EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000010718 (Gene tree)
Gene ID: 113145781
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 12340 bases
Position: chrOOHQ01000094.1:3372218-3384557
Accession: 113145781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000015870	PRP1_N	PF06424.12	1.8e-57	1	1
ENSMAMP00000015854	PRP1_N	PF06424.12	1.9e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000016302	-	4670	-	ENSMAMP00000015870	969 (aa)	XP_026188639	UPI000E45D2A5
ENSMAMT00000016286	-	4688	-	ENSMAMP00000015854	975 (aa)	XP_026188638	UPI000E45F56E

Gene Model

Click here to download ENSMAMG00000010718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000010718's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000010718	prpf6	96	92.455	ENSG00000101161	PRPF6	100	92.030	Homo_sapiens
ENSMAMG00000010718	prpf6	100	98.246	ENSAPOG00000010395	prpf6	100	98.246	Acanthochromis_polyacanthus
ENSMAMG00000010718	prpf6	96	91.826	ENSAMEG00000001916	PRPF6	99	91.401	Ailuropoda_melanoleuca
ENSMAMG00000010718	prpf6	100	97.730	ENSACIG00000019862	prpf6	100	97.730	Amphilophus_citrinellus
ENSMAMG00000010718	prpf6	100	98.349	ENSAOCG00000012988	prpf6	100	98.349	Amphiprion_ocellaris
ENSMAMG00000010718	prpf6	96	92.151	ENSAPEG00000008301	prpf6	100	92.366	Amphiprion_percula
ENSMAMG00000010718	prpf6	100	97.730	ENSATEG00000005581	prpf6	100	97.730	Anabas_testudineus
ENSMAMG00000010718	prpf6	96	92.880	ENSACAG00000006464	PRPF6	100	89.372	Anolis_carolinensis
ENSMAMG00000010718	prpf6	96	92.455	ENSANAG00000012661	PRPF6	100	92.933	Aotus_nancymaae
ENSMAMG00000010718	prpf6	100	97.626	ENSACLG00000025875	prpf6	100	97.626	Astatotilapia_calliptera
ENSMAMG00000010718	prpf6	97	94.280	ENSAMXG00000001929	prpf6	100	92.520	Astyanax_mexicanus
ENSMAMG00000010718	prpf6	96	92.774	ENSBTAG00000011656	PRPF6	100	92.349	Bos_taurus
ENSMAMG00000010718	prpf6	96	92.455	ENSCJAG00000010616	PRPF6	100	92.030	Callithrix_jacchus
ENSMAMG00000010718	prpf6	96	92.880	ENSCAFG00000013165	PRPF6	100	92.455	Canis_familiaris
ENSMAMG00000010718	prpf6	96	92.880	ENSCAFG00020002050	PRPF6	100	92.455	Canis_lupus_dingo
ENSMAMG00000010718	prpf6	96	92.774	ENSCHIG00000018187	PRPF6	100	92.349	Capra_hircus
ENSMAMG00000010718	prpf6	96	92.880	ENSTSYG00000007814	PRPF6	100	92.455	Carlito_syrichta
ENSMAMG00000010718	prpf6	94	91.930	ENSCAPG00000015077	PRPF6	100	91.167	Cavia_aperea
ENSMAMG00000010718	prpf6	96	93.305	ENSCPOG00000007518	PRPF6	100	92.880	Cavia_porcellus
ENSMAMG00000010718	prpf6	96	89.479	ENSCCAG00000024564	PRPF6	100	89.054	Cebus_capucinus
ENSMAMG00000010718	prpf6	96	92.561	ENSCATG00000037473	PRPF6	100	92.136	Cercocebus_atys
