EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000010272 (Gene tree)
Gene ID: 113130976
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TAR (HIV) RNA binding protein 2
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 10617 bases
Position: chrOOHQ01000082.1:9539342-9549958
Accession: ZDB-GENE-030131-8085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000015153	dsrm	PF00035.26	2e-34	1	2
ENSMAMP00000015153	dsrm	PF00035.26	2e-34	2	2
ENSMAMP00000015168	dsrm	PF00035.26	2.1e-34	1	2
ENSMAMP00000015168	dsrm	PF00035.26	2.1e-34	2	2
ENSMAMP00000015161	dsrm	PF00035.26	4e-34	1	2
ENSMAMP00000015161	dsrm	PF00035.26	4e-34	2	2
ENSMAMP00000015153	DND1_DSRM	PF14709.7	8.6e-12	1	1
ENSMAMP00000015168	DND1_DSRM	PF14709.7	8.9e-12	1	1
ENSMAMP00000015161	DND1_DSRM	PF14709.7	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000015572	-	1050	-	ENSMAMP00000015153	349 (aa)	-	-
ENSMAMT00000015580	-	1350	-	ENSMAMP00000015161	415 (aa)	-	-
ENSMAMT00000015587	-	5514	-	ENSMAMP00000015168	353 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000010272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000010272's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000010272	tarbp2	97	41.279	ENSMAMG00000006591	prkra	91	43.949

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000010272	tarbp2	97	66.189	ENSG00000139546	TARBP2	100	65.507	Homo_sapiens
ENSMAMG00000010272	tarbp2	97	90.643	ENSAPOG00000019892	tarbp2	95	92.966	Acanthochromis_polyacanthus
ENSMAMG00000010272	tarbp2	97	66.762	ENSAMEG00000012601	TARBP2	96	65.527	Ailuropoda_melanoleuca
ENSMAMG00000010272	tarbp2	92	92.547	ENSACIG00000016780	tarbp2	95	92.523	Amphilophus_citrinellus
ENSMAMG00000010272	tarbp2	97	90.643	ENSAOCG00000005201	tarbp2	95	92.355	Amphiprion_ocellaris
ENSMAMG00000010272	tarbp2	97	90.643	ENSAPEG00000008376	tarbp2	95	92.355	Amphiprion_percula
ENSMAMG00000010272	tarbp2	97	90.643	ENSATEG00000025012	tarbp2	95	92.355	Anabas_testudineus
ENSMAMG00000010272	tarbp2	97	69.186	ENSACAG00000001100	TARBP2	95	69.679	Anolis_carolinensis
ENSMAMG00000010272	tarbp2	97	66.189	ENSANAG00000034453	TARBP2	75	88.136	Aotus_nancymaae
ENSMAMG00000010272	tarbp2	97	88.012	ENSACLG00000018569	tarbp2	95	90.520	Astatotilapia_calliptera
ENSMAMG00000010272	tarbp2	97	81.871	ENSAMXG00000016665	tarbp2	95	82.317	Astyanax_mexicanus
ENSMAMG00000010272	tarbp2	97	67.622	ENSBTAG00000000435	TARBP2	96	66.667	Bos_taurus
ENSMAMG00000010272	tarbp2	97	66.476	ENSCJAG00000018668	TARBP2	95	66.379	Callithrix_jacchus
ENSMAMG00000010272	tarbp2	97	66.860	ENSCAFG00000006874	TARBP2	95	70.245	Canis_familiaris
