EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000009965 (Gene tree)
Gene ID: 113123282
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 41682 bases
Position: chrOOHQ01000093.1:3907765-3949446
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000014677	LRRFIP	PF09738.9	1.3e-67	1	1
ENSMAMP00000014869	LRRFIP	PF09738.9	2.9e-59	1	1
ENSMAMP00000014687	LRRFIP	PF09738.9	6.9e-58	1	1
ENSMAMP00000014746	LRRFIP	PF09738.9	2.9e-57	1	2
ENSMAMP00000014746	LRRFIP	PF09738.9	2.9e-57	2	2
ENSMAMP00000014815	LRRFIP	PF09738.9	8.7e-54	1	2
ENSMAMP00000014815	LRRFIP	PF09738.9	8.7e-54	2	2
ENSMAMP00000014792	LRRFIP	PF09738.9	4.9e-51	1	2
ENSMAMP00000014792	LRRFIP	PF09738.9	4.9e-51	2	2
ENSMAMP00000014850	LRRFIP	PF09738.9	4.8e-50	1	1
ENSMAMP00000014704	LRRFIP	PF09738.9	1.5e-47	1	2
ENSMAMP00000014704	LRRFIP	PF09738.9	1.5e-47	2	2
ENSMAMP00000014724	LRRFIP	PF09738.9	2.2e-47	1	2
ENSMAMP00000014724	LRRFIP	PF09738.9	2.2e-47	2	2
ENSMAMP00000014760	LRRFIP	PF09738.9	1.6e-46	1	2
ENSMAMP00000014760	LRRFIP	PF09738.9	1.6e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000015094	-	3803	-	ENSMAMP00000014687	1206 (aa)	-	-
ENSMAMT00000015132	-	4428	-	ENSMAMP00000014724	1475 (aa)	-	-
ENSMAMT00000015264	-	3741	-	ENSMAMP00000014850	1246 (aa)	-	-
ENSMAMT00000015155	-	4419	-	ENSMAMP00000014746	1472 (aa)	-	-
ENSMAMT00000015283	-	3597	-	ENSMAMP00000014869	1198 (aa)	-	-
ENSMAMT00000015171	-	4401	-	ENSMAMP00000014760	1466 (aa)	-	-
ENSMAMT00000015084	-	3917	-	ENSMAMP00000014677	1244 (aa)	-	-
ENSMAMT00000015230	-	4278	-	ENSMAMP00000014815	1425 (aa)	-	-
ENSMAMT00000015204	-	4359	-	ENSMAMP00000014792	1452 (aa)	-	-
ENSMAMT00000015111	-	4491	-	ENSMAMP00000014704	1496 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000009965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000009965's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000009965	-	92	64.559	ENSAPOG00000013642	-	83	64.559	Acanthochromis_polyacanthus
ENSMAMG00000009965	-	86	97.368	ENSAPEG00000002932	-	78	97.368	Amphiprion_percula
ENSMAMG00000009965	-	93	93.333	ENSATEG00000007942	-	94	94.737	Anabas_testudineus
ENSMAMG00000009965	-	98	94.737	ENSACLG00000001232	-	85	94.737	Astatotilapia_calliptera
ENSMAMG00000009965	-	52	54.030	ENSGAFG00000011211	lrrfip1a	71	97.368	Gambusia_affinis
ENSMAMG00000009965	-	98	90.833	ENSHBUG00000001453	-	85	94.737	Haplochromis_burtoni
ENSMAMG00000009965	-	85	97.368	ENSLBEG00000027720	lrrfip1a	72	93.305	Labrus_bergylta
ENSMAMG00000009965	-	91	52.916	ENSMALG00000007933	-	96	52.876	Monopterus_albus
ENSMAMG00000009965	-	86	56.900	ENSNBRG00000017819	-	83	89.333	Neolamprologus_brichardi
ENSMAMG00000009965	-	90	55.119	ENSPNYG00000011163	-	81	88.764	Pundamilia_nyererei
ENSMAMG00000009965	-	51	93.333	ENSSMAG00000018506	lrrfip1a	98	97.368	Scophthalmus_maximus
ENSMAMG00000009965	-	98	75.676	ENSSDUG00000006643	-	98	98.701	Seriola_dumerili