EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000009793 (Gene tree)
Gene ID: 113130349
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 26435 bases
Position: chrOOHQ01000082.1:9210884-9237318
Accession: 113130349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000014464	R3H	PF01424.22	8.5e-11	1	1
ENSMAMP00000014424	R3H	PF01424.22	8.9e-11	1	1
ENSMAMP00000014448	R3H	PF01424.22	9.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000014870	-	5828	-	ENSMAMP00000014464	1043 (aa)	-	-
ENSMAMT00000014851	-	5873	-	ENSMAMP00000014448	1058 (aa)	-	-
ENSMAMT00000014825	-	5927	-	ENSMAMP00000014424	1076 (aa)	XP_026162679	UPI000E46511E

Gene Model

Click here to download ENSMAMG00000009793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000009793's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000009793	r3hdm2	83	55.764	ENSMAMG00000004532	r3hdm1	77	62.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000009793	r3hdm2	99	64.163	ENSG00000179912	R3HDM2	99	63.447	Homo_sapiens
ENSMAMG00000009793	r3hdm2	100	95.930	ENSAPOG00000020341	r3hdm2	100	95.930	Acanthochromis_polyacanthus
ENSMAMG00000009793	r3hdm2	95	66.699	ENSAMEG00000004812	R3HDM2	99	63.985	Ailuropoda_melanoleuca
ENSMAMG00000009793	r3hdm2	94	87.410	ENSACIG00000016146	r3hdm2	98	85.773	Amphilophus_citrinellus
ENSMAMG00000009793	r3hdm2	100	96.115	ENSAOCG00000023694	r3hdm2	100	96.115	Amphiprion_ocellaris
ENSMAMG00000009793	r3hdm2	100	95.955	ENSAPEG00000008851	r3hdm2	100	95.955	Amphiprion_percula
ENSMAMG00000009793	r3hdm2	100	93.524	ENSATEG00000025024	r3hdm2	100	92.292	Anabas_testudineus
ENSMAMG00000009793	r3hdm2	100	55.508	ENSAPLG00000004298	R3HDM2	99	59.386	Anas_platyrhynchos
ENSMAMG00000009793	r3hdm2	99	61.803	ENSACAG00000006388	R3HDM2	99	60.353	Anolis_carolinensis
ENSMAMG00000009793	r3hdm2	96	62.218	ENSANAG00000031310	-	98	59.942	Aotus_nancymaae
ENSMAMG00000009793	r3hdm2	99	64.068	ENSANAG00000025397	-	99	64.015	Aotus_nancymaae
ENSMAMG00000009793	r3hdm2	100	95.664	ENSACLG00000019106	r3hdm2	100	95.099	Astatotilapia_calliptera
ENSMAMG00000009793	r3hdm2	95	69.880	ENSAMXG00000017180	r3hdm2	99	71.386	Astyanax_mexicanus
ENSMAMG00000009793	r3hdm2	99	63.394	ENSBTAG00000018361	R3HDM2	99	63.223	Bos_taurus
ENSMAMG00000009793	r3hdm2	99	63.267	ENSCJAG00000007365	R3HDM2	99	63.516	Callithrix_jacchus
ENSMAMG00000009793	r3hdm2	95	65.179	ENSCAFG00000000215	R3HDM2	99	62.815	Canis_familiaris
ENSMAMG00000009793	r3hdm2	95	66.795	ENSCAFG00020023713	R3HDM2	99	65.381	Canis_lupus_dingo
ENSMAMG00000009793	r3hdm2	95	66.603	ENSCHIG00000014022	R3HDM2	99	65.381	Capra_hircus
ENSMAMG00000009793	r3hdm2	99	63.489	ENSTSYG00000001449	R3HDM2	99	63.093	Carlito_syrichta
