EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000010305 (Gene tree)
Gene ID: 113146284
Gene Symbol: srrm1
Alias: wu:fb34f04|wu:fb38b06|zgc:63802
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 13795 bases
Position: chrOOHQ01000119.1:14392156-14405950
Accession: 113146284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000015180	PWI	PF01480.17	8.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000015599	-	3632	XM_026291856	ENSMAMP00000015180	863 (aa)	XP_026147641	UPI000E4573B5

Gene Model

Click here to download ENSMAMG00000010305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000010305's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000010305	srrm1	60	91.440	ENSAPOG00000001170	srrm1	99	98.718	Acanthochromis_polyacanthus
ENSMAMG00000010305	srrm1	100	84.606	ENSAOCG00000021757	srrm1	100	87.153	Amphiprion_ocellaris
ENSMAMG00000010305	srrm1	100	84.144	ENSAPEG00000018964	srrm1	100	84.028	Amphiprion_percula
ENSMAMG00000010305	srrm1	100	87.601	ENSATEG00000007659	srrm1	100	87.601	Anabas_testudineus
ENSMAMG00000010305	srrm1	100	78.864	ENSCSEG00000000122	srrm1	100	79.432	Cynoglossus_semilaevis
ENSMAMG00000010305	srrm1	58	50.660	ENSDARG00000001244	srrm1	99	97.436	Danio_rerio
ENSMAMG00000010305	srrm1	52	79.505	ENSGMOG00000019099	srrm1	78	74.952	Gadus_morhua
ENSMAMG00000010305	srrm1	60	79.769	ENSGACG00000007266	srrm1	71	97.917	Gasterosteus_aculeatus
ENSMAMG00000010305	srrm1	58	80.400	ENSHBUG00000020364	srrm1	100	79.367	Haplochromis_burtoni
ENSMAMG00000010305	srrm1	58	82.365	ENSLBEG00000013936	srrm1	100	86.590	Labrus_bergylta
ENSMAMG00000010305	srrm1	58	80.200	ENSONIG00000008206	srrm1	94	82.360	Oreochromis_niloticus
ENSMAMG00000010305	srrm1	100	75.779	ENSORLG00015014743	srrm1	100	75.894	Oryzias_latipes_hsok
ENSMAMG00000010305	srrm1	67	77.739	ENSPKIG00000008252	srrm1	62	76.736	Paramormyrops_kingsleyae
ENSMAMG00000010305	srrm1	89	75.513	ENSPMEG00000002603	srrm1	96	73.677	Poecilia_mexicana
ENSMAMG00000010305	srrm1	100	90.730	ENSSDUG00000012967	srrm1	100	90.730	Seriola_dumerili
ENSMAMG00000010305	srrm1	100	89.815	ENSSLDG00000012771	srrm1	100	88.657	Seriola_lalandi_dorsalis
ENSMAMG00000010305	srrm1	100	87.963	ENSSPAG00000009507	srrm1	60	92.278	Stegastes_partitus
ENSMAMG00000010305	srrm1	100	70.346	ENSTRUG00000002519	srrm1	100	75.231	Takifugu_rubripes
ENSMAMG00000010305	srrm1	60	81.310	ENSTNIG00000016909	srrm1	100	73.782	Tetraodon_nigroviridis
ENSMAMG00000010305	srrm1	58	73.360	ENSXMAG00000018863	srrm1	100	77.523	Xiphophorus_maculatus