EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000009817 (Gene tree)
Gene ID: 113139065
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 250-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 10736 bases
Position: chrOOHQ01000107.1:17896884-17907619
Accession: 113139065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000014475	zf-C2H2	PF00096.26	5.5e-36	1	5
ENSMAMP00000014475	zf-C2H2	PF00096.26	5.5e-36	2	5
ENSMAMP00000014475	zf-C2H2	PF00096.26	5.5e-36	3	5
ENSMAMP00000014475	zf-C2H2	PF00096.26	5.5e-36	4	5
ENSMAMP00000014475	zf-C2H2	PF00096.26	5.5e-36	5	5
ENSMAMP00000014496	zf-C2H2	PF00096.26	3.2e-07	1	2
ENSMAMP00000014496	zf-C2H2	PF00096.26	3.2e-07	2	2
ENSMAMP00000014475	zf-met	PF12874.7	4.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000014881	-	2832	-	ENSMAMP00000014475	943 (aa)	XP_026177806	UPI000E463293
ENSMAMT00000014902	-	300	-	ENSMAMP00000014496	99 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000009817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000009817's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000009817	-	70	40.278	ENSMAMG00000017911	ZNF319	89	34.686
ENSMAMG00000009817	-	89	38.462	ENSMAMG00000022206	-	88	43.077
ENSMAMG00000009817	-	78	33.750	ENSMAMG00000015632	snai2	65	33.582
ENSMAMG00000009817	-	72	46.032	ENSMAMG00000016542	-	70	36.283
ENSMAMG00000009817	-	79	46.970	ENSMAMG00000018114	-	84	42.466
ENSMAMG00000009817	-	71	43.836	ENSMAMG00000013025	-	51	41.313
ENSMAMG00000009817	-	72	42.857	ENSMAMG00000016484	-	94	34.211
ENSMAMG00000009817	-	81	45.455	ENSMAMG00000001157	znf236	55	40.187
ENSMAMG00000009817	-	61	36.508	ENSMAMG00000014743	-	68	42.657
ENSMAMG00000009817	-	69	44.444	ENSMAMG00000000789	-	74	34.821
ENSMAMG00000009817	-	72	46.875	ENSMAMG00000017946	-	77	40.143
ENSMAMG00000009817	-	78	43.939	ENSMAMG00000016087	-	84	43.434
ENSMAMG00000009817	-	63	43.548	ENSMAMG00000016519	-	88	39.053
ENSMAMG00000009817	-	62	42.188	ENSMAMG00000022145	-	63	38.122
ENSMAMG00000009817	-	61	40.580	ENSMAMG00000018536	-	62	31.250
ENSMAMG00000009817	-	84	38.571	ENSMAMG00000009604	si:dkey-89b17.4	84	33.981
ENSMAMG00000009817	-	82	50.794	ENSMAMG00000010902	-	60	41.219
ENSMAMG00000009817	-	69	42.188	ENSMAMG00000018137	-	58	33.945
ENSMAMG00000009817	-	82	43.750	ENSMAMG00000018071	-	66	39.655
ENSMAMG00000009817	-	75	41.250	ENSMAMG00000013419	prdm5	74	33.236
ENSMAMG00000009817	-	75	43.284	ENSMAMG00000002731	znf1056	84	34.663
ENSMAMG00000009817	-	89	46.154	ENSMAMG00000002083	-	96	37.895
ENSMAMG00000009817	-	71	35.616	ENSMAMG00000023622	-	62	32.432
ENSMAMG00000009817	-	78	49.020	ENSMAMG00000004684	znf526	56	35.455
ENSMAMG00000009817	-	71	42.857	ENSMAMG00000004457	PRDM15	53	30.899
ENSMAMG00000009817	-	81	37.349	ENSMAMG00000015087	znf319b	81	32.558
ENSMAMG00000009817	-	71	41.333	ENSMAMG00000018743	-	92	31.308
ENSMAMG00000009817	-	70	41.429	ENSMAMG00000002166	zbtb41	62	30.599
ENSMAMG00000009817	-	72	46.875	ENSMAMG00000016119	-	85	45.000
ENSMAMG00000009817	-	79	43.662	ENSMAMG00000003040	gfi1b	61	37.500
ENSMAMG00000009817	-	86	47.692	ENSMAMG00000015670	-	67	36.013
ENSMAMG00000009817	-	79	33.333	ENSMAMG00000010384	-	57	31.788
ENSMAMG00000009817	-	72	50.000	ENSMAMG00000022152	-	51	45.349
ENSMAMG00000009817	-	81	41.667	ENSMAMG00000023490	-	56	41.520
ENSMAMG00000009817	-	100	30.189	ENSMAMG00000021196	zgc:171929	68	43.820
ENSMAMG00000009817	-	69	39.437	ENSMAMG00000016634	si:ch211-216l23.1	74	38.393
ENSMAMG00000009817	-	69	39.437	ENSMAMG00000023492	-	77	37.126