ENSMAMG00000009793	r3hdm2	99	66.175	ENSCPOG00000009217	R3HDM2	99	64.857	Cavia_porcellus
ENSMAMG00000009793	r3hdm2	87	64.579	ENSCCAG00000026083	R3HDM2	99	64.425	Cebus_capucinus
ENSMAMG00000009793	r3hdm2	99	65.009	ENSCATG00000036929	R3HDM2	99	64.954	Cercocebus_atys
ENSMAMG00000009793	r3hdm2	99	65.530	ENSCLAG00000011997	R3HDM2	99	65.074	Chinchilla_lanigera
ENSMAMG00000009793	r3hdm2	99	65.424	ENSCSAG00000004911	R3HDM2	99	65.084	Chlorocebus_sabaeus
ENSMAMG00000009793	r3hdm2	73	66.135	ENSCHOG00000005636	R3HDM2	89	67.396	Choloepus_hoffmanni
ENSMAMG00000009793	r3hdm2	95	65.070	ENSCPBG00000013922	R3HDM2	99	62.343	Chrysemys_picta_bellii
ENSMAMG00000009793	r3hdm2	99	64.711	ENSCANG00000043807	R3HDM2	99	64.771	Colobus_angolensis_palliatus
ENSMAMG00000009793	r3hdm2	99	63.462	ENSCGRG00001017324	R3hdm2	99	62.128	Cricetulus_griseus_chok1gshd
ENSMAMG00000009793	r3hdm2	99	63.462	ENSCGRG00000003862	R3hdm2	99	62.128	Cricetulus_griseus_crigri
ENSMAMG00000009793	r3hdm2	100	92.329	ENSCSEG00000010925	r3hdm2	99	93.313	Cynoglossus_semilaevis
ENSMAMG00000009793	r3hdm2	100	90.207	ENSCVAG00000009058	r3hdm2	100	90.274	Cyprinodon_variegatus
ENSMAMG00000009793	r3hdm2	94	72.349	ENSDARG00000102610	r3hdm2	99	72.970	Danio_rerio
ENSMAMG00000009793	r3hdm2	99	64.399	ENSDNOG00000015033	R3HDM2	100	65.456	Dasypus_novemcinctus
ENSMAMG00000009793	r3hdm2	95	62.860	ENSDORG00000011462	R3hdm2	99	63.121	Dipodomys_ordii
ENSMAMG00000009793	r3hdm2	95	66.923	ENSEASG00005007091	R3HDM2	96	66.794	Equus_asinus_asinus
ENSMAMG00000009793	r3hdm2	95	66.475	ENSECAG00000003157	R3HDM2	99	65.289	Equus_caballus
ENSMAMG00000009793	r3hdm2	100	80.804	ENSELUG00000015969	r3hdm2	100	79.464	Esox_lucius
ENSMAMG00000009793	r3hdm2	95	66.731	ENSFCAG00000000192	R3HDM2	98	64.266	Felis_catus
ENSMAMG00000009793	r3hdm2	81	63.194	ENSFALG00000000255	R3HDM2	98	60.503	Ficedula_albicollis
ENSMAMG00000009793	r3hdm2	95	66.922	ENSFDAG00000019385	R3HDM2	99	64.312	Fukomys_damarensis
ENSMAMG00000009793	r3hdm2	100	90.833	ENSFHEG00000016484	r3hdm2	100	91.458	Fundulus_heteroclitus
ENSMAMG00000009793	r3hdm2	95	82.685	ENSGMOG00000007961	r3hdm2	100	82.913	Gadus_morhua
ENSMAMG00000009793	r3hdm2	99	64.220	ENSGALG00000043736	R3HDM2	99	63.486	Gallus_gallus
ENSMAMG00000009793	r3hdm2	100	92.301	ENSGAFG00000013887	r3hdm2	100	92.108	Gambusia_affinis
ENSMAMG00000009793	r3hdm2	95	91.059	ENSGACG00000006442	r3hdm2	100	91.748	Gasterosteus_aculeatus
ENSMAMG00000009793	r3hdm2	95	64.601	ENSGAGG00000017797	R3HDM2	99	61.270	Gopherus_agassizii
ENSMAMG00000009793	r3hdm2	99	65.009	ENSGGOG00000015007	R3HDM2	99	64.954	Gorilla_gorilla
