EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAMG00000010025 (Gene tree)
Gene ID
113131190
Gene Symbol
pabpc4
Alias
cb12|sb:cb12
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Minus strand
Length
9408 bases
Position
chrOOHQ01000119.1:14339560-14348967
Accession
113131190
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000014862PABPPF00658.186.7e-3111
ENSMAMP00000014845PABPPF00658.187.1e-3111
ENSMAMP00000014825PABPPF00658.183.6e-2711
ENSMAMP00000014825RRM_5PF13893.61.6e-0911
ENSMAMP00000014845RRM_5PF13893.61.9e-0911
ENSMAMP00000014862RRM_5PF13893.67.8e-0711
ENSMAMP00000014825RRM_1PF00076.229.1e-9114
ENSMAMP00000014825RRM_1PF00076.229.1e-9124
ENSMAMP00000014825RRM_1PF00076.229.1e-9134
ENSMAMP00000014825RRM_1PF00076.229.1e-9144
ENSMAMP00000014845RRM_1PF00076.221.1e-9014
ENSMAMP00000014845RRM_1PF00076.221.1e-9024
ENSMAMP00000014845RRM_1PF00076.221.1e-9034
ENSMAMP00000014845RRM_1PF00076.221.1e-9044
ENSMAMP00000014862RRM_1PF00076.223.6e-8414
ENSMAMP00000014862RRM_1PF00076.223.6e-8424
ENSMAMP00000014862RRM_1PF00076.223.6e-8434
ENSMAMP00000014862RRM_1PF00076.223.6e-8444
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000015276-2731-ENSMAMP00000014862581 (aa)--
ENSMAMT00000015239-1806-ENSMAMP00000014825601 (aa)--
ENSMAMT00000015258-2869XM_026308192ENSMAMP00000014845627 (aa)XP_026163977UPI000E46105F
Gene Model
Click here to download ENSMAMG00000010025's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000010025's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAMG00000010025pabpc49976.572ENSMAMG00000014610pabpc1b9976.667
ENSMAMG00000010025pabpc45636.782ENSMAMG00000015079celf3b7336.364
ENSMAMG00000010025pabpc49875.941ENSMAMG00000004502-9783.696
ENSMAMG00000010025pabpc45439.535ENSMAMG00000023208-5739.535
ENSMAMG00000010025pabpc46134.940ENSMAMG00000004000elavl49334.940
ENSMAMG00000010025pabpc45535.106ENSMAMG00000006701-9535.106
ENSMAMG00000010025pabpc45537.500ENSMAMG00000017876-5137.500
ENSMAMG00000010025pabpc46134.737ENSMAMG00000003821rbms2a6235.632
ENSMAMG00000010025pabpc46135.238ENSMAMG00000010052celf16435.238
ENSMAMG00000010025pabpc46136.145ENSMAMG00000004806ELAVL29236.145
ENSMAMG00000010025pabpc46037.500ENSMAMG00000019440celf5a6237.500
ENSMAMG00000010025pabpc49967.434ENSMAMG00000011854pabpc1l9867.105
ENSMAMG00000010025pabpc45430.682ENSMAMG00000020566-7030.682
ENSMAMG00000010025pabpc46038.667ENSMAMG00000024043rbms38338.667
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000010025pabpc49984.776ENSG00000090621PABPC49996.396Homo_sapiens
ENSMAMG00000010025pabpc410097.448ENSAPOG00000001161pabpc410097.448Acanthochromis_polyacanthus
ENSMAMG00000010025pabpc49979.248ENSAMEG00000011535-9979.394Ailuropoda_melanoleuca
ENSMAMG00000010025pabpc49849.436ENSAMEG00000015083-9848.387Ailuropoda_melanoleuca
ENSMAMG00000010025pabpc410096.361ENSACIG00000023343pabpc410096.361Amphilophus_citrinellus
ENSMAMG00000010025pabpc410097.608ENSAOCG00000021529pabpc410097.608Amphiprion_ocellaris
ENSMAMG00000010025pabpc410097.608ENSAPEG00000019196pabpc410097.608Amphiprion_percula
ENSMAMG00000010025pabpc410097.771ENSATEG00000007402pabpc410097.771Anabas_testudineus
ENSMAMG00000010025pabpc49985.512ENSAPLG00000009729-9985.215Anas_platyrhynchos