ENSMAMG00000009817	-	78	42.857	ENSMAMG00000007352	-	97	38.144
ENSMAMG00000009817	-	89	47.692	ENSMAMG00000006312	-	93	39.677
ENSMAMG00000009817	-	78	41.667	ENSMAMG00000022154	-	62	43.077
ENSMAMG00000009817	-	70	45.833	ENSMAMG00000009555	-	57	37.302
ENSMAMG00000009817	-	77	43.056	ENSMAMG00000017939	-	88	37.908
ENSMAMG00000009817	-	70	45.312	ENSMAMG00000014734	-	61	43.939
ENSMAMG00000009817	-	68	41.429	ENSMAMG00000019385	-	81	49.153
ENSMAMG00000009817	-	62	39.062	ENSMAMG00000015434	-	73	50.000
ENSMAMG00000009817	-	78	38.462	ENSMAMG00000022502	-	95	39.459
ENSMAMG00000009817	-	73	47.692	ENSMAMG00000019301	-	99	39.167
ENSMAMG00000009817	-	71	41.538	ENSMAMG00000022147	-	87	38.158
ENSMAMG00000009817	-	69	36.620	ENSMAMG00000009313	znf646	68	35.455
ENSMAMG00000009817	-	83	40.278	ENSMAMG00000009051	-	90	39.614
ENSMAMG00000009817	-	70	36.111	ENSMAMG00000011698	scrt1b	56	36.486
ENSMAMG00000009817	-	76	39.683	ENSMAMG00000001808	zbtb47b	67	36.585
ENSMAMG00000009817	-	72	46.032	ENSMAMG00000014758	-	83	43.290

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000009817	-	70	40.278	ENSAPOG00000005767	-	100	47.059	Acanthochromis_polyacanthus
ENSMAMG00000009817	-	83	41.096	ENSAOCG00000000570	-	63	43.216	Amphiprion_ocellaris
ENSMAMG00000009817	-	76	41.538	ENSAPEG00000018796	-	75	42.045	Amphiprion_percula
ENSMAMG00000009817	-	76	56.478	ENSCVAG00000018507	-	99	56.667	Cyprinodon_variegatus
ENSMAMG00000009817	-	70	59.375	ENSFHEG00000022534	-	96	49.206	Fundulus_heteroclitus
ENSMAMG00000009817	-	77	47.887	ENSKMAG00000013745	-	64	40.081	Kryptolebias_marmoratus
ENSMAMG00000009817	-	71	47.692	ENSMZEG00005016808	-	79	45.175	Maylandia_zebra
ENSMAMG00000009817	-	70	44.776	ENSMALG00000012116	-	93	44.253	Monopterus_albus
ENSMAMG00000009817	-	70	38.889	ENSMALG00000012757	-	70	41.818	Monopterus_albus
ENSMAMG00000009817	-	89	42.254	ENSMALG00000004579	-	93	42.222	Monopterus_albus
ENSMAMG00000009817	-	72	42.188	ENSMALG00000001085	-	93	38.554	Monopterus_albus
ENSMAMG00000009817	-	70	42.857	ENSMALG00000008930	-	80	39.394	Monopterus_albus
ENSMAMG00000009817	-	70	43.750	ENSNBRG00000013501	-	82	44.056	Neolamprologus_brichardi
ENSMAMG00000009817	-	69	61.905	ENSOMEG00000021420	-	99	47.674	Oryzias_melastigma
ENSMAMG00000009817	-	72	45.841	ENSPREG00000014898	-	95	45.315	Poecilia_reticulata
ENSMAMG00000009817	-	70	39.683	ENSPNYG00000007756	-	90	35.950	Pundamilia_nyererei
ENSMAMG00000009817	-	96	60.526	ENSSMAG00000017494	-	100	60.570	Scophthalmus_maximus
ENSMAMG00000009817	-	87	46.875	ENSSDUG00000001263	-	86	42.328	Seriola_dumerili
ENSMAMG00000009817	-	98	66.561	ENSSDUG00000000496	-	99	67.269	Seriola_dumerili
ENSMAMG00000009817	-	81	46.575	ENSSLDG00000023661	-	89	37.984	Seriola_lalandi_dorsalis
ENSMAMG00000009817	-	71	48.438	ENSTRUG00000022919	-	77	42.609	Takifugu_rubripes
ENSMAMG00000009817	-	70	48.438	ENSTRUG00000022206	-	55	40.598	Takifugu_rubripes
ENSMAMG00000009817	-	70	43.750	ENSTRUG00000012273	-	92	38.158	Takifugu_rubripes
ENSMAMG00000009817	-	70	45.833	ENSTRUG00000023925	-	59	43.299	Takifugu_rubripes
ENSMAMG00000009817	-	79	44.262	ENSTRUG00000001268	-	96	40.532	Takifugu_rubripes
ENSMAMG00000009817	-	88	46.479	ENSTRUG00000003111	-	85	44.186	Takifugu_rubripes
ENSMAMG00000009817	-	70	43.750	ENSTNIG00000005856	-	99	40.513	Tetraodon_nigroviridis
ENSMAMG00000009817	-	89	39.506	ENSXCOG00000019492	-	99	40.394	Xiphophorus_couchianus
ENSMAMG00000009817	-	82	41.538	ENSXMAG00000022297	-	99	39.583	Xiphophorus_maculatus