EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000010385 (Gene tree)
Gene ID: 113141799
Gene Symbol: cpsf6
Alias: wu:fa22f12|zgc:85819
Full Name: cleavage and polyadenylation specific factor 6
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 7812 bases
Position: chrOOHQ01000056.1:9380784-9388595
Accession: 113141799
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000015310	RRM_1	PF00076.22	1.1e-06	1	1
ENSMAMP00000015289	RRM_1	PF00076.22	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000015711	-	1934	-	ENSMAMP00000015289	585 (aa)	XP_026182131	UPI000E465720
ENSMAMT00000015732	-	1738	-	ENSMAMP00000015310	549 (aa)	XP_026182136	UPI000E46472F

Gene Model

Click here to download ENSMAMG00000010385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000010385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000010385	cpsf6	66	73.750	ENSG00000149532	CPSF7	100	49.333	Homo_sapiens
ENSMAMG00000010385	cpsf6	94	81.644	ENSG00000111605	CPSF6	88	80.851	Homo_sapiens
ENSMAMG00000010385	cpsf6	100	92.334	ENSACIG00000018413	cpsf6	100	92.334	Amphilophus_citrinellus
ENSMAMG00000010385	cpsf6	100	97.091	ENSAOCG00000017865	cpsf6	100	97.091	Amphiprion_ocellaris
ENSMAMG00000010385	cpsf6	94	38.219	ENSANAG00000024635	CPSF7	69	50.838	Aotus_nancymaae
ENSMAMG00000010385	cpsf6	95	89.550	ENSACLG00000026325	cpsf6	95	91.712	Astatotilapia_calliptera
ENSMAMG00000010385	cpsf6	95	81.154	ENSAMXG00000016745	CPSF6	75	91.566	Astyanax_mexicanus
ENSMAMG00000010385	cpsf6	95	41.155	ENSBTAG00000015263	CPSF7	71	56.069	Bos_taurus
ENSMAMG00000010385	cpsf6	95	40.968	ENSCJAG00000019282	CPSF7	73	66.667	Callithrix_jacchus
ENSMAMG00000010385	cpsf6	91	81.151	ENSCAFG00000000424	CPSF6	92	80.892	Canis_familiaris
ENSMAMG00000010385	cpsf6	95	41.373	ENSCAFG00000016152	CPSF7	71	56.647	Canis_familiaris
ENSMAMG00000010385	cpsf6	95	41.373	ENSCAFG00020012753	CPSF7	71	56.647	Canis_lupus_dingo
ENSMAMG00000010385	cpsf6	95	41.155	ENSCHIG00000014655	CPSF7	71	56.069	Capra_hircus
ENSMAMG00000010385	cpsf6	91	81.113	ENSTSYG00000008591	CPSF6	89	83.465	Carlito_syrichta
ENSMAMG00000010385	cpsf6	95	41.155	ENSTSYG00000010138	-	71	56.647	Carlito_syrichta
ENSMAMG00000010385	cpsf6	93	47.368	ENSCAPG00000006384	CPSF7	68	56.647	Cavia_aperea
ENSMAMG00000010385	cpsf6	96	47.368	ENSCPOG00000009980	CPSF7	71	56.647	Cavia_porcellus
ENSMAMG00000010385	cpsf6	94	81.644	ENSCCAG00000028149	CPSF6	90	83.616	Cebus_capucinus
ENSMAMG00000010385	cpsf6	95	40.968	ENSCCAG00000032367	CPSF7	71	56.069	Cebus_capucinus
ENSMAMG00000010385	cpsf6	94	81.644	ENSCATG00000039288	CPSF6	90	83.908	Cercocebus_atys
ENSMAMG00000010385	cpsf6	95	40.968	ENSCATG00000042801	CPSF7	73	56.069	Cercocebus_atys
ENSMAMG00000010385	cpsf6	88	42.094	ENSCLAG00000003174	CPSF7	71	56.069	Chinchilla_lanigera