ENSMAMG00000010025pabpc49884.929ENSACAG00000002544PABPC49983.871Anolis_carolinensis
ENSMAMG00000010025pabpc49982.059ENSANAG00000025079PABPC49983.201Aotus_nancymaae
ENSMAMG00000010025pabpc410097.289ENSACLG00000019558pabpc410097.289Astatotilapia_calliptera
ENSMAMG00000010025pabpc49992.821ENSAMXG00000018779pabpc49893.576Astyanax_mexicanus
ENSMAMG00000010025pabpc49981.538ENSBTAG00000017125PABPC49981.240Bos_taurus
ENSMAMG00000010025pabpc46084.431ENSBTAG00000048536-9584.431Bos_taurus
ENSMAMG00000010025pabpc47880.804ENSCJAG00000045953-8579.018Callithrix_jacchus
ENSMAMG00000010025pabpc49982.059ENSCJAG00000002512-9983.201Callithrix_jacchus
ENSMAMG00000010025pabpc49982.059ENSCAFG00000003081PABPC49982.884Canis_familiaris
ENSMAMG00000010025pabpc49882.651ENSCAFG00020004161PABPC49979.545Canis_lupus_dingo
ENSMAMG00000010025pabpc49965.630ENSCHIG00000023385-9965.566Capra_hircus
ENSMAMG00000010025pabpc49979.248ENSCHIG00000019398-9979.394Capra_hircus
ENSMAMG00000010025pabpc49983.491ENSTSYG00000006532PABPC49983.201Carlito_syrichta
ENSMAMG00000010025pabpc49982.132ENSCAPG00000015984PABPC49982.962Cavia_aperea
ENSMAMG00000010025pabpc49982.371ENSCPOG00000009552PABPC49983.201Cavia_porcellus
ENSMAMG00000010025pabpc49982.059ENSCCAG00000037306PABPC49983.201Cebus_capucinus
ENSMAMG00000010025pabpc49982.059ENSCATG00000042164PABPC49983.201Cercocebus_atys
ENSMAMG00000010025pabpc49982.215ENSCLAG00000011899PABPC49983.043Chinchilla_lanigera
ENSMAMG00000010025pabpc49980.000ENSCSAG00000001135PABPC49979.545Chlorocebus_sabaeus
ENSMAMG00000010025pabpc48688.947ENSCHOG00000005327PABPC47989.488Choloepus_hoffmanni
ENSMAMG00000010025pabpc49986.299ENSCPBG00000001038PABPC49986.010Chrysemys_picta_bellii
ENSMAMG00000010025pabpc49882.278ENSCANG00000034177PABPC49983.441Colobus_angolensis_palliatus
ENSMAMG00000010025pabpc49885.522ENSCGRG00001018166Pabpc49884.765Cricetulus_griseus_chok1gshd
ENSMAMG00000010025pabpc49785.812ENSCGRG00000009777Pabpc49885.033Cricetulus_griseus_crigri
ENSMAMG00000010025pabpc410096.810ENSCSEG00000000130pabpc410096.810Cynoglossus_semilaevis
ENSMAMG00000010025pabpc49996.104ENSCVAG00000019246pabpc49996.552Cyprinodon_variegatus
ENSMAMG00000010025pabpc49893.142ENSDARG00000059259pabpc410092.893Danio_rerio
ENSMAMG00000010025pabpc49880.877ENSDNOG00000018444-9981.786Dasypus_novemcinctus
ENSMAMG00000010025pabpc49981.567ENSDORG00000011581Pabpc49981.677Dipodomys_ordii
ENSMAMG00000010025pabpc49990.625ENSETEG00000018453-8490.625Echinops_telfairi
ENSMAMG00000010025pabpc48554.461ENSETEG00000009172-9952.564Echinops_telfairi
ENSMAMG00000010025pabpc49878.037ENSEBUG00000013782pabpc49976.911Eptatretus_burgeri
ENSMAMG00000010025pabpc49976.190ENSEBUG00000000992pabpc410075.873Eptatretus_burgeri
ENSMAMG00000010025pabpc49979.398ENSEASG00005014119PABPC49979.545Equus_asinus_asinus
ENSMAMG00000010025pabpc49979.398ENSECAG00000009396PABPC49979.545Equus_caballus
ENSMAMG00000010025pabpc49879.213ENSEEUG00000002962PABPC49978.182Erinaceus_europaeus
ENSMAMG00000010025pabpc49892.994ENSELUG00000003195pabpc49992.698Esox_lucius
ENSMAMG00000010025pabpc49982.059ENSFCAG00000015254-9982.884Felis_catus
ENSMAMG00000010025pabpc49985.557ENSFALG00000000543PABPC49985.669Ficedula_albicollis
