EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAMG00000010394 (Gene tree)
Gene ID
113121693
Gene Symbol
puf60b
Alias
fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Mastacembelus_armatus
Status
putative
Strand
Plus strand
Length
43875 bases
Position
chrOOHQ01000089.1:11223193-11267067
Accession
113121440
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAMP00000015388RRM_1PF00076.221.8e-4412
ENSMAMP00000015388RRM_1PF00076.221.8e-4422
ENSMAMP00000015363RRM_1PF00076.221.9e-4412
ENSMAMP00000015363RRM_1PF00076.221.9e-4422
ENSMAMP00000015375RRM_1PF00076.222.1e-4412
ENSMAMP00000015375RRM_1PF00076.222.1e-4422
ENSMAMP00000015346RRM_1PF00076.222.4e-4412
ENSMAMP00000015346RRM_1PF00076.222.4e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAMT00000015812-3266-ENSMAMP00000015388523 (aa)--
ENSMAMT00000015786-3414-ENSMAMP00000015363527 (aa)XP_026147725UPI000E4659F3
ENSMAMT00000015797-3317-ENSMAMP00000015375540 (aa)--
ENSMAMT00000015716-3509XM_026292399ENSMAMP00000015294505 (aa)XP_026148184UPI000E45544A
ENSMAMT00000015768-1671XM_026291941ENSMAMP00000015346556 (aa)XP_026147726-
Gene Model
Click here to download ENSMAMG00000010394's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000010394's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAMG00000010394puf60b5237.255ENSMAMG00000020158-6437.255
ENSMAMG00000010394puf60b10080.340ENSMAMG00000019476-9982.950
ENSMAMG00000010394puf60b5535.294ENSMAMG00000019817u2af2a6637.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAMG00000010394puf60b10083.551ENSG00000179950PUF6010085.797Homo_sapiens
ENSMAMG00000010394puf60b10094.877ENSAPOG00000001713puf60b9997.303Acanthochromis_polyacanthus
ENSMAMG00000010394puf60b10081.682ENSAMEG00000006406PUF609482.707Ailuropoda_melanoleuca
ENSMAMG00000010394puf60b10093.928ENSACIG00000021705puf60b10096.491Amphilophus_citrinellus
ENSMAMG00000010394puf60b10075.568ENSACIG00000003263-9977.369Amphilophus_citrinellus
ENSMAMG00000010394puf60b10094.877ENSAOCG00000005395puf60b10097.466Amphiprion_ocellaris
ENSMAMG00000010394puf60b10080.682ENSAOCG00000015558-9983.109Amphiprion_ocellaris
ENSMAMG00000010394puf60b9874.854ENSAPEG00000001836-9975.581Amphiprion_percula
ENSMAMG00000010394puf60b10091.396ENSAPEG00000011923puf60b10091.396Amphiprion_percula
ENSMAMG00000010394puf60b10079.962ENSATEG00000006303-9981.992Anabas_testudineus
ENSMAMG00000010394puf60b10095.066ENSATEG00000001730puf60b9997.688Anabas_testudineus
ENSMAMG00000010394puf60b10084.299ENSAPLG00000010150PUF6010085.958Anas_platyrhynchos
ENSMAMG00000010394puf60b10083.178ENSACAG00000001645PUF609784.586Anolis_carolinensis
ENSMAMG00000010394puf60b10083.364ENSANAG00000018626PUF6010085.605Aotus_nancymaae
ENSMAMG00000010394puf60b10093.928ENSACLG00000004462puf60b10096.491Astatotilapia_calliptera