ENSMAMG00000009793	r3hdm2	99	65.406	ENSHGLG00000010434	-	99	64.765	Heterocephalus_glaber_female
ENSMAMG00000009793	r3hdm2	89	59.809	ENSHGLG00000010421	-	97	58.017	Heterocephalus_glaber_female
ENSMAMG00000009793	r3hdm2	99	65.314	ENSHGLG00100004183	-	99	64.673	Heterocephalus_glaber_male
ENSMAMG00000009793	r3hdm2	95	57.669	ENSHGLG00100018871	-	98	56.318	Heterocephalus_glaber_male
ENSMAMG00000009793	r3hdm2	100	89.792	ENSHCOG00000001142	r3hdm2	97	88.941	Hippocampus_comes
ENSMAMG00000009793	r3hdm2	100	75.872	ENSIPUG00000023873	r3hdm2	100	75.963	Ictalurus_punctatus
ENSMAMG00000009793	r3hdm2	99	60.704	ENSSTOG00000013424	R3HDM2	99	59.531	Ictidomys_tridecemlineatus
ENSMAMG00000009793	r3hdm2	99	64.489	ENSJJAG00000010001	R3hdm2	99	64.305	Jaculus_jaculus
ENSMAMG00000009793	r3hdm2	100	92.521	ENSKMAG00000012695	r3hdm2	97	93.036	Kryptolebias_marmoratus
ENSMAMG00000009793	r3hdm2	100	93.327	ENSLBEG00000013115	r3hdm2	96	92.251	Labrus_bergylta
ENSMAMG00000009793	r3hdm2	95	66.120	ENSLACG00000019064	r3hdm2	100	64.348	Latimeria_chalumnae
ENSMAMG00000009793	r3hdm2	99	74.215	ENSLOCG00000005976	r3hdm2	99	73.549	Lepisosteus_oculatus
ENSMAMG00000009793	r3hdm2	99	65.431	ENSLAFG00000006510	R3HDM2	99	65.246	Loxodonta_africana
ENSMAMG00000009793	r3hdm2	99	65.009	ENSMFAG00000036385	R3HDM2	99	64.954	Macaca_fascicularis
ENSMAMG00000009793	r3hdm2	99	65.562	ENSMMUG00000021789	R3HDM2	99	65.505	Macaca_mulatta
ENSMAMG00000009793	r3hdm2	99	65.133	ENSMNEG00000025314	R3HDM2	99	64.954	Macaca_nemestrina
ENSMAMG00000009793	r3hdm2	99	65.101	ENSMLEG00000028915	R3HDM2	99	65.046	Mandrillus_leucophaeus
ENSMAMG00000009793	r3hdm2	100	95.181	ENSMZEG00005007319	r3hdm2	100	94.625	Maylandia_zebra
ENSMAMG00000009793	r3hdm2	99	63.343	ENSMICG00000012389	R3HDM2	99	62.854	Microcebus_murinus
ENSMAMG00000009793	r3hdm2	99	64.246	ENSMOCG00000014425	R3hdm2	99	62.455	Microtus_ochrogaster
ENSMAMG00000009793	r3hdm2	95	86.935	ENSMMOG00000007448	r3hdm2	99	85.873	Mola_mola
ENSMAMG00000009793	r3hdm2	87	88.441	ENSMALG00000010211	r3hdm2	98	88.091	Monopterus_albus
ENSMAMG00000009793	r3hdm2	95	66.154	MGP_CAROLIEiJ_G0015896	R3hdm2	99	64.103	Mus_caroli
ENSMAMG00000009793	r3hdm2	99	64.614	ENSMUSG00000025404	R3hdm2	99	64.161	Mus_musculus
ENSMAMG00000009793	r3hdm2	95	65.929	MGP_PahariEiJ_G0031189	R3hdm2	99	64.161	Mus_pahari
ENSMAMG00000009793	r3hdm2	99	64.587	MGP_SPRETEiJ_G0016722	R3hdm2	99	63.861	Mus_spretus
ENSMAMG00000009793	r3hdm2	98	64.519	ENSMPUG00000001818	R3HDM2	96	64.041	Mustela_putorius_furo
ENSMAMG00000009793	r3hdm2	99	65.314	ENSMLUG00000004980	R3HDM2	99	65.378	Myotis_lucifugus
ENSMAMG00000009793	r3hdm2	99	64.614	ENSNGAG00000018800	R3hdm2	99	64.673	Nannospalax_galili