ENSMAMG00000010025pabpc48951.695ENSFDAG00000010581-9949.396Fukomys_damarensis
ENSMAMG00000010025pabpc49979.549ENSFDAG00000020016-9979.545Fukomys_damarensis
ENSMAMG00000010025pabpc49996.006ENSFHEG00000007548pabpc49996.764Fundulus_heteroclitus
ENSMAMG00000010025pabpc410091.066ENSGMOG00000019025pabpc49991.733Gadus_morhua
ENSMAMG00000010025pabpc49986.142ENSGALG00000003800PABPC49985.851Gallus_gallus
ENSMAMG00000010025pabpc49895.462ENSGAFG00000018195pabpc49898.889Gambusia_affinis
ENSMAMG00000010025pabpc410094.737ENSGACG00000007179pabpc49995.307Gasterosteus_aculeatus
ENSMAMG00000010025pabpc49986.457ENSGAGG00000001888PABPC49986.169Gopherus_agassizii
ENSMAMG00000010025pabpc49982.059ENSGGOG00000004002PABPC49983.201Gorilla_gorilla
ENSMAMG00000010025pabpc410097.129ENSHBUG00000020206pabpc410097.129Haplochromis_burtoni
ENSMAMG00000010025pabpc49982.215ENSHGLG00000011162PABPC49983.043Heterocephalus_glaber_female
ENSMAMG00000010025pabpc49982.215ENSHGLG00100001580PABPC49983.043Heterocephalus_glaber_male
ENSMAMG00000010025pabpc410096.172ENSHCOG00000012694pabpc410096.172Hippocampus_comes
ENSMAMG00000010025pabpc49892.231ENSIPUG00000016620pabpc49992.663Ictalurus_punctatus
ENSMAMG00000010025pabpc49984.615ENSSTOG00000010416PABPC49984.330Ictidomys_tridecemlineatus
ENSMAMG00000010025pabpc49980.864ENSJJAG00000007781Pabpc49980.280Jaculus_jaculus
ENSMAMG00000010025pabpc410096.019ENSKMAG00000013597pabpc49996.284Kryptolebias_marmoratus
ENSMAMG00000010025pabpc410096.184ENSLBEG00000013654pabpc49996.184Labrus_bergylta
ENSMAMG00000010025pabpc49986.478ENSLACG00000011907PABPC49986.349Latimeria_chalumnae
ENSMAMG00000010025pabpc49990.866ENSLOCG00000001877pabpc49991.707Lepisosteus_oculatus
ENSMAMG00000010025pabpc49984.776ENSLAFG00000000151PABPC49984.491Loxodonta_africana
ENSMAMG00000010025pabpc49982.059ENSMFAG00000041481PABPC49983.201Macaca_fascicularis
ENSMAMG00000010025pabpc49980.000ENSMMUG00000007497PABPC49979.545Macaca_mulatta
ENSMAMG00000010025pabpc49982.059ENSMNEG00000043054PABPC49983.043Macaca_nemestrina
ENSMAMG00000010025pabpc49982.059ENSMLEG00000040716PABPC49983.201Mandrillus_leucophaeus
ENSMAMG00000010025pabpc410097.129ENSMZEG00005006141pabpc410097.129Maylandia_zebra
ENSMAMG00000010025pabpc49882.939ENSMGAG00000005408PABPC49982.594Meleagris_gallopavo
ENSMAMG00000010025pabpc47579.048ENSMAUG00000001295-9778.095Mesocricetus_auratus
ENSMAMG00000010025pabpc46080.117ENSMAUG00000004089-9680.117Mesocricetus_auratus
ENSMAMG00000010025pabpc47695.946ENSMAUG00000019763-7795.946Mesocricetus_auratus
ENSMAMG00000010025pabpc49874.640ENSMICG00000036729-9974.229Microcebus_murinus
ENSMAMG00000010025pabpc49184.211ENSMICG00000016633-10083.964Microcebus_murinus
ENSMAMG00000010025pabpc410083.758ENSMOCG00000006763Pabpc49883.657Microtus_ochrogaster
ENSMAMG00000010025pabpc410093.301ENSMMOG00000002363pabpc49993.204Mola_mola
ENSMAMG00000010025pabpc49883.386ENSMODG00000017657-9982.748Monodelphis_domestica
ENSMAMG00000010025pabpc46270.667ENSMODG00000018051-9670.667Monodelphis_domestica
ENSMAMG00000010025pabpc410097.933ENSMALG00000011017pabpc410097.933Monopterus_albus
ENSMAMG00000010025pabpc49870.427MGP_CAROLIEiJ_G0024864-9973.036Mus_caroli