ENSMAMG00000010394puf60b10083.488ENSAMXG00000036570puf60a10083.824Astyanax_mexicanus
ENSMAMG00000010394puf60b10077.306ENSAMXG00000041030puf60b10079.886Astyanax_mexicanus
ENSMAMG00000010394puf60b10083.551ENSBTAG00000037493PUF609984.848Bos_taurus
ENSMAMG00000010394puf60b9346.400WBGene00004389rnp-68852.303Caenorhabditis_elegans
ENSMAMG00000010394puf60b10083.551ENSCJAG00000021485PUF609885.009Callithrix_jacchus
ENSMAMG00000010394puf60b10083.364ENSCAFG00000001400PUF609484.586Canis_familiaris
ENSMAMG00000010394puf60b10083.738ENSCAFG00020018754PUF609885.199Canis_lupus_dingo
ENSMAMG00000010394puf60b10083.551ENSCHIG00000001618PUF608884.774Capra_hircus
ENSMAMG00000010394puf60b10083.738ENSTSYG00000011912PUF6010085.988Carlito_syrichta
ENSMAMG00000010394puf60b10079.221ENSCPOG00000014613PUF609580.224Cavia_porcellus
ENSMAMG00000010394puf60b10083.738ENSCCAG00000007744PUF609885.199Cebus_capucinus
ENSMAMG00000010394puf60b10083.551ENSCATG00000035405PUF609885.009Cercocebus_atys
ENSMAMG00000010394puf60b10083.925ENSCLAG00000009154PUF609385.150Chinchilla_lanigera
ENSMAMG00000010394puf60b10083.551ENSCSAG00000008878PUF6010085.797Chlorocebus_sabaeus
ENSMAMG00000010394puf60b10083.925ENSCPBG00000005595PUF609885.227Chrysemys_picta_bellii
ENSMAMG00000010394puf60b6558.261ENSCING00000002156-9558.286Ciona_intestinalis
ENSMAMG00000010394puf60b9848.190ENSCING00000008436-9847.538Ciona_intestinalis
ENSMAMG00000010394puf60b9853.645ENSCSAVG00000001385-9954.728Ciona_savignyi
ENSMAMG00000010394puf60b9047.316ENSCSAVG00000004765-9748.111Ciona_savignyi
ENSMAMG00000010394puf60b8182.569ENSCANG00000041843PUF6010085.308Colobus_angolensis_palliatus
ENSMAMG00000010394puf60b10084.112ENSCGRG00001017442Puf609385.338Cricetulus_griseus_chok1gshd
ENSMAMG00000010394puf60b10084.112ENSCGRG00000003717Puf609485.206Cricetulus_griseus_crigri
ENSMAMG00000010394puf60b9975.665ENSCSEG00000014845-9176.236Cynoglossus_semilaevis
ENSMAMG00000010394puf60b10094.687ENSCSEG00000019887puf60b9396.923Cynoglossus_semilaevis
ENSMAMG00000010394puf60b10092.979ENSCVAG00000009386puf60b10095.517Cyprinodon_variegatus
ENSMAMG00000010394puf60b9179.461ENSCVAG00000001560-9881.197Cyprinodon_variegatus
ENSMAMG00000010394puf60b10084.428ENSDARG00000032175puf60a9991.915Danio_rerio
ENSMAMG00000010394puf60b10078.108ENSDARG00000001241puf60b9995.238Danio_rerio
ENSMAMG00000010394puf60b9969.245ENSDNOG00000043278PUF609469.216Dasypus_novemcinctus
ENSMAMG00000010394puf60b10084.112ENSDORG00000004585Puf609685.338Dipodomys_ordii
ENSMAMG00000010394puf60b8066.300FBgn0028577hfp9949.541Drosophila_melanogaster
ENSMAMG00000010394puf60b9866.731ENSEBUG00000005470-9466.294Eptatretus_burgeri
ENSMAMG00000010394puf60b10059.191ENSEBUG00000014291puf60b8561.301Eptatretus_burgeri
ENSMAMG00000010394puf60b10083.738ENSEASG00005009695PUF609885.199Equus_asinus_asinus