ENSMAMG00000010385	cpsf6	95	36.044	ENSCSAG00000006414	CPSF7	73	56.069	Chlorocebus_sabaeus
ENSMAMG00000010385	cpsf6	91	81.113	ENSCANG00000037294	CPSF6	88	82.745	Colobus_angolensis_palliatus
ENSMAMG00000010385	cpsf6	95	41.341	ENSCGRG00001020382	Cpsf7	71	57.225	Cricetulus_griseus_chok1gshd
ENSMAMG00000010385	cpsf6	96	38.743	ENSCGRG00000017954	Cpsf7	73	57.225	Cricetulus_griseus_crigri
ENSMAMG00000010385	cpsf6	94	94.990	ENSCSEG00000008967	cpsf6	100	96.000	Cynoglossus_semilaevis
ENSMAMG00000010385	cpsf6	52	40.206	ENSCSEG00000001956	CPSF7	75	40.206	Cynoglossus_semilaevis
ENSMAMG00000010385	cpsf6	89	35.135	ENSCVAG00000007392	CPSF7	81	39.153	Cyprinodon_variegatus
ENSMAMG00000010385	cpsf6	94	90.173	ENSCVAG00000014857	cpsf6	95	85.045	Cyprinodon_variegatus
ENSMAMG00000010385	cpsf6	95	41.155	ENSDNOG00000018517	CPSF7	73	67.500	Dasypus_novemcinctus
ENSMAMG00000010385	cpsf6	65	81.567	ENSETEG00000002097	CPSF6	74	83.784	Echinops_telfairi
ENSMAMG00000010385	cpsf6	65	50.259	ENSETEG00000003765	CPSF7	71	56.647	Echinops_telfairi
ENSMAMG00000010385	cpsf6	94	54.631	ENSEBUG00000003540	cpsf6	67	78.571	Eptatretus_burgeri
ENSMAMG00000010385	cpsf6	95	41.155	ENSEASG00005008196	CPSF7	71	56.647	Equus_asinus_asinus
ENSMAMG00000010385	cpsf6	67	75.000	ENSECAG00000018521	CPSF7	74	67.500	Equus_caballus
ENSMAMG00000010385	cpsf6	95	41.373	ENSFCAG00000013677	CPSF7	74	67.500	Felis_catus
ENSMAMG00000010385	cpsf6	71	46.196	ENSFALG00000011927	CPSF7	76	54.335	Ficedula_albicollis
ENSMAMG00000010385	cpsf6	95	40.296	ENSFDAG00000003919	CPSF7	71	56.647	Fukomys_damarensis
ENSMAMG00000010385	cpsf6	95	83.533	ENSFHEG00000019693	cpsf6	95	85.077	Fundulus_heteroclitus
ENSMAMG00000010385	cpsf6	59	98.675	ENSGMOG00000012951	cpsf6	59	98.675	Gadus_morhua
ENSMAMG00000010385	cpsf6	63	52.514	ENSGALG00000040962	CPSF7	63	56.647	Gallus_gallus
ENSMAMG00000010385	cpsf6	94	94.208	ENSGACG00000019685	cpsf6	94	94.595	Gasterosteus_aculeatus
ENSMAMG00000010385	cpsf6	94	82.409	ENSGAGG00000010228	CPSF6	54	74.035	Gopherus_agassizii
ENSMAMG00000010385	cpsf6	82	82.308	ENSGGOG00000008211	CPSF6	90	83.908	Gorilla_gorilla
ENSMAMG00000010385	cpsf6	95	89.730	ENSHBUG00000005998	cpsf6	95	91.892	Haplochromis_burtoni
ENSMAMG00000010385	cpsf6	96	47.368	ENSHGLG00000019090	-	73	56.647	Heterocephalus_glaber_female
ENSMAMG00000010385	cpsf6	96	47.368	ENSHGLG00100013933	-	73	56.647	Heterocephalus_glaber_male
ENSMAMG00000010385	cpsf6	94	87.356	ENSHCOG00000014555	cpsf6	53	86.250	Hippocampus_comes
ENSMAMG00000010385	cpsf6	95	41.155	ENSSTOG00000007708	CPSF7	71	56.647	Ictidomys_tridecemlineatus
ENSMAMG00000010385	cpsf6	68	52.850	ENSJJAG00000019390	Cpsf7	73	56.069	Jaculus_jaculus
ENSMAMG00000010385	cpsf6	95	92.252	ENSKMAG00000014794	cpsf6	95	91.532	Kryptolebias_marmoratus
ENSMAMG00000010385	cpsf6	57	40.278	ENSLBEG00000000947	CPSF7	73	39.306	Labrus_bergylta
