EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000010402 (Gene tree)
Gene ID: 113135900
Gene Symbol: a1cf
Alias: acf
Full Name: apobec1 complementation factor
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 6252 bases
Position: chrOOHQ01000019.1:19471146-19477397
Accession: ZDB-GENE-060824-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000015334	DND1_DSRM	PF14709.7	1.4e-26	1	1
ENSMAMP00000015334	RRM_1	PF00076.22	8.3e-41	1	3
ENSMAMP00000015334	RRM_1	PF00076.22	8.3e-41	2	3
ENSMAMP00000015334	RRM_1	PF00076.22	8.3e-41	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000015756	-	1809	-	ENSMAMP00000015334	602 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000010402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000010402's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000010402	a1cf	86	48.062	ENSMAMG00000009093	rbm46	78	65.972
ENSMAMG00000010402	a1cf	89	52.788	ENSMAMG00000019143	rbm47	57	70.957
ENSMAMG00000010402	a1cf	50	52.104	ENSMAMG00000007903	syncripl	53	53.242

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000010402	a1cf	100	76.987	ENSG00000148584	A1CF	100	88.119	Homo_sapiens
ENSMAMG00000010402	a1cf	100	84.884	ENSAPOG00000008259	a1cf	100	85.216	Acanthochromis_polyacanthus
ENSMAMG00000010402	a1cf	100	74.020	ENSAMEG00000000523	A1CF	100	72.995	Ailuropoda_melanoleuca
ENSMAMG00000010402	a1cf	100	87.993	ENSACIG00000008632	a1cf	100	87.664	Amphilophus_citrinellus
ENSMAMG00000010402	a1cf	100	86.589	ENSAOCG00000023744	a1cf	100	86.755	Amphiprion_ocellaris
ENSMAMG00000010402	a1cf	100	85.294	ENSAPEG00000009537	a1cf	100	85.458	Amphiprion_percula
ENSMAMG00000010402	a1cf	100	89.292	ENSATEG00000013720	a1cf	100	89.786	Anabas_testudineus
ENSMAMG00000010402	a1cf	100	75.123	ENSAPLG00000002964	A1CF	100	73.322	Anas_platyrhynchos
ENSMAMG00000010402	a1cf	100	73.588	ENSACAG00000015269	A1CF	100	73.964	Anolis_carolinensis
ENSMAMG00000010402	a1cf	100	77.318	ENSANAG00000019974	A1CF	100	74.793	Aotus_nancymaae
ENSMAMG00000010402	a1cf	100	85.362	ENSACLG00000017428	a1cf	100	87.336	Astatotilapia_calliptera
ENSMAMG00000010402	a1cf	100	74.634	ENSAMXG00000018180	a1cf	100	74.146	Astyanax_mexicanus
ENSMAMG00000010402	a1cf	100	76.783	ENSBTAG00000021195	A1CF	100	76.087	Bos_taurus
ENSMAMG00000010402	a1cf	100	76.144	ENSCJAG00000005045	A1CF	100	73.650	Callithrix_jacchus
ENSMAMG00000010402	a1cf	100	74.426	ENSCAFG00000015581	A1CF	100	73.115	Canis_familiaris
ENSMAMG00000010402	a1cf	100	74.426	ENSCAFG00020026421	A1CF	98	79.000	Canis_lupus_dingo
ENSMAMG00000010402	a1cf	100	76.268	ENSCHIG00000020411	A1CF	100	73.813	Capra_hircus