ENSMAMG00000010394puf60b10083.738ENSECAG00000024681PUF609785.199Equus_caballus
ENSMAMG00000010394puf60b10085.876ENSELUG00000018443-9987.786Esox_lucius
ENSMAMG00000010394puf60b10087.132ENSELUG00000006507puf60b9987.500Esox_lucius
ENSMAMG00000010394puf60b10083.551ENSFCAG00000001045PUF6010085.797Felis_catus
ENSMAMG00000010394puf60b10074.766ENSFALG00000001136PUF609876.660Ficedula_albicollis
ENSMAMG00000010394puf60b10083.738ENSFDAG00000017177PUF609385.150Fukomys_damarensis
ENSMAMG00000010394puf60b10093.738ENSFHEG00000020046puf60b10096.296Fundulus_heteroclitus
ENSMAMG00000010394puf60b9680.000ENSFHEG00000021687PUF6010082.988Fundulus_heteroclitus
ENSMAMG00000010394puf60b10080.075ENSGMOG00000006392puf60b10081.679Gadus_morhua
ENSMAMG00000010394puf60b6785.714ENSGALG00000039901PUF609390.237Gallus_gallus
ENSMAMG00000010394puf60b10093.548ENSGAFG00000021040puf60b10096.101Gambusia_affinis
ENSMAMG00000010394puf60b10077.883ENSGAFG00000004334-9981.314Gambusia_affinis
ENSMAMG00000010394puf60b10081.025ENSGACG00000004717puf60b9883.430Gasterosteus_aculeatus
ENSMAMG00000010394puf60b10070.265ENSGACG00000001484-10071.595Gasterosteus_aculeatus
ENSMAMG00000010394puf60b10083.925ENSGAGG00000013289PUF609285.227Gopherus_agassizii
ENSMAMG00000010394puf60b10083.551ENSGGOG00000004646PUF609885.009Gorilla_gorilla
ENSMAMG00000010394puf60b10093.928ENSHBUG00000015118puf60b10096.491Haplochromis_burtoni
ENSMAMG00000010394puf60b10081.061ENSHBUG00000009634-9982.917Haplochromis_burtoni
ENSMAMG00000010394puf60b10083.738ENSHGLG00000006111PUF609385.150Heterocephalus_glaber_female
ENSMAMG00000010394puf60b10083.738ENSHGLG00100012362PUF609385.150Heterocephalus_glaber_male
ENSMAMG00000010394puf60b9866.923ENSHCOG00000000378-9966.478Hippocampus_comes
ENSMAMG00000010394puf60b10095.301ENSHCOG00000015541puf60b9995.301Hippocampus_comes
ENSMAMG00000010394puf60b10082.243ENSIPUG00000002453puf60a9984.261Ictalurus_punctatus
ENSMAMG00000010394puf60b10078.967ENSIPUG00000004660puf60b9980.880Ictalurus_punctatus
ENSMAMG00000010394puf60b10083.925ENSSTOG00000025037PUF609485.150Ictidomys_tridecemlineatus
ENSMAMG00000010394puf60b10084.112ENSJJAG00000001076Puf609485.338Jaculus_jaculus
ENSMAMG00000010394puf60b10093.738ENSKMAG00000016745puf60b10096.296Kryptolebias_marmoratus
ENSMAMG00000010394puf60b10076.075ENSKMAG00000010106-10077.735Kryptolebias_marmoratus
ENSMAMG00000010394puf60b10095.256ENSLBEG00000012505puf60b9995.256Labrus_bergylta
ENSMAMG00000010394puf60b7277.604ENSLACG00000005456PUF609980.874Latimeria_chalumnae
ENSMAMG00000010394puf60b10086.200ENSLOCG00000010106puf60b9988.123Lepisosteus_oculatus
ENSMAMG00000010394puf60b10082.804ENSLAFG00000022929PUF609584.211Loxodonta_africana
ENSMAMG00000010394puf60b10083.551ENSMFAG00000043373PUF609984.848Macaca_fascicularis