ENSMAMG00000010385	cpsf6	100	95.447	ENSLBEG00000015762	cpsf6	100	95.447	Labrus_bergylta
ENSMAMG00000010385	cpsf6	76	44.304	ENSLACG00000005542	CPSF7	70	43.671	Latimeria_chalumnae
ENSMAMG00000010385	cpsf6	66	90.419	ENSLOCG00000016190	cpsf6	60	91.566	Lepisosteus_oculatus
ENSMAMG00000010385	cpsf6	95	41.341	ENSLAFG00000032084	CPSF7	71	57.225	Loxodonta_africana
ENSMAMG00000010385	cpsf6	94	81.644	ENSMFAG00000045318	CPSF6	90	83.908	Macaca_fascicularis
ENSMAMG00000010385	cpsf6	95	40.968	ENSMFAG00000001401	CPSF7	71	56.069	Macaca_fascicularis
ENSMAMG00000010385	cpsf6	95	40.968	ENSMMUG00000015280	CPSF7	73	56.069	Macaca_mulatta
ENSMAMG00000010385	cpsf6	93	39.163	ENSMNEG00000029585	CPSF7	73	56.069	Macaca_nemestrina
ENSMAMG00000010385	cpsf6	94	81.644	ENSMNEG00000036311	CPSF6	90	83.908	Macaca_nemestrina
ENSMAMG00000010385	cpsf6	91	81.113	ENSMLEG00000003957	CPSF6	88	82.745	Mandrillus_leucophaeus
ENSMAMG00000010385	cpsf6	95	40.968	ENSMLEG00000031269	CPSF7	69	56.069	Mandrillus_leucophaeus
ENSMAMG00000010385	cpsf6	95	89.730	ENSMZEG00005007975	cpsf6	95	91.892	Maylandia_zebra
ENSMAMG00000010385	cpsf6	95	43.580	ENSMGAG00000004876	CPSF7	62	58.683	Meleagris_gallopavo
ENSMAMG00000010385	cpsf6	95	41.155	ENSMAUG00000013020	Cpsf7	71	56.647	Mesocricetus_auratus
ENSMAMG00000010385	cpsf6	82	83.784	ENSMICG00000007385	-	90	83.908	Microcebus_murinus
ENSMAMG00000010385	cpsf6	95	41.155	ENSMICG00000013788	CPSF7	71	56.647	Microcebus_murinus
ENSMAMG00000010385	cpsf6	95	41.155	ENSMOCG00000000072	Cpsf7	71	56.647	Microtus_ochrogaster
ENSMAMG00000010385	cpsf6	65	51.531	ENSMODG00000020364	CPSF7	72	56.818	Monodelphis_domestica
ENSMAMG00000010385	cpsf6	82	98.661	ENSMALG00000014908	cpsf6	89	98.661	Monopterus_albus
ENSMAMG00000010385	cpsf6	95	41.155	MGP_CAROLIEiJ_G0022690	Cpsf7	71	56.647	Mus_caroli
ENSMAMG00000010385	cpsf6	95	41.155	ENSMUSG00000034820	Cpsf7	71	56.647	Mus_musculus
ENSMAMG00000010385	cpsf6	95	41.155	MGP_PahariEiJ_G0014184	Cpsf7	71	56.647	Mus_pahari
ENSMAMG00000010385	cpsf6	95	41.155	MGP_SPRETEiJ_G0023604	Cpsf7	71	56.647	Mus_spretus
ENSMAMG00000010385	cpsf6	94	39.623	ENSMPUG00000014163	CPSF7	68	55.491	Mustela_putorius_furo
ENSMAMG00000010385	cpsf6	68	52.850	ENSMLUG00000013278	CPSF7	73	56.647	Myotis_lucifugus
ENSMAMG00000010385	cpsf6	63	89.130	ENSMLUG00000028728	-	85	79.459	Myotis_lucifugus
ENSMAMG00000010385	cpsf6	69	78.488	ENSMLUG00000023960	-	71	77.273	Myotis_lucifugus
ENSMAMG00000010385	cpsf6	95	41.155	ENSNGAG00000005031	Cpsf7	71	56.647	Nannospalax_galili
ENSMAMG00000010385	cpsf6	100	96.364	ENSNBRG00000004089	cpsf6	100	96.364	Neolamprologus_brichardi
ENSMAMG00000010385	cpsf6	94	81.644	ENSNLEG00000003798	CPSF6	90	83.908	Nomascus_leucogenys
ENSMAMG00000010385	cpsf6	95	40.968	ENSNLEG00000002529	CPSF7	65	56.069	Nomascus_leucogenys
