG00000017849	npm1a	100	79.530	Seriola_lalandi_dorsalis
ENSMAMG00000009344	npm1a	83	56.949	ENSSPAG00000021660	npm1a	94	55.326	Stegastes_partitus
ENSMAMG00000009344	npm1a	83	76.568	ENSTRUG00000024003	npm1a	100	77.228	Takifugu_rubripes
ENSMAMG00000009344	npm1a	83	72.483	ENSTNIG00000010773	npm1a	100	72.819	Tetraodon_nigroviridis
ENSMAMG00000009344	npm1a	82	63.514	ENSXCOG00000005958	npm1a	99	66.316	Xiphophorus_couchianus
ENSMAMG00000009344	npm1a	83	68.852	ENSXMAG00000000396	npm1a	100	69.180	Xiphophorus_maculatus