ENSMAMG00000010394puf60b10083.551ENSMMUG00000013558PUF609885.009Macaca_mulatta
ENSMAMG00000010394puf60b10083.551ENSMNEG00000031099PUF609885.009Macaca_nemestrina
ENSMAMG00000010394puf60b10083.551ENSMLEG00000040009PUF6010085.797Mandrillus_leucophaeus
ENSMAMG00000010394puf60b10081.061ENSMZEG00005019425-9982.917Maylandia_zebra
ENSMAMG00000010394puf60b10093.928ENSMZEG00005018515puf60b10096.491Maylandia_zebra
ENSMAMG00000010394puf60b10084.299ENSMGAG00000013070PUF609589.535Meleagris_gallopavo
ENSMAMG00000010394puf60b6986.364ENSMAUG00000014267-9188.140Mesocricetus_auratus
ENSMAMG00000010394puf60b9667.375ENSMAUG00000018549-9569.721Mesocricetus_auratus
ENSMAMG00000010394puf60b10083.738ENSMICG00000012226PUF609985.038Microcebus_murinus
ENSMAMG00000010394puf60b10084.112ENSMOCG00000018780Puf609485.338Microtus_ochrogaster
ENSMAMG00000010394puf60b10094.687ENSMMOG00000004217puf60b10097.271Mola_mola
ENSMAMG00000010394puf60b10072.762ENSMMOG00000018059-9975.281Mola_mola
ENSMAMG00000010394puf60b10083.551ENSMODG00000009161PUF609584.774Monodelphis_domestica
ENSMAMG00000010394puf60b10089.753ENSMALG00000006797puf60b9990.173Monopterus_albus
ENSMAMG00000010394puf60b10079.356ENSMALG00000000200-9981.574Monopterus_albus
ENSMAMG00000010394puf60b10084.299MGP_CAROLIEiJ_G0019910Puf609385.714Mus_caroli
ENSMAMG00000010394puf60b10084.299ENSMUSG00000002524Puf609385.714Mus_musculus
ENSMAMG00000010394puf60b10084.299MGP_PahariEiJ_G0019920Puf609385.714Mus_pahari
ENSMAMG00000010394puf60b10084.299MGP_SPRETEiJ_G0020812Puf609385.714Mus_spretus
ENSMAMG00000010394puf60b10083.551ENSMPUG00000008137PUF609384.774Mustela_putorius_furo
ENSMAMG00000010394puf60b9978.828ENSMLUG00000013032-9978.828Myotis_lucifugus
ENSMAMG00000010394puf60b10083.364ENSMLUG00000000238-9484.586Myotis_lucifugus
ENSMAMG00000010394puf60b10084.112ENSNGAG00000000712Puf6010086.372Nannospalax_galili
ENSMAMG00000010394puf60b10080.682ENSNBRG00000017223-9982.534Neolamprologus_brichardi
ENSMAMG00000010394puf60b8395.444ENSNBRG00000013047puf60b9795.444Neolamprologus_brichardi
ENSMAMG00000010394puf60b10083.551ENSNLEG00000002156PUF609885.009Nomascus_leucogenys
ENSMAMG00000010394puf60b7093.502ENSOPRG00000002147PUF607293.502Ochotona_princeps
ENSMAMG00000010394puf60b7286.441ENSODEG00000014024-9188.319Octodon_degus
ENSMAMG00000010394puf60b9861.390ENSODEG00000015513-9860.681Octodon_degus
ENSMAMG00000010394puf60b10080.871ENSONIG00000014030-9882.885Oreochromis_niloticus
ENSMAMG00000010394puf60b10093.928ENSONIG00000006247puf60b9896.532Oreochromis_niloticus
ENSMAMG00000010394puf60b9769.844ENSOANG00000006962PUF609870.949Ornithorhynchus_anatinus
ENSMAMG00000010394puf60b9978.947ENSORLG00000028655-9980.695Oryzias_latipes
ENSMAMG00000010394puf60b10093.169ENSORLG00000012279puf60b10095.712Oryzias_latipes