ENSMAMG00000010385	cpsf6	65	53.886	ENSMEUG00000002261	CPSF7	71	57.803	Notamacropus_eugenii
ENSMAMG00000010385	cpsf6	62	87.952	ENSODEG00000004418	-	78	89.157	Octodon_degus
ENSMAMG00000010385	cpsf6	97	44.103	ENSODEG00000002610	CPSF7	71	56.250	Octodon_degus
ENSMAMG00000010385	cpsf6	95	87.207	ENSONIG00000011702	cpsf6	95	90.270	Oreochromis_niloticus
ENSMAMG00000010385	cpsf6	96	47.027	ENSOCUG00000024726	CPSF7	71	56.069	Oryctolagus_cuniculus
ENSMAMG00000010385	cpsf6	68	35.345	ENSORLG00000006495	CPSF7	72	38.857	Oryzias_latipes
ENSMAMG00000010385	cpsf6	68	35.345	ENSORLG00020012657	CPSF7	72	38.857	Oryzias_latipes_hni
ENSMAMG00000010385	cpsf6	68	35.345	ENSORLG00015011091	CPSF7	72	38.857	Oryzias_latipes_hsok
ENSMAMG00000010385	cpsf6	68	36.207	ENSOMEG00000000539	CPSF7	58	39.884	Oryzias_melastigma
ENSMAMG00000010385	cpsf6	95	41.155	ENSOGAG00000027958	CPSF7	66	56.647	Otolemur_garnettii
ENSMAMG00000010385	cpsf6	95	41.166	ENSOARG00000012937	CPSF7	64	56.069	Ovis_aries
ENSMAMG00000010385	cpsf6	95	40.968	ENSPPAG00000028232	CPSF7	69	56.069	Pan_paniscus
ENSMAMG00000010385	cpsf6	95	39.518	ENSPPRG00000008538	CPSF7	71	56.647	Panthera_pardus
ENSMAMG00000010385	cpsf6	95	41.373	ENSPTIG00000021699	CPSF7	71	56.647	Panthera_tigris_altaica
ENSMAMG00000010385	cpsf6	85	80.892	ENSPTIG00000004079	CPSF6	51	83.465	Panthera_tigris_altaica
ENSMAMG00000010385	cpsf6	82	82.308	ENSPTRG00000005205	CPSF6	90	83.908	Pan_troglodytes
ENSMAMG00000010385	cpsf6	95	40.968	ENSPTRG00000003742	CPSF7	71	56.069	Pan_troglodytes
ENSMAMG00000010385	cpsf6	95	40.968	ENSPANG00000006037	CPSF7	67	56.069	Papio_anubis
ENSMAMG00000010385	cpsf6	94	81.644	ENSPANG00000011641	CPSF6	90	83.908	Papio_anubis
ENSMAMG00000010385	cpsf6	64	46.067	ENSPKIG00000018054	CPSF7	65	45.342	Paramormyrops_kingsleyae
ENSMAMG00000010385	cpsf6	52	89.825	ENSPKIG00000022613	CPSF6	52	89.825	Paramormyrops_kingsleyae
ENSMAMG00000010385	cpsf6	95	41.155	ENSPEMG00000012648	Cpsf7	73	56.647	Peromyscus_maniculatus_bairdii
ENSMAMG00000010385	cpsf6	50	42.424	ENSPMAG00000008077	-	63	50.276	Petromyzon_marinus
ENSMAMG00000010385	cpsf6	65	51.531	ENSPCIG00000002551	CPSF7	84	53.631	Phascolarctos_cinereus
ENSMAMG00000010385	cpsf6	83	94.271	ENSPFOG00000006990	cpsf6	91	94.595	Poecilia_formosa
ENSMAMG00000010385	cpsf6	94	92.293	ENSPLAG00000005715	cpsf6	95	87.027	Poecilia_latipinna
ENSMAMG00000010385	cpsf6	94	92.293	ENSPMEG00000001353	cpsf6	95	87.027	Poecilia_mexicana
ENSMAMG00000010385	cpsf6	95	90.991	ENSPREG00000004417	cpsf6	95	87.027	Poecilia_reticulata
ENSMAMG00000010385	cpsf6	95	40.968	ENSPPYG00000003188	CPSF7	71	56.069	Pongo_abelii
ENSMAMG00000010385	cpsf6	95	41.155	ENSPCOG00000011976	CPSF7	71	56.647	Propithecus_coquereli
ENSMAMG00000010385	cpsf6	82	82.239	ENSPCOG00000024384	CPSF6	90	83.616	Propithecus_coquereli