ENSMAMG00000010272	tarbp2	97	66.476	ENSCAFG00020020735	TARBP2	100	65.797	Canis_lupus_dingo
ENSMAMG00000010272	tarbp2	97	64.917	ENSCHIG00000026017	TARBP2	96	64.789	Capra_hircus
ENSMAMG00000010272	tarbp2	97	67.049	ENSTSYG00000035683	TARBP2	75	88.136	Carlito_syrichta
ENSMAMG00000010272	tarbp2	64	69.333	ENSCAPG00000008981	TARBP2	100	69.333	Cavia_aperea
ENSMAMG00000010272	tarbp2	97	66.382	ENSCPOG00000001009	TARBP2	96	66.382	Cavia_porcellus
ENSMAMG00000010272	tarbp2	97	66.189	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSMAMG00000010272	tarbp2	97	65.903	ENSCATG00000026344	TARBP2	75	88.136	Cercocebus_atys
ENSMAMG00000010272	tarbp2	97	66.382	ENSCLAG00000009175	TARBP2	96	65.812	Chinchilla_lanigera
ENSMAMG00000010272	tarbp2	97	65.903	ENSCSAG00000005479	TARBP2	96	64.672	Chlorocebus_sabaeus
ENSMAMG00000010272	tarbp2	97	69.767	ENSCPBG00000000654	TARBP2	100	70.294	Chrysemys_picta_bellii
ENSMAMG00000010272	tarbp2	97	65.903	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSMAMG00000010272	tarbp2	97	66.286	ENSCGRG00001011856	TARBP2	95	66.379	Cricetulus_griseus_chok1gshd
ENSMAMG00000010272	tarbp2	97	66.286	ENSCGRG00000009088	TARBP2	100	66.393	Cricetulus_griseus_crigri
ENSMAMG00000010272	tarbp2	97	86.257	ENSCSEG00000010631	tarbp2	94	89.720	Cynoglossus_semilaevis
ENSMAMG00000010272	tarbp2	97	86.047	ENSCVAG00000009832	tarbp2	95	88.685	Cyprinodon_variegatus
ENSMAMG00000010272	tarbp2	97	79.651	ENSDARG00000070471	tarbp2	95	81.707	Danio_rerio
ENSMAMG00000010272	tarbp2	97	67.049	ENSDNOG00000002144	TARBP2	96	66.097	Dasypus_novemcinctus
ENSMAMG00000010272	tarbp2	85	55.844	ENSDORG00000001390	Tarbp2	91	69.683	Dipodomys_ordii
ENSMAMG00000010272	tarbp2	80	92.593	ENSETEG00000002458	TARBP2	72	91.803	Echinops_telfairi
ENSMAMG00000010272	tarbp2	98	56.647	ENSEBUG00000002377	tarbp2	96	61.587	Eptatretus_burgeri
ENSMAMG00000010272	tarbp2	97	66.762	ENSEASG00005010030	TARBP2	96	65.527	Equus_asinus_asinus
ENSMAMG00000010272	tarbp2	97	67.246	ENSECAG00000011695	TARBP2	95	69.789	Equus_caballus
ENSMAMG00000010272	tarbp2	82	64.407	ENSEEUG00000001128	-	95	63.300	Erinaceus_europaeus
ENSMAMG00000010272	tarbp2	97	82.558	ENSELUG00000010642	tarbp2	95	86.061	Esox_lucius
ENSMAMG00000010272	tarbp2	97	67.049	ENSFCAG00000007757	TARBP2	96	65.812	Felis_catus
ENSMAMG00000010272	tarbp2	97	66.667	ENSFDAG00000011932	TARBP2	100	65.574	Fukomys_damarensis
ENSMAMG00000010272	tarbp2	96	86.686	ENSFHEG00000016118	tarbp2	100	89.506	Fundulus_heteroclitus
ENSMAMG00000010272	tarbp2	97	81.395	ENSGMOG00000001290	tarbp2	95	84.802	Gadus_morhua
ENSMAMG00000010272	tarbp2	64	71.111	ENSGALG00000038939	-	85	71.111	Gallus_gallus