ENSMAMG00000010025pabpc49978.947MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSMAMG00000010025pabpc49984.295ENSMUSG00000011257Pabpc410094.643Mus_musculus
ENSMAMG00000010025pabpc49979.394MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSMAMG00000010025pabpc49870.588MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSMAMG00000010025pabpc49846.167ENSMPUG00000006836-10045.545Mustela_putorius_furo
ENSMAMG00000010025pabpc49979.398ENSMPUG00000014414-9979.545Mustela_putorius_furo
ENSMAMG00000010025pabpc49984.615ENSMLUG00000012068PABPC49984.330Myotis_lucifugus
ENSMAMG00000010025pabpc49984.776ENSNGAG00000018292Pabpc49984.491Nannospalax_galili
ENSMAMG00000010025pabpc46398.558ENSNBRG00000009708pabpc49898.558Neolamprologus_brichardi
ENSMAMG00000010025pabpc46898.193ENSNBRG00000010047-7298.193Neolamprologus_brichardi
ENSMAMG00000010025pabpc49982.059ENSNLEG00000011928PABPC49983.201Nomascus_leucogenys
ENSMAMG00000010025pabpc48993.651ENSOPRG00000011984PABPC48693.651Ochotona_princeps
ENSMAMG00000010025pabpc45582.857ENSODEG00000013457-10082.857Octodon_degus
ENSMAMG00000010025pabpc49982.540ENSODEG00000006592-9982.567Octodon_degus
ENSMAMG00000010025pabpc49873.486ENSODEG00000017434-9973.517Octodon_degus
ENSMAMG00000010025pabpc410097.129ENSONIG00000008176pabpc410097.129Oreochromis_niloticus
ENSMAMG00000010025pabpc49985.827ENSOANG00000010001PABPC49985.533Ornithorhynchus_anatinus
ENSMAMG00000010025pabpc49880.315ENSOCUG00000000562PABPC48879.592Oryctolagus_cuniculus
ENSMAMG00000010025pabpc49996.296ENSORLG00000017479pabpc49896.296Oryzias_latipes
ENSMAMG00000010025pabpc49996.296ENSORLG00020018644pabpc49896.296Oryzias_latipes_hni
ENSMAMG00000010025pabpc49996.296ENSORLG00015015042pabpc49896.296Oryzias_latipes_hsok
ENSMAMG00000010025pabpc49995.955ENSOMEG00000014410pabpc49895.955Oryzias_melastigma
ENSMAMG00000010025pabpc49980.982ENSOGAG00000004067PABPC49980.989Otolemur_garnettii
ENSMAMG00000010025pabpc49979.248ENSOARG00000020060PABPC49979.394Ovis_aries
ENSMAMG00000010025pabpc49982.059ENSPPAG00000043625PABPC49983.201Pan_paniscus
ENSMAMG00000010025pabpc49982.059ENSPPRG00000024727PABPC49982.884Panthera_pardus
ENSMAMG00000010025pabpc49982.059ENSPTIG00000005829PABPC49982.884Panthera_tigris_altaica
ENSMAMG00000010025pabpc49982.059ENSPTRG00000000573PABPC49983.201Pan_troglodytes
ENSMAMG00000010025pabpc49982.059ENSPANG00000009484PABPC49983.201Papio_anubis
ENSMAMG00000010025pabpc410090.596ENSPKIG00000025356pabpc49991.415Paramormyrops_kingsleyae
ENSMAMG00000010025pabpc49986.614ENSPSIG00000016892PABPC49986.328Pelodiscus_sinensis
ENSMAMG00000010025pabpc410092.026ENSPMGG00000009073pabpc49992.071Periophthalmus_magnuspinnatus
ENSMAMG00000010025pabpc49979.507ENSPEMG00000024193-9980.000Peromyscus_maniculatus_bairdii
ENSMAMG00000010025pabpc49982.710ENSPEMG00000023569-9983.677Peromyscus_maniculatus_bairdii
ENSMAMG00000010025pabpc49174.869ENSPMAG00000002836pabpc410075.784Petromyzon_marinus
ENSMAMG00000010025pabpc49772.961ENSPMAG00000007885pabpc410073.984Petromyzon_marinus
ENSMAMG00000010025pabpc49886.469ENSPCIG00000020674PABPC49994.175Phascolarctos_cinereus
ENSMAMG00000010025pabpc49995.048ENSPFOG00000002682pabpc49995.793Poecilia_formosa