ENSMAMG00000010402	a1cf	94	76.491	ENSTSYG00000001755	A1CF	100	74.692	Carlito_syrichta
ENSMAMG00000010402	a1cf	100	72.012	ENSCAPG00000017386	A1CF	100	54.892	Cavia_aperea
ENSMAMG00000010402	a1cf	100	74.837	ENSCPOG00000009807	A1CF	100	72.340	Cavia_porcellus
ENSMAMG00000010402	a1cf	100	75.817	ENSCCAG00000018168	A1CF	100	73.486	Cebus_capucinus
ENSMAMG00000010402	a1cf	100	76.490	ENSCATG00000043715	A1CF	100	74.461	Cercocebus_atys
ENSMAMG00000010402	a1cf	100	75.327	ENSCLAG00000010424	A1CF	100	73.650	Chinchilla_lanigera
ENSMAMG00000010402	a1cf	100	75.654	ENSCSAG00000007032	A1CF	100	73.650	Chlorocebus_sabaeus
ENSMAMG00000010402	a1cf	95	75.436	ENSCHOG00000009089	A1CF	94	73.124	Choloepus_hoffmanni
ENSMAMG00000010402	a1cf	100	75.614	ENSCPBG00000026464	A1CF	100	72.995	Chrysemys_picta_bellii
ENSMAMG00000010402	a1cf	100	75.490	ENSCANG00000038032	A1CF	100	73.486	Colobus_angolensis_palliatus
ENSMAMG00000010402	a1cf	100	74.346	ENSCGRG00001017413	A1cf	100	72.013	Cricetulus_griseus_chok1gshd
ENSMAMG00000010402	a1cf	100	73.366	ENSCGRG00000017332	A1cf	100	71.686	Cricetulus_griseus_crigri
ENSMAMG00000010402	a1cf	100	84.615	ENSCSEG00000002361	a1cf	100	84.288	Cynoglossus_semilaevis
ENSMAMG00000010402	a1cf	100	87.644	ENSCVAG00000010520	a1cf	100	88.962	Cyprinodon_variegatus
ENSMAMG00000010402	a1cf	100	81.758	ENSDARG00000002968	a1cf	100	80.763	Danio_rerio
ENSMAMG00000010402	a1cf	100	74.795	ENSDNOG00000002829	A1CF	100	72.787	Dasypus_novemcinctus
ENSMAMG00000010402	a1cf	79	85.714	ENSETEG00000012527	A1CF	79	85.714	Echinops_telfairi
ENSMAMG00000010402	a1cf	100	75.530	ENSEASG00005012924	A1CF	100	73.529	Equus_asinus_asinus
ENSMAMG00000010402	a1cf	100	75.041	ENSECAG00000010424	A1CF	100	73.039	Equus_caballus
ENSMAMG00000010402	a1cf	78	65.678	ENSEEUG00000000013	A1CF	97	64.396	Erinaceus_europaeus
ENSMAMG00000010402	a1cf	100	79.902	ENSELUG00000003159	a1cf	100	79.051	Esox_lucius
ENSMAMG00000010402	a1cf	100	75.497	ENSFCAG00000011179	A1CF	100	74.295	Felis_catus
ENSMAMG00000010402	a1cf	100	77.280	ENSFALG00000013183	A1CF	100	75.622	Ficedula_albicollis
ENSMAMG00000010402	a1cf	100	75.993	ENSFDAG00000019371	A1CF	100	73.798	Fukomys_damarensis
ENSMAMG00000010402	a1cf	100	81.342	ENSFHEG00000019652	a1cf	96	91.406	Fundulus_heteroclitus
ENSMAMG00000010402	a1cf	100	77.377	ENSGMOG00000018943	a1cf	100	76.066	Gadus_morhua
ENSMAMG00000010402	a1cf	95	75.260	ENSGALG00000003765	A1CF	96	73.529	Gallus_gallus
ENSMAMG00000010402	a1cf	100	81.758	ENSGAFG00000014868	a1cf	100	81.592	Gambusia_affinis
ENSMAMG00000010402	a1cf	100	85.270	ENSGACG00000010241	a1cf	100	83.961	Gasterosteus_aculeatus
ENSMAMG00000010402	a1cf	96	73.891	ENSGAGG00000016508	A1CF	98	71.160	Gopherus_agassizii