ENSMAMG00000010272	tarbp2	97	86.919	ENSGAFG00000013341	tarbp2	95	88.379	Gambusia_affinis
ENSMAMG00000010272	tarbp2	97	89.826	ENSGACG00000006645	tarbp2	95	90.671	Gasterosteus_aculeatus
ENSMAMG00000010272	tarbp2	97	69.767	ENSGAGG00000021169	TARBP2	97	68.376	Gopherus_agassizii
ENSMAMG00000010272	tarbp2	97	66.189	ENSGGOG00000012637	TARBP2	75	88.136	Gorilla_gorilla
ENSMAMG00000010272	tarbp2	97	87.719	ENSHBUG00000018639	tarbp2	95	90.214	Haplochromis_burtoni
ENSMAMG00000010272	tarbp2	97	66.667	ENSHGLG00000001284	TARBP2	77	91.803	Heterocephalus_glaber_female
ENSMAMG00000010272	tarbp2	97	66.667	ENSHGLG00100011274	TARBP2	77	91.803	Heterocephalus_glaber_male
ENSMAMG00000010272	tarbp2	97	83.333	ENSHCOG00000001027	tarbp2	95	85.627	Hippocampus_comes
ENSMAMG00000010272	tarbp2	97	81.050	ENSIPUG00000023701	tarbp2	94	84.424	Ictalurus_punctatus
ENSMAMG00000010272	tarbp2	97	67.622	ENSSTOG00000003678	TARBP2	100	65.984	Ictidomys_tridecemlineatus
ENSMAMG00000010272	tarbp2	97	89.474	ENSKMAG00000012142	tarbp2	95	90.520	Kryptolebias_marmoratus
ENSMAMG00000010272	tarbp2	97	87.464	ENSLBEG00000015027	tarbp2	96	89.091	Labrus_bergylta
ENSMAMG00000010272	tarbp2	73	89.474	ENSLACG00000007087	TARBP2	76	91.071	Latimeria_chalumnae
ENSMAMG00000010272	tarbp2	97	78.947	ENSLOCG00000005711	tarbp2	95	82.012	Lepisosteus_oculatus
ENSMAMG00000010272	tarbp2	73	62.082	ENSLAFG00000002620	TARBP2	70	91.803	Loxodonta_africana
ENSMAMG00000010272	tarbp2	97	65.903	ENSMFAG00000013567	TARBP2	75	88.136	Macaca_fascicularis
ENSMAMG00000010272	tarbp2	97	66.189	ENSMMUG00000018492	TARBP2	96	64.957	Macaca_mulatta
ENSMAMG00000010272	tarbp2	97	65.903	ENSMNEG00000036477	TARBP2	75	88.136	Macaca_nemestrina
ENSMAMG00000010272	tarbp2	97	65.903	ENSMLEG00000029583	TARBP2	75	88.136	Mandrillus_leucophaeus
ENSMAMG00000010272	tarbp2	97	88.304	ENSMZEG00005006895	tarbp2	95	90.826	Maylandia_zebra
ENSMAMG00000010272	tarbp2	97	65.805	ENSMAUG00000019805	Tarbp2	95	66.092	Mesocricetus_auratus
ENSMAMG00000010272	tarbp2	96	67.826	ENSMICG00000027441	TARBP2	100	67.246	Microcebus_murinus
ENSMAMG00000010272	tarbp2	97	64.525	ENSMOCG00000003691	Tarbp2	96	65.143	Microtus_ochrogaster
ENSMAMG00000010272	tarbp2	96	84.884	ENSMMOG00000010374	tarbp2	100	89.362	Mola_mola
ENSMAMG00000010272	tarbp2	97	88.596	ENSMALG00000009773	tarbp2	95	91.743	Monopterus_albus
ENSMAMG00000010272	tarbp2	97	66.379	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSMAMG00000010272	tarbp2	97	66.379	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSMAMG00000010272	tarbp2	97	66.379	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSMAMG00000010272	tarbp2	97	66.379	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSMAMG00000010272	tarbp2	97	66.952	ENSMPUG00000005944	TARBP2	96	66.000	Mustela_putorius_furo