ENSMAMG00000010718	prpf6	96	89.479	ENSCLAG00000003854	PRPF6	100	89.054	Chinchilla_lanigera
ENSMAMG00000010718	prpf6	96	87.962	ENSCSAG00000016742	PRPF6	100	87.540	Chlorocebus_sabaeus
ENSMAMG00000010718	prpf6	81	78.211	ENSCHOG00000003315	-	98	78.017	Choloepus_hoffmanni
ENSMAMG00000010718	prpf6	98	91.675	ENSCPBG00000013964	PRPF6	96	92.872	Chrysemys_picta_bellii
ENSMAMG00000010718	prpf6	96	72.622	ENSCING00000008817	-	99	72.199	Ciona_intestinalis
ENSMAMG00000010718	prpf6	96	92.349	ENSCANG00000038230	PRPF6	100	91.923	Colobus_angolensis_palliatus
ENSMAMG00000010718	prpf6	96	93.305	ENSCGRG00001022666	Prpf6	100	92.880	Cricetulus_griseus_chok1gshd
ENSMAMG00000010718	prpf6	96	92.366	ENSCSEG00000018561	prpf6	100	92.366	Cynoglossus_semilaevis
ENSMAMG00000010718	prpf6	100	96.182	ENSCVAG00000010550	prpf6	100	96.182	Cyprinodon_variegatus
ENSMAMG00000010718	prpf6	100	93.033	ENSDARG00000091367	prpf6	100	94.492	Danio_rerio
ENSMAMG00000010718	prpf6	96	92.455	ENSDNOG00000040544	PRPF6	100	92.136	Dasypus_novemcinctus
ENSMAMG00000010718	prpf6	87	92.757	ENSDORG00000005406	Prpf6	100	92.757	Dipodomys_ordii
ENSMAMG00000010718	prpf6	96	71.398	FBgn0036828	CG6841	99	71.505	Drosophila_melanogaster
ENSMAMG00000010718	prpf6	83	91.667	ENSETEG00000004447	PRPF6	85	91.667	Echinops_telfairi
ENSMAMG00000010718	prpf6	96	86.032	ENSEBUG00000008835	prpf6	100	85.608	Eptatretus_burgeri
ENSMAMG00000010718	prpf6	97	92.518	ENSEASG00005023115	PRPF6	100	92.561	Equus_asinus_asinus
ENSMAMG00000010718	prpf6	96	88.735	ENSECAG00000013983	PRPF6	100	88.310	Equus_caballus
ENSMAMG00000010718	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSMAMG00000010718	prpf6	97	95.016	ENSELUG00000001945	prpf6	94	95.016	Esox_lucius
ENSMAMG00000010718	prpf6	96	92.880	ENSFCAG00000001183	PRPF6	100	92.455	Felis_catus
ENSMAMG00000010718	prpf6	98	85.358	ENSFALG00000006046	-	97	86.702	Ficedula_albicollis
ENSMAMG00000010718	prpf6	96	92.910	ENSFALG00000010326	-	98	92.593	Ficedula_albicollis
ENSMAMG00000010718	prpf6	96	91.817	ENSFDAG00000006451	PRPF6	100	92.517	Fukomys_damarensis
ENSMAMG00000010718	prpf6	99	97.001	ENSFHEG00000000560	prpf6	99	97.001	Fundulus_heteroclitus
ENSMAMG00000010718	prpf6	97	94.168	ENSGMOG00000015622	prpf6	99	93.637	Gadus_morhua
ENSMAMG00000010718	prpf6	96	92.986	ENSGALG00000006001	PRPF6	100	92.667	Gallus_gallus
ENSMAMG00000010718	prpf6	100	92.673	ENSGAFG00000021109	prpf6	100	92.673	Gambusia_affinis
ENSMAMG00000010718	prpf6	97	95.975	ENSGACG00000002576	prpf6	100	95.975	Gasterosteus_aculeatus
ENSMAMG00000010718	prpf6	98	91.771	ENSGAGG00000008653	PRPF6	99	90.286	Gopherus_agassizii