ENSMAMG00000009793	r3hdm2	94	86.386	ENSNBRG00000004483	r3hdm2	100	86.286	Neolamprologus_brichardi
ENSMAMG00000009793	r3hdm2	99	64.977	ENSNLEG00000017351	R3HDM2	99	64.890	Nomascus_leucogenys
ENSMAMG00000009793	r3hdm2	99	56.590	ENSMEUG00000008588	R3HDM2	99	55.342	Notamacropus_eugenii
ENSMAMG00000009793	r3hdm2	99	58.532	ENSOPRG00000013670	R3HDM2	99	58.175	Ochotona_princeps
ENSMAMG00000009793	r3hdm2	100	90.996	ENSONIG00000005075	r3hdm2	100	89.943	Oreochromis_niloticus
ENSMAMG00000009793	r3hdm2	99	65.041	ENSOCUG00000013258	R3HDM2	99	64.587	Oryctolagus_cuniculus
ENSMAMG00000009793	r3hdm2	100	91.729	ENSORLG00000005502	r3hdm2	100	91.381	Oryzias_latipes
ENSMAMG00000009793	r3hdm2	100	91.777	ENSORLG00020017069	r3hdm2	100	91.423	Oryzias_latipes_hni
ENSMAMG00000009793	r3hdm2	100	91.871	ENSORLG00015012735	r3hdm2	100	91.517	Oryzias_latipes_hsok
ENSMAMG00000009793	r3hdm2	100	83.429	ENSOMEG00000018079	r3hdm2	99	82.550	Oryzias_melastigma
ENSMAMG00000009793	r3hdm2	99	62.640	ENSOGAG00000012055	R3HDM2	99	62.500	Otolemur_garnettii
ENSMAMG00000009793	r3hdm2	96	56.973	ENSOGAG00000027966	-	99	55.501	Otolemur_garnettii
ENSMAMG00000009793	r3hdm2	99	63.009	ENSOARG00000006929	R3HDM2	99	62.630	Ovis_aries
ENSMAMG00000009793	r3hdm2	99	65.193	ENSPPAG00000034395	R3HDM2	99	65.138	Pan_paniscus
ENSMAMG00000009793	r3hdm2	95	65.109	ENSPPRG00000009240	R3HDM2	99	62.358	Panthera_pardus
ENSMAMG00000009793	r3hdm2	95	65.109	ENSPTIG00000008752	R3HDM2	99	62.358	Panthera_tigris_altaica
ENSMAMG00000009793	r3hdm2	99	65.101	ENSPTRG00000046457	R3HDM2	99	65.046	Pan_troglodytes
ENSMAMG00000009793	r3hdm2	95	65.507	ENSPANG00000024002	R3HDM2	97	64.752	Papio_anubis
ENSMAMG00000009793	r3hdm2	100	79.644	ENSPKIG00000003171	r3hdm2	100	80.094	Paramormyrops_kingsleyae
ENSMAMG00000009793	r3hdm2	64	55.096	ENSPSIG00000006954	R3HDM2	99	53.343	Pelodiscus_sinensis
ENSMAMG00000009793	r3hdm2	94	86.182	ENSPMGG00000007061	r3hdm2	99	83.828	Periophthalmus_magnuspinnatus
ENSMAMG00000009793	r3hdm2	99	64.358	ENSPEMG00000015964	R3hdm2	99	63.753	Peromyscus_maniculatus_bairdii
ENSMAMG00000009793	r3hdm2	99	63.118	ENSPCIG00000023841	R3HDM2	99	62.108	Phascolarctos_cinereus
ENSMAMG00000009793	r3hdm2	94	95.493	ENSPFOG00000006077	r3hdm2	92	95.493	Poecilia_formosa
ENSMAMG00000009793	r3hdm2	100	92.185	ENSPLAG00000002971	r3hdm2	100	92.257	Poecilia_latipinna
ENSMAMG00000009793	r3hdm2	100	92.185	ENSPMEG00000005330	r3hdm2	100	92.257	Poecilia_mexicana
ENSMAMG00000009793	r3hdm2	100	91.759	ENSPREG00000008424	r3hdm2	100	91.829	Poecilia_reticulata
ENSMAMG00000009793	r3hdm2	97	59.961	ENSPPYG00000004685	R3HDM2	80	59.923	Pongo_abelii
ENSMAMG00000009793	r3hdm2	87	78.092	ENSPCAG00000014642	R3HDM2	92	79.152	Procavia_capensis