ENSMAMG00000010394puf60b10093.169ENSORLG00020007333puf6010095.712Oryzias_latipes_hni
ENSMAMG00000010394puf60b9979.545ENSORLG00020018144-9980.998Oryzias_latipes_hni
ENSMAMG00000010394puf60b9979.356ENSORLG00015016833-9881.118Oryzias_latipes_hsok
ENSMAMG00000010394puf60b10092.439ENSORLG00015007718puf60b10095.340Oryzias_latipes_hsok
ENSMAMG00000010394puf60b9979.735ENSOMEG00000022185-9981.574Oryzias_melastigma
ENSMAMG00000010394puf60b10095.066ENSOMEG00000001643puf60b9895.066Oryzias_melastigma
ENSMAMG00000010394puf60b10083.925ENSOGAG00000006259PUF609485.150Otolemur_garnettii
ENSMAMG00000010394puf60b9981.041ENSOARG00000016235PUF609883.206Ovis_aries
ENSMAMG00000010394puf60b10083.551ENSPPAG00000029933PUF609984.270Pan_paniscus
ENSMAMG00000010394puf60b10083.551ENSPPRG00000003257PUF6010085.797Panthera_pardus
ENSMAMG00000010394puf60b10081.308ENSPTIG00000009795PUF609982.453Panthera_tigris_altaica
ENSMAMG00000010394puf60b10083.551ENSPTRG00000020670PUF609984.270Pan_troglodytes
ENSMAMG00000010394puf60b10083.551ENSPTRG00000043963-9885.009Pan_troglodytes
ENSMAMG00000010394puf60b10083.551ENSPANG00000021936PUF609885.009Papio_anubis
ENSMAMG00000010394puf60b10087.097ENSPKIG00000012204puf60b10090.058Paramormyrops_kingsleyae
ENSMAMG00000010394puf60b10086.817ENSPKIG00000004295puf60a9991.916Paramormyrops_kingsleyae
ENSMAMG00000010394puf60b10083.738ENSPSIG00000004679PUF609985.389Pelodiscus_sinensis
ENSMAMG00000010394puf60b10092.264ENSPMGG00000013444puf60b10094.015Periophthalmus_magnuspinnatus
ENSMAMG00000010394puf60b10084.112ENSPEMG00000008820Puf609485.338Peromyscus_maniculatus_bairdii
ENSMAMG00000010394puf60b10083.925ENSPCIG00000020270PUF609985.524Phascolarctos_cinereus
ENSMAMG00000010394puf60b10093.738ENSPFOG00000019217puf60b9993.605Poecilia_formosa
ENSMAMG00000010394puf60b10079.395ENSPFOG00000011118-9981.418Poecilia_formosa
ENSMAMG00000010394puf60b10079.584ENSPLAG00000017025-9181.226Poecilia_latipinna
ENSMAMG00000010394puf60b10093.738ENSPLAG00000010754puf60b10096.296Poecilia_latipinna
ENSMAMG00000010394puf60b10093.738ENSPMEG00000000838puf60b10096.296Poecilia_mexicana
ENSMAMG00000010394puf60b10079.584ENSPMEG00000009767-9181.609Poecilia_mexicana
ENSMAMG00000010394puf60b10096.015ENSPREG00000005440puf60b9896.015Poecilia_reticulata
ENSMAMG00000010394puf60b8180.963ENSPPYG00000018951-9583.649Pongo_abelii
ENSMAMG00000010394puf60b8182.569ENSPCAG00000014837PUF6010085.308Procavia_capensis
ENSMAMG00000010394puf60b10083.551ENSPCOG00000027981PUF609984.848Propithecus_coquereli
ENSMAMG00000010394puf60b10094.937ENSPVAG00000016167PUF608194.937Pteropus_vampyrus
ENSMAMG00000010394puf60b10081.061ENSPNYG00000004273-9982.917Pundamilia_nyererei
ENSMAMG00000010394puf60b10093.928ENSPNYG00000002556puf60b10096.491Pundamilia_nyererei