ENSMAMG00000010385	cpsf6	95	40.968	ENSPVAG00000010675	CPSF7	71	56.647	Pteropus_vampyrus
ENSMAMG00000010385	cpsf6	95	89.910	ENSPNYG00000020315	cpsf6	95	92.072	Pundamilia_nyererei
ENSMAMG00000010385	cpsf6	59	46.104	ENSPNAG00000015073	CPSF7	67	45.455	Pygocentrus_nattereri
ENSMAMG00000010385	cpsf6	68	52.850	ENSRNOG00000020668	Cpsf7	73	56.647	Rattus_norvegicus
ENSMAMG00000010385	cpsf6	82	82.308	ENSRBIG00000042827	CPSF6	90	83.908	Rhinopithecus_bieti
ENSMAMG00000010385	cpsf6	95	40.968	ENSRBIG00000031429	CPSF7	74	66.667	Rhinopithecus_bieti
ENSMAMG00000010385	cpsf6	95	40.968	ENSRROG00000045009	CPSF7	71	56.069	Rhinopithecus_roxellana
ENSMAMG00000010385	cpsf6	94	81.644	ENSRROG00000042758	CPSF6	90	83.908	Rhinopithecus_roxellana
ENSMAMG00000010385	cpsf6	85	80.892	ENSSBOG00000010652	CPSF6	89	82.745	Saimiri_boliviensis_boliviensis
ENSMAMG00000010385	cpsf6	95	40.968	ENSSBOG00000018431	CPSF7	71	56.069	Saimiri_boliviensis_boliviensis
ENSMAMG00000010385	cpsf6	62	53.886	ENSSHAG00000011964	CPSF7	68	57.803	Sarcophilus_harrisii
ENSMAMG00000010385	cpsf6	62	42.222	ENSSFOG00015010288	cpsf7	73	41.379	Scleropages_formosus
ENSMAMG00000010385	cpsf6	100	96.068	ENSSMAG00000000471	cpsf6	100	96.068	Scophthalmus_maximus
ENSMAMG00000010385	cpsf6	100	98.725	ENSSDUG00000005024	cpsf6	100	98.725	Seriola_dumerili
ENSMAMG00000010385	cpsf6	100	98.725	ENSSLDG00000009042	cpsf6	100	98.725	Seriola_lalandi_dorsalis
ENSMAMG00000010385	cpsf6	85	85.433	ENSSARG00000006743	CPSF6	74	86.957	Sorex_araneus
ENSMAMG00000010385	cpsf6	65	53.333	ENSSPUG00000019344	CPSF7	73	57.803	Sphenodon_punctatus
ENSMAMG00000010385	cpsf6	100	97.455	ENSSPAG00000013906	cpsf6	100	97.455	Stegastes_partitus
ENSMAMG00000010385	cpsf6	95	41.155	ENSSSCG00000013083	CPSF7	73	67.500	Sus_scrofa
ENSMAMG00000010385	cpsf6	78	49.438	ENSTGUG00000006513	CPSF7	74	53.763	Taeniopygia_guttata
ENSMAMG00000010385	cpsf6	94	91.892	ENSTRUG00000016461	cpsf6	94	90.347	Takifugu_rubripes
ENSMAMG00000010385	cpsf6	94	92.857	ENSTNIG00000007576	cpsf6	94	92.857	Tetraodon_nigroviridis
ENSMAMG00000010385	cpsf6	92	35.429	ENSTTRG00000011085	CPSF7	68	56.647	Tursiops_truncatus
ENSMAMG00000010385	cpsf6	85	80.892	ENSUAMG00000023492	CPSF6	51	83.465	Ursus_americanus
ENSMAMG00000010385	cpsf6	95	41.373	ENSUAMG00000017809	CPSF7	71	56.647	Ursus_americanus
ENSMAMG00000010385	cpsf6	85	80.892	ENSUMAG00000020779	CPSF6	65	90.909	Ursus_maritimus
ENSMAMG00000010385	cpsf6	68	52.850	ENSUMAG00000011825	CPSF7	73	56.647	Ursus_maritimus
ENSMAMG00000010385	cpsf6	95	41.155	ENSVVUG00000004939	CPSF7	73	67.500	Vulpes_vulpes
ENSMAMG00000010385	cpsf6	97	41.544	ENSXETG00000006715	cpsf7	65	51.176	Xenopus_tropicalis
ENSMAMG00000010385	cpsf6	94	91.908	ENSXCOG00000013423	cpsf6	50	90.476	Xiphophorus_couchianus
ENSMAMG00000010385	cpsf6	95	90.811	ENSXMAG00000003459	cpsf6	95	86.847	Xiphophorus_maculatus