ENSMAMG00000010402	a1cf	100	75.980	ENSGGOG00000009670	A1CF	100	73.813	Gorilla_gorilla
ENSMAMG00000010402	a1cf	100	88.651	ENSHBUG00000021959	a1cf	100	89.967	Haplochromis_burtoni
ENSMAMG00000010402	a1cf	100	74.183	ENSHGLG00000008955	A1CF	100	73.159	Heterocephalus_glaber_female
ENSMAMG00000010402	a1cf	100	73.529	ENSHGLG00100000518	A1CF	100	72.504	Heterocephalus_glaber_male
ENSMAMG00000010402	a1cf	100	75.243	ENSHCOG00000017669	a1cf	100	76.052	Hippocampus_comes
ENSMAMG00000010402	a1cf	88	83.549	ENSIPUG00000010367	a1cf	95	82.593	Ictalurus_punctatus
ENSMAMG00000010402	a1cf	100	87.013	ENSKMAG00000006568	a1cf	100	85.065	Kryptolebias_marmoratus
ENSMAMG00000010402	a1cf	99	87.642	ENSLBEG00000020994	a1cf	99	87.805	Labrus_bergylta
ENSMAMG00000010402	a1cf	100	78.146	ENSLACG00000008061	A1CF	100	76.119	Latimeria_chalumnae
ENSMAMG00000010402	a1cf	100	79.542	ENSLOCG00000006302	a1cf	100	78.069	Lepisosteus_oculatus
ENSMAMG00000010402	a1cf	100	74.959	ENSLAFG00000015462	A1CF	100	74.632	Loxodonta_africana
ENSMAMG00000010402	a1cf	100	76.490	ENSMFAG00000035948	A1CF	100	74.461	Macaca_fascicularis
ENSMAMG00000010402	a1cf	100	76.490	ENSMMUG00000007077	A1CF	100	74.461	Macaca_mulatta
ENSMAMG00000010402	a1cf	100	76.325	ENSMNEG00000031454	A1CF	100	74.295	Macaca_nemestrina
ENSMAMG00000010402	a1cf	100	75.490	ENSMLEG00000037223	A1CF	100	73.486	Mandrillus_leucophaeus
ENSMAMG00000010402	a1cf	100	86.416	ENSMZEG00005013245	a1cf	100	84.779	Maylandia_zebra
ENSMAMG00000010402	a1cf	100	75.163	ENSMGAG00000001507	A1CF	100	73.529	Meleagris_gallopavo
ENSMAMG00000010402	a1cf	100	73.693	ENSMAUG00000007422	A1cf	100	72.013	Mesocricetus_auratus
ENSMAMG00000010402	a1cf	100	76.073	ENSMICG00000003377	A1CF	100	75.702	Microcebus_murinus
ENSMAMG00000010402	a1cf	100	75.000	ENSMOCG00000021536	A1cf	100	72.995	Microtus_ochrogaster
ENSMAMG00000010402	a1cf	100	78.347	ENSMMOG00000009422	a1cf	100	76.860	Mola_mola
ENSMAMG00000010402	a1cf	92	76.993	ENSMODG00000016478	A1CF	97	76.923	Monodelphis_domestica
ENSMAMG00000010402	a1cf	100	81.758	ENSMALG00000012992	a1cf	100	81.095	Monopterus_albus
ENSMAMG00000010402	a1cf	100	75.497	MGP_CAROLIEiJ_G0022873	A1cf	100	73.300	Mus_caroli
ENSMAMG00000010402	a1cf	100	75.497	ENSMUSG00000052595	A1cf	99	79.481	Mus_musculus
ENSMAMG00000010402	a1cf	100	74.834	MGP_PahariEiJ_G0014366	A1cf	100	72.637	Mus_pahari
ENSMAMG00000010402	a1cf	100	75.290	MGP_SPRETEiJ_G0023792	A1cf	100	72.968	Mus_spretus
ENSMAMG00000010402	a1cf	100	70.098	ENSMPUG00000016971	A1CF	100	67.921	Mustela_putorius_furo
ENSMAMG00000010402	a1cf	100	75.000	ENSMLUG00000016071	A1CF	100	73.486	Myotis_lucifugus