ENSMAMG00000010394puf60b9884.200ENSPNAG00000019909puf60a9984.971Pygocentrus_nattereri
ENSMAMG00000010394puf60b9978.269ENSPNAG00000019415puf60b9177.885Pygocentrus_nattereri
ENSMAMG00000010394puf60b10084.299ENSRNOG00000009960Puf609485.714Rattus_norvegicus
ENSMAMG00000010394puf60b10083.551ENSRBIG00000035274PUF609885.009Rhinopithecus_bieti
ENSMAMG00000010394puf60b10083.551ENSRROG00000029360PUF609985.009Rhinopithecus_roxellana
ENSMAMG00000010394puf60b10082.243ENSSBOG00000027089PUF609883.681Saimiri_boliviensis_boliviensis
ENSMAMG00000010394puf60b9083.023ENSSHAG00000006668PUF609184.375Sarcophilus_harrisii
ENSMAMG00000010394puf60b10083.456ENSSFOG00015019371puf60a9889.613Scleropages_formosus
ENSMAMG00000010394puf60b10080.300ENSSFOG00015019619puf60b9985.772Scleropages_formosus
ENSMAMG00000010394puf60b7597.980ENSSMAG00000016381puf60b7897.980Scophthalmus_maximus
ENSMAMG00000010394puf60b10097.343ENSSDUG00000009935puf60b9997.343Seriola_dumerili
ENSMAMG00000010394puf60b9781.250ENSSDUG00000007048-9683.762Seriola_dumerili
ENSMAMG00000010394puf60b10079.252ENSSLDG00000007366-9981.346Seriola_lalandi_dorsalis
ENSMAMG00000010394puf60b10097.913ENSSLDG00000024011puf60b10097.913Seriola_lalandi_dorsalis
ENSMAMG00000010394puf60b6674.504ENSSPUG00000013518PUF609378.313Sphenodon_punctatus
ENSMAMG00000010394puf60b10097.913ENSSPAG00000012144puf60b10097.913Stegastes_partitus
ENSMAMG00000010394puf60b10080.151ENSSPAG00000020285-10083.107Stegastes_partitus
ENSMAMG00000010394puf60b10083.551ENSSSCG00000038800PUF609982.008Sus_scrofa
ENSMAMG00000010394puf60b10081.343ENSTGUG00000012797-10082.955Taeniopygia_guttata
ENSMAMG00000010394puf60b9878.474ENSTRUG00000008843-10078.669Takifugu_rubripes
ENSMAMG00000010394puf60b10095.636ENSTRUG00000005420puf60b10095.636Takifugu_rubripes
ENSMAMG00000010394puf60b10077.230ENSTNIG00000003069-9979.191Tetraodon_nigroviridis
ENSMAMG00000010394puf60b10092.979ENSTNIG00000013675puf60b9995.568Tetraodon_nigroviridis
ENSMAMG00000010394puf60b7764.658ENSTBEG00000001899-10068.091Tupaia_belangeri
ENSMAMG00000010394puf60b5286.572ENSTBEG00000002751-9786.254Tupaia_belangeri
ENSMAMG00000010394puf60b10081.869ENSTTRG00000017088PUF6010084.837Tursiops_truncatus
ENSMAMG00000010394puf60b10083.738ENSUAMG00000024917PUF609885.199Ursus_americanus
ENSMAMG00000010394puf60b10078.879ENSUMAG00000000272PUF609479.887Ursus_maritimus
ENSMAMG00000010394puf60b10083.738ENSVVUG00000022527PUF6010085.988Vulpes_vulpes
ENSMAMG00000010394puf60b10082.430ENSXETG00000012469puf609983.208Xenopus_tropicalis
ENSMAMG00000010394puf60b9893.529ENSXCOG00000012355puf60b10093.529Xiphophorus_couchianus
ENSMAMG00000010394puf60b9978.764ENSXMAG00000010507-9978.764Xiphophorus_maculatus
ENSMAMG00000010394puf60b10093.738ENSXMAG00000001862puf60b10096.296Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us