EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000009768 (Gene tree)
Gene ID: 113122028
Gene Symbol: ovol1a
Alias: ovol1|sb:cb956|zgc:171804
Full Name: putative transcription factor Ovo-like 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 8279 bases
Position: chrOOHQ01000107.1:8018500-8026778
Accession: 113122028
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000014377	zf-C2H2	PF00096.26	4.2e-14	1	2
ENSMAMP00000014377	zf-C2H2	PF00096.26	4.2e-14	2	2
ENSMAMP00000014377	zf-met	PF12874.7	0.0005	1	2
ENSMAMP00000014377	zf-met	PF12874.7	0.0005	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000014778	-	2675	-	ENSMAMP00000014377	345 (aa)	XP_026148716	UPI000E4564A8

Gene Model

Click here to download ENSMAMG00000009768's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000009768's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000009768	ovol1a	72	41.975	ENSMAMG00000006312	-	91	36.364
ENSMAMG00000009768	ovol1a	53	30.588	ENSMAMG00000018536	-	55	30.588
ENSMAMG00000009768	ovol1a	58	44.872	ENSMAMG00000016119	-	80	44.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000009768	ovol1a	98	42.398	ENSAMXG00000041879	ovol1b	87	42.953	Astyanax_mexicanus
ENSMAMG00000009768	ovol1a	99	56.944	ENSAMXG00000011046	ovol1a	99	56.022	Astyanax_mexicanus
ENSMAMG00000009768	ovol1a	99	56.303	ENSDARG00000076472	ovol1a	100	55.742	Danio_rerio
ENSMAMG00000009768	ovol1a	96	47.198	ENSDARG00000078256	ovol1b	90	50.331	Danio_rerio
ENSMAMG00000009768	ovol1a	100	57.766	ENSELUG00000000343	ovol1a	99	57.609	Esox_lucius
ENSMAMG00000009768	ovol1a	100	73.164	ENSFHEG00000002773	-	100	72.034	Fundulus_heteroclitus
ENSMAMG00000009768	ovol1a	72	78.378	ENSGACG00000018794	ovol1a	76	77.830	Gasterosteus_aculeatus
ENSMAMG00000009768	ovol1a	100	69.741	ENSHCOG00000015860	ovol1a	100	69.075	Hippocampus_comes
ENSMAMG00000009768	ovol1a	100	74.063	ENSKMAG00000002605	-	100	74.352	Kryptolebias_marmoratus
ENSMAMG00000009768	ovol1a	100	83.862	ENSMALG00000008421	ovol1a	100	83.573	Monopterus_albus
ENSMAMG00000009768	ovol1a	100	55.747	ENSPKIG00000024718	ovol1a	100	55.747	Paramormyrops_kingsleyae
ENSMAMG00000009768	ovol1a	100	73.352	ENSPFOG00000008841	-	100	74.212	Poecilia_formosa
ENSMAMG00000009768	ovol1a	87	42.193	ENSPNAG00000016198	ovol1b	94	43.189	Pygocentrus_nattereri
ENSMAMG00000009768	ovol1a	100	57.182	ENSPNAG00000020630	ovol1a	100	55.153	Pygocentrus_nattereri
ENSMAMG00000009768	ovol1a	100	78.814	ENSSDUG00000009846	ovol1a	100	79.944	Seriola_dumerili
ENSMAMG00000009768	ovol1a	66	59.649	ENSXCOG00000006461	-	78	58.772	Xiphophorus_couchianus