ENSMAMG00000010402	a1cf	100	75.000	ENSNGAG00000015136	A1cf	100	72.995	Nannospalax_galili
ENSMAMG00000010402	a1cf	100	88.322	ENSNBRG00000001712	a1cf	100	89.638	Neolamprologus_brichardi
ENSMAMG00000010402	a1cf	100	76.307	ENSNLEG00000012028	A1CF	100	74.141	Nomascus_leucogenys
ENSMAMG00000010402	a1cf	94	75.923	ENSMEUG00000015909	A1CF	100	73.989	Notamacropus_eugenii
ENSMAMG00000010402	a1cf	88	67.598	ENSOPRG00000010667	A1CF	100	64.758	Ochotona_princeps
ENSMAMG00000010402	a1cf	100	89.474	ENSONIG00000019105	a1cf	100	89.803	Oreochromis_niloticus
ENSMAMG00000010402	a1cf	78	76.433	ENSOANG00000007360	A1CF	99	75.372	Ornithorhynchus_anatinus
ENSMAMG00000010402	a1cf	100	75.166	ENSOCUG00000011587	A1CF	100	73.134	Oryctolagus_cuniculus
ENSMAMG00000010402	a1cf	100	82.410	ENSORLG00000013342	a1cf	100	81.270	Oryzias_latipes
ENSMAMG00000010402	a1cf	100	85.016	ENSORLG00020000586	a1cf	100	83.876	Oryzias_latipes_hni
ENSMAMG00000010402	a1cf	100	85.016	ENSORLG00015018569	a1cf	100	83.876	Oryzias_latipes_hsok
ENSMAMG00000010402	a1cf	100	85.430	ENSOMEG00000013531	a1cf	100	84.437	Oryzias_melastigma
ENSMAMG00000010402	a1cf	100	74.673	ENSOGAG00000012884	A1CF	100	74.632	Otolemur_garnettii
ENSMAMG00000010402	a1cf	100	75.941	ENSOARG00000013695	A1CF	100	73.486	Ovis_aries
ENSMAMG00000010402	a1cf	95	75.559	ENSPPAG00000028115	A1CF	99	76.087	Pan_paniscus
ENSMAMG00000010402	a1cf	100	74.510	ENSPPRG00000012180	A1CF	100	73.322	Panthera_pardus
ENSMAMG00000010402	a1cf	100	74.510	ENSPTIG00000021223	A1CF	100	73.322	Panthera_tigris_altaica
ENSMAMG00000010402	a1cf	100	76.987	ENSPTRG00000002508	A1CF	100	74.793	Pan_troglodytes
ENSMAMG00000010402	a1cf	100	76.490	ENSPANG00000021988	A1CF	100	74.461	Papio_anubis
ENSMAMG00000010402	a1cf	100	80.065	ENSPKIG00000025176	a1cf	100	78.723	Paramormyrops_kingsleyae
ENSMAMG00000010402	a1cf	100	75.622	ENSPSIG00000010318	A1CF	100	73.466	Pelodiscus_sinensis
ENSMAMG00000010402	a1cf	98	71.164	ENSPMGG00000013359	a1cf	99	71.953	Periophthalmus_magnuspinnatus
ENSMAMG00000010402	a1cf	100	75.000	ENSPEMG00000015021	A1cf	100	72.831	Peromyscus_maniculatus_bairdii
ENSMAMG00000010402	a1cf	100	75.124	ENSPCIG00000002175	A1CF	100	74.959	Phascolarctos_cinereus
ENSMAMG00000010402	a1cf	100	86.504	ENSPFOG00000007437	-	100	87.805	Poecilia_formosa
ENSMAMG00000010402	a1cf	100	86.504	ENSPFOG00000006683	a1cf	100	87.805	Poecilia_formosa
ENSMAMG00000010402	a1cf	100	87.479	ENSPLAG00000001210	-	100	88.797	Poecilia_latipinna
ENSMAMG00000010402	a1cf	100	87.479	ENSPLAG00000000026	a1cf	100	88.797	Poecilia_latipinna
ENSMAMG00000010402	a1cf	100	78.748	ENSPMEG00000000921	a1cf	100	79.901	Poecilia_mexicana
ENSMAMG00000010402	a1cf	100	77.724	ENSPMEG00000015529	-	100	78.862	Poecilia_mexicana