ENSMAMG00000010272	tarbp2	97	67.049	ENSMLUG00000010035	TARBP2	96	65.812	Myotis_lucifugus
ENSMAMG00000010272	tarbp2	97	66.189	ENSNLEG00000017690	TARBP2	75	88.136	Nomascus_leucogenys
ENSMAMG00000010272	tarbp2	97	67.836	ENSMEUG00000001916	TARBP2	95	71.340	Notamacropus_eugenii
ENSMAMG00000010272	tarbp2	64	70.667	ENSOPRG00000011397	TARBP2	100	70.667	Ochotona_princeps
ENSMAMG00000010272	tarbp2	63	68.860	ENSODEG00000013413	TARBP2	100	67.257	Octodon_degus
ENSMAMG00000010272	tarbp2	98	83.060	ENSONIG00000005115	tarbp2	97	83.288	Oreochromis_niloticus
ENSMAMG00000010272	tarbp2	97	68.000	ENSOCUG00000005700	TARBP2	96	66.667	Oryctolagus_cuniculus
ENSMAMG00000010272	tarbp2	97	86.842	ENSORLG00000005209	tarbp2	95	88.991	Oryzias_latipes
ENSMAMG00000010272	tarbp2	97	86.550	ENSORLG00020017755	tarbp2	95	88.685	Oryzias_latipes_hni
ENSMAMG00000010272	tarbp2	97	86.842	ENSORLG00015013237	tarbp2	95	88.991	Oryzias_latipes_hsok
ENSMAMG00000010272	tarbp2	97	87.427	ENSOMEG00000018860	tarbp2	95	89.297	Oryzias_melastigma
ENSMAMG00000010272	tarbp2	97	67.330	ENSOGAG00000001744	TARBP2	96	66.384	Otolemur_garnettii
ENSMAMG00000010272	tarbp2	97	67.335	ENSOARG00000016437	TARBP2	96	66.382	Ovis_aries
ENSMAMG00000010272	tarbp2	97	66.189	ENSPPAG00000030429	TARBP2	75	88.136	Pan_paniscus
ENSMAMG00000010272	tarbp2	97	67.049	ENSPPRG00000000189	TARBP2	96	65.812	Panthera_pardus
ENSMAMG00000010272	tarbp2	97	68.300	ENSPTIG00000007859	TARBP2	96	66.763	Panthera_tigris_altaica
ENSMAMG00000010272	tarbp2	97	66.189	ENSPTRG00000005020	TARBP2	75	88.136	Pan_troglodytes
ENSMAMG00000010272	tarbp2	97	65.903	ENSPANG00000010689	TARBP2	75	88.136	Papio_anubis
ENSMAMG00000010272	tarbp2	97	81.287	ENSPKIG00000002455	tarbp2	95	79.939	Paramormyrops_kingsleyae
ENSMAMG00000010272	tarbp2	97	86.842	ENSPMGG00000006497	tarbp2	95	87.462	Periophthalmus_magnuspinnatus
ENSMAMG00000010272	tarbp2	97	65.143	ENSPEMG00000014285	Tarbp2	95	65.517	Peromyscus_maniculatus_bairdii
ENSMAMG00000010272	tarbp2	90	63.492	ENSPMAG00000000105	tarbp2	99	63.492	Petromyzon_marinus
ENSMAMG00000010272	tarbp2	97	67.836	ENSPCIG00000006672	TARBP2	87	71.340	Phascolarctos_cinereus
ENSMAMG00000010272	tarbp2	97	88.081	ENSPFOG00000007586	tarbp2	95	89.602	Poecilia_formosa
ENSMAMG00000010272	tarbp2	97	87.500	ENSPLAG00000017659	tarbp2	95	89.297	Poecilia_latipinna
ENSMAMG00000010272	tarbp2	97	88.081	ENSPMEG00000007775	tarbp2	95	89.602	Poecilia_mexicana
ENSMAMG00000010272	tarbp2	97	88.081	ENSPREG00000007815	tarbp2	95	89.602	Poecilia_reticulata