ENSMAMG00000010025pabpc49995.208ENSPLAG00000010112pabpc49995.955Poecilia_latipinna
ENSMAMG00000010025pabpc49896.104ENSPMEG00000019739pabpc49995.955Poecilia_mexicana
ENSMAMG00000010025pabpc49995.527ENSPREG00000001589pabpc49996.117Poecilia_reticulata
ENSMAMG00000010025pabpc49980.000ENSPPYG00000001506PABPC49979.545Pongo_abelii
ENSMAMG00000010025pabpc49974.887ENSPCAG00000003341PABPC49974.697Procavia_capensis
ENSMAMG00000010025pabpc48487.671ENSPCOG00000025882-9087.671Propithecus_coquereli
ENSMAMG00000010025pabpc49981.931ENSPCOG00000023725-9983.070Propithecus_coquereli
ENSMAMG00000010025pabpc49878.667ENSPVAG00000002187PABPC49978.319Pteropus_vampyrus
ENSMAMG00000010025pabpc410097.289ENSPNYG00000006134pabpc410097.289Pundamilia_nyererei
ENSMAMG00000010025pabpc49993.344ENSPNAG00000024355pabpc49994.212Pygocentrus_nattereri
ENSMAMG00000010025pabpc49979.109ENSRNOG00000028592AABR07035074.19979.193Rattus_norvegicus
ENSMAMG00000010025pabpc49981.260ENSRNOG00000015642Pabpc49981.366Rattus_norvegicus
ENSMAMG00000010025pabpc49982.059ENSRBIG00000039761PABPC49983.201Rhinopithecus_bieti
ENSMAMG00000010025pabpc49982.059ENSRROG00000033355PABPC49983.201Rhinopithecus_roxellana
ENSMAMG00000010025pabpc49982.059ENSSBOG00000026193PABPC49983.201Saimiri_boliviensis_boliviensis
ENSMAMG00000010025pabpc49886.469ENSSHAG00000018139PABPC49985.692Sarcophilus_harrisii
ENSMAMG00000010025pabpc49991.340ENSSFOG00015023514pabpc49991.708Scleropages_formosus
ENSMAMG00000010025pabpc410097.129ENSSMAG00000009007pabpc410097.129Scophthalmus_maximus
ENSMAMG00000010025pabpc410097.608ENSSDUG00000012683pabpc410097.608Seriola_dumerili
ENSMAMG00000010025pabpc410097.608ENSSLDG00000013025pabpc410097.608Seriola_lalandi_dorsalis
ENSMAMG00000010025pabpc49973.083ENSSARG00000000310PABPC49973.182Sorex_araneus
ENSMAMG00000010025pabpc49986.963ENSSPUG00000003204PABPC49986.677Sphenodon_punctatus
ENSMAMG00000010025pabpc410098.246ENSSPAG00000009252pabpc410098.246Stegastes_partitus
ENSMAMG00000010025pabpc48945.293ENSSSCG00000036170-9545.045Sus_scrofa
ENSMAMG00000010025pabpc49982.059ENSSSCG00000003660-9982.884Sus_scrofa
ENSMAMG00000010025pabpc49981.832ENSTGUG00000001266PABPC49981.942Taeniopygia_guttata
ENSMAMG00000010025pabpc410095.534ENSTRUG00000005907pabpc49995.955Takifugu_rubripes
ENSMAMG00000010025pabpc410088.836ENSTNIG00000016902pabpc49988.997Tetraodon_nigroviridis
ENSMAMG00000010025pabpc49868.667ENSTBEG00000009035PABPC49968.571Tupaia_belangeri
ENSMAMG00000010025pabpc49866.431ENSTTRG00000014340PABPC49967.563Tursiops_truncatus
ENSMAMG00000010025pabpc49982.059ENSUAMG00000000303PABPC49982.884Ursus_americanus
ENSMAMG00000010025pabpc49989.116ENSUMAG00000019585PABPC49989.885Ursus_maritimus
ENSMAMG00000010025pabpc47469.912ENSVPAG00000010041PABPC47369.912Vicugna_pacos
ENSMAMG00000010025pabpc49982.059ENSVVUG00000005215PABPC49982.884Vulpes_vulpes
ENSMAMG00000010025pabpc47096.429ENSXETG00000027221-10096.429Xenopus_tropicalis
ENSMAMG00000010025pabpc49982.362ENSXETG00000010946pabpc49982.194Xenopus_tropicalis
ENSMAMG00000010025pabpc49992.527ENSXCOG00000013190pabpc49695.283Xiphophorus_couchianus
ENSMAMG00000010025pabpc49995.527ENSXMAG00000019007pabpc49996.117Xiphophorus_maculatus

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