ENSMAMG00000009793	r3hdm2	99	63.394	ENSPCOG00000013201	R3HDM2	99	63.886	Propithecus_coquereli
ENSMAMG00000009793	r3hdm2	99	65.129	ENSPVAG00000003967	R3HDM2	99	64.765	Pteropus_vampyrus
ENSMAMG00000009793	r3hdm2	94	86.727	ENSPNYG00000013479	r3hdm2	100	85.410	Pundamilia_nyererei
ENSMAMG00000009793	r3hdm2	100	75.293	ENSPNAG00000017473	r3hdm2	100	77.006	Pygocentrus_nattereri
ENSMAMG00000009793	r3hdm2	95	65.643	ENSRNOG00000007801	R3hdm2	99	63.495	Rattus_norvegicus
ENSMAMG00000009793	r3hdm2	99	62.262	ENSRBIG00000037403	R3HDM2	99	61.553	Rhinopithecus_bieti
ENSMAMG00000009793	r3hdm2	99	65.654	ENSRROG00000022271	R3HDM2	99	65.046	Rhinopithecus_roxellana
ENSMAMG00000009793	r3hdm2	99	63.671	ENSSBOG00000023547	R3HDM2	99	63.258	Saimiri_boliviensis_boliviensis
ENSMAMG00000009793	r3hdm2	99	63.085	ENSSHAG00000003511	R3HDM2	99	62.919	Sarcophilus_harrisii
ENSMAMG00000009793	r3hdm2	100	93.791	ENSSMAG00000012073	r3hdm2	100	93.494	Scophthalmus_maximus
ENSMAMG00000009793	r3hdm2	100	95.951	ENSSDUG00000019269	r3hdm2	100	95.951	Seriola_dumerili
ENSMAMG00000009793	r3hdm2	100	96.104	ENSSLDG00000005252	r3hdm2	100	96.104	Seriola_lalandi_dorsalis
ENSMAMG00000009793	r3hdm2	90	59.794	ENSSARG00000003958	R3HDM2	80	71.491	Sorex_araneus
ENSMAMG00000009793	r3hdm2	99	60.148	ENSSPUG00000014132	R3HDM2	99	58.150	Sphenodon_punctatus
ENSMAMG00000009793	r3hdm2	100	95.767	ENSSPAG00000022594	r3hdm2	100	95.767	Stegastes_partitus
ENSMAMG00000009793	r3hdm2	99	63.318	ENSSSCG00000026498	R3HDM2	100	65.838	Sus_scrofa
ENSMAMG00000009793	r3hdm2	72	63.544	ENSTGUG00000015881	R3HDM2	99	62.437	Taeniopygia_guttata
ENSMAMG00000009793	r3hdm2	95	84.693	ENSTRUG00000015075	r3hdm2	99	82.609	Takifugu_rubripes
ENSMAMG00000009793	r3hdm2	91	95.604	ENSTNIG00000007057	r3hdm2	90	95.604	Tetraodon_nigroviridis
ENSMAMG00000009793	r3hdm2	82	64.094	ENSTBEG00000015967	R3HDM2	78	64.120	Tupaia_belangeri
ENSMAMG00000009793	r3hdm2	93	70.439	ENSTTRG00000013082	R3HDM2	87	69.574	Tursiops_truncatus
ENSMAMG00000009793	r3hdm2	95	67.091	ENSUAMG00000020913	R3HDM2	99	64.804	Ursus_americanus
ENSMAMG00000009793	r3hdm2	91	66.564	ENSUMAG00000019179	R3HDM2	96	64.190	Ursus_maritimus
ENSMAMG00000009793	r3hdm2	89	79.545	ENSVPAG00000008656	R3HDM2	88	80.471	Vicugna_pacos
ENSMAMG00000009793	r3hdm2	93	66.568	ENSVVUG00000018014	R3HDM2	95	64.419	Vulpes_vulpes
ENSMAMG00000009793	r3hdm2	99	61.602	ENSXETG00000017153	r3hdm2	99	59.652	Xenopus_tropicalis
ENSMAMG00000009793	r3hdm2	87	86.309	ENSXCOG00000013882	r3hdm2	100	85.165	Xiphophorus_couchianus
ENSMAMG00000009793	r3hdm2	100	91.852	ENSXMAG00000017978	r3hdm2	100	91.922	Xiphophorus_maculatus