ENSMAMG00000010272	tarbp2	97	62.609	ENSPPYG00000004583	TARBP2	95	66.563	Pongo_abelii
ENSMAMG00000010272	tarbp2	80	62.543	ENSPCAG00000005352	TARBP2	60	70.588	Procavia_capensis
ENSMAMG00000010272	tarbp2	97	67.908	ENSPCOG00000013102	TARBP2	75	88.136	Propithecus_coquereli
ENSMAMG00000010272	tarbp2	97	66.476	ENSPVAG00000012286	TARBP2	96	65.527	Pteropus_vampyrus
ENSMAMG00000010272	tarbp2	97	88.012	ENSPNYG00000014125	tarbp2	95	90.520	Pundamilia_nyererei
ENSMAMG00000010272	tarbp2	97	82.456	ENSPNAG00000011128	tarbp2	95	83.232	Pygocentrus_nattereri
ENSMAMG00000010272	tarbp2	97	66.379	ENSRNOG00000042355	Tarbp2	95	66.092	Rattus_norvegicus
ENSMAMG00000010272	tarbp2	97	66.189	ENSRBIG00000027150	TARBP2	75	88.136	Rhinopithecus_bieti
ENSMAMG00000010272	tarbp2	97	66.189	ENSRROG00000044783	TARBP2	100	66.087	Rhinopithecus_roxellana
ENSMAMG00000010272	tarbp2	97	66.189	ENSSBOG00000027305	TARBP2	75	88.136	Saimiri_boliviensis_boliviensis
ENSMAMG00000010272	tarbp2	97	67.622	ENSSHAG00000007064	TARBP2	100	71.384	Sarcophilus_harrisii
ENSMAMG00000010272	tarbp2	97	82.164	ENSSFOG00015010784	tarbp2	95	80.645	Scleropages_formosus
ENSMAMG00000010272	tarbp2	97	86.782	ENSSMAG00000012769	tarbp2	95	90.090	Scophthalmus_maximus
ENSMAMG00000010272	tarbp2	97	91.228	ENSSDUG00000018818	tarbp2	95	93.272	Seriola_dumerili
ENSMAMG00000010272	tarbp2	97	90.936	ENSSLDG00000001835	tarbp2	96	92.212	Seriola_lalandi_dorsalis
ENSMAMG00000010272	tarbp2	69	80.488	ENSSARG00000001010	TARBP2	67	80.000	Sorex_araneus
ENSMAMG00000010272	tarbp2	61	87.719	ENSSPUG00000005895	TARBP2	66	86.207	Sphenodon_punctatus
ENSMAMG00000010272	tarbp2	97	91.228	ENSSPAG00000022797	tarbp2	95	92.355	Stegastes_partitus
ENSMAMG00000010272	tarbp2	97	66.762	ENSSSCG00000000276	TARBP2	85	91.071	Sus_scrofa
ENSMAMG00000010272	tarbp2	73	52.347	ENSTGUG00000017031	TARBP2	99	54.941	Taeniopygia_guttata
ENSMAMG00000010272	tarbp2	97	88.012	ENSTRUG00000014379	tarbp2	95	89.297	Takifugu_rubripes
ENSMAMG00000010272	tarbp2	97	87.427	ENSTNIG00000007065	tarbp2	95	88.685	Tetraodon_nigroviridis
ENSMAMG00000010272	tarbp2	97	67.335	ENSTTRG00000017177	TARBP2	96	66.382	Tursiops_truncatus
ENSMAMG00000010272	tarbp2	97	67.049	ENSUAMG00000009011	TARBP2	96	65.812	Ursus_americanus
ENSMAMG00000010272	tarbp2	96	67.052	ENSUMAG00000010461	TARBP2	95	66.474	Ursus_maritimus
ENSMAMG00000010272	tarbp2	97	66.476	ENSVVUG00000028150	TARBP2	100	65.797	Vulpes_vulpes
ENSMAMG00000010272	tarbp2	97	70.845	ENSXETG00000012644	tarbp2	95	69.822	Xenopus_tropicalis
ENSMAMG00000010272	tarbp2	97	88.081	ENSXMAG00000017836	tarbp2	95	89.297	Xiphophorus_maculatus