ENSMAMG00000010402	a1cf	100	86.016	ENSPREG00000016298	a1cf	100	87.154	Poecilia_reticulata
ENSMAMG00000010402	a1cf	100	77.318	ENSPPYG00000002819	A1CF	100	75.124	Pongo_abelii
ENSMAMG00000010402	a1cf	80	59.583	ENSPCAG00000006463	A1CF	68	72.973	Procavia_capensis
ENSMAMG00000010402	a1cf	100	74.510	ENSPCOG00000024172	A1CF	100	73.977	Propithecus_coquereli
ENSMAMG00000010402	a1cf	100	87.662	ENSPNYG00000017944	a1cf	100	88.961	Pundamilia_nyererei
ENSMAMG00000010402	a1cf	100	82.838	ENSPNAG00000007704	a1cf	100	81.818	Pygocentrus_nattereri
ENSMAMG00000010402	a1cf	100	75.828	ENSRNOG00000033195	A1cf	100	73.632	Rattus_norvegicus
ENSMAMG00000010402	a1cf	100	70.195	ENSRBIG00000042892	A1CF	100	71.815	Rhinopithecus_bieti
ENSMAMG00000010402	a1cf	100	75.490	ENSRROG00000041398	A1CF	100	73.486	Rhinopithecus_roxellana
ENSMAMG00000010402	a1cf	100	75.777	ENSSBOG00000021930	A1CF	100	73.650	Saimiri_boliviensis_boliviensis
ENSMAMG00000010402	a1cf	100	76.285	ENSSHAG00000005096	A1CF	100	74.461	Sarcophilus_harrisii
ENSMAMG00000010402	a1cf	100	83.663	ENSSFOG00015011774	a1cf	100	82.479	Scleropages_formosus
ENSMAMG00000010402	a1cf	100	87.279	ENSSMAG00000013271	a1cf	100	86.224	Scophthalmus_maximus
ENSMAMG00000010402	a1cf	100	88.707	ENSSDUG00000013930	a1cf	100	88.216	Seriola_dumerili
ENSMAMG00000010402	a1cf	100	82.255	ENSSLDG00000004290	a1cf	100	82.255	Seriola_lalandi_dorsalis
ENSMAMG00000010402	a1cf	95	68.586	ENSSARG00000005940	A1CF	95	68.007	Sorex_araneus
ENSMAMG00000010402	a1cf	97	72.420	ENSSPUG00000006797	A1CF	95	71.306	Sphenodon_punctatus
ENSMAMG00000010402	a1cf	100	75.777	ENSSSCG00000010431	A1CF	100	73.486	Sus_scrofa
ENSMAMG00000010402	a1cf	100	76.471	ENSTGUG00000005090	A1CF	100	74.673	Taeniopygia_guttata
ENSMAMG00000010402	a1cf	100	85.366	ENSTRUG00000001982	a1cf	100	85.528	Takifugu_rubripes
ENSMAMG00000010402	a1cf	100	85.900	ENSTNIG00000003580	a1cf	100	85.089	Tetraodon_nigroviridis
ENSMAMG00000010402	a1cf	95	72.378	ENSTTRG00000013190	A1CF	94	70.280	Tursiops_truncatus
ENSMAMG00000010402	a1cf	100	75.993	ENSUAMG00000020065	A1CF	100	73.798	Ursus_americanus
ENSMAMG00000010402	a1cf	100	74.510	ENSUMAG00000011162	A1CF	100	72.340	Ursus_maritimus
ENSMAMG00000010402	a1cf	87	73.055	ENSVPAG00000006130	A1CF	86	70.778	Vicugna_pacos
ENSMAMG00000010402	a1cf	100	76.451	ENSVVUG00000002504	A1CF	100	74.252	Vulpes_vulpes
ENSMAMG00000010402	a1cf	100	69.608	ENSXETG00000006611	a1cf	100	68.576	Xenopus_tropicalis
ENSMAMG00000010402	a1cf	100	89.718	ENSXCOG00000003302	a1cf	100	89.386	Xiphophorus_couchianus
ENSMAMG00000010402	a1cf	100	88.543	ENSXMAG00000016703	a1cf	100	88.216	Xiphophorus_maculatus