ENSMAMG00000010718	prpf6	96	92.455	ENSGGOG00000016876	PRPF6	100	92.030	Gorilla_gorilla
ENSMAMG00000010718	prpf6	100	97.626	ENSHBUG00000004496	prpf6	100	97.626	Haplochromis_burtoni
ENSMAMG00000010718	prpf6	96	93.199	ENSHGLG00000009222	PRPF6	100	92.774	Heterocephalus_glaber_female
ENSMAMG00000010718	prpf6	94	93.021	ENSHGLG00100016600	PRPF6	100	92.694	Heterocephalus_glaber_male
ENSMAMG00000010718	prpf6	100	96.285	ENSHCOG00000011513	prpf6	100	96.285	Hippocampus_comes
ENSMAMG00000010718	prpf6	100	92.813	ENSIPUG00000004912	prpf6	100	92.813	Ictalurus_punctatus
ENSMAMG00000010718	prpf6	96	90.764	ENSSTOG00000002922	PRPF6	100	89.915	Ictidomys_tridecemlineatus
ENSMAMG00000010718	prpf6	96	93.305	ENSJJAG00000000836	Prpf6	100	92.880	Jaculus_jaculus
ENSMAMG00000010718	prpf6	100	97.730	ENSKMAG00000017800	prpf6	100	97.730	Kryptolebias_marmoratus
ENSMAMG00000010718	prpf6	100	96.698	ENSLBEG00000012582	prpf6	100	96.698	Labrus_bergylta
ENSMAMG00000010718	prpf6	96	94.374	ENSLOCG00000004827	prpf6	100	90.572	Lepisosteus_oculatus
ENSMAMG00000010718	prpf6	96	92.561	ENSLAFG00000005272	PRPF6	100	92.136	Loxodonta_africana
ENSMAMG00000010718	prpf6	96	92.349	ENSMFAG00000037542	PRPF6	100	91.923	Macaca_fascicularis
ENSMAMG00000010718	prpf6	96	86.306	ENSMMUG00000015558	PRPF6	98	93.761	Macaca_mulatta
ENSMAMG00000010718	prpf6	96	80.085	ENSMNEG00000045555	PRPF6	100	79.661	Macaca_nemestrina
ENSMAMG00000010718	prpf6	90	97.829	ENSMZEG00005026539	prpf6	100	97.829	Maylandia_zebra
ENSMAMG00000010718	prpf6	97	97.868	ENSMZEG00005015261	-	100	97.868	Maylandia_zebra
ENSMAMG00000010718	prpf6	94	93.021	ENSMGAG00000006634	PRPF6	100	92.803	Meleagris_gallopavo
ENSMAMG00000010718	prpf6	96	93.305	ENSMAUG00000013969	Prpf6	100	92.880	Mesocricetus_auratus
ENSMAMG00000010718	prpf6	84	91.971	ENSMICG00000017793	PRPF6	98	91.985	Microcebus_murinus
ENSMAMG00000010718	prpf6	96	93.199	ENSMOCG00000001701	Prpf6	100	92.774	Microtus_ochrogaster
ENSMAMG00000010718	prpf6	96	97.849	ENSMMOG00000020419	prpf6	100	97.849	Mola_mola
ENSMAMG00000010718	prpf6	94	93.958	ENSMODG00000017051	PRPF6	99	93.588	Monodelphis_domestica
ENSMAMG00000010718	prpf6	95	98.587	ENSMALG00000000089	prpf6	100	98.587	Monopterus_albus
ENSMAMG00000010718	prpf6	96	86.929	MGP_CAROLIEiJ_G0024814	Prpf6	100	96.296	Mus_caroli
ENSMAMG00000010718	prpf6	96	93.305	ENSMUSG00000002455	Prpf6	100	96.296	Mus_musculus
ENSMAMG00000010718	prpf6	96	93.305	MGP_PahariEiJ_G0026262	Prpf6	100	96.296	Mus_pahari
ENSMAMG00000010718	prpf6	96	93.305	MGP_SPRETEiJ_G0025741	Prpf6	100	96.296	Mus_spretus
ENSMAMG00000010718	prpf6	86	93.074	ENSMPUG00000008673	PRPF6	98	93.074	Mustela_putorius_furo
ENSMAMG00000010718	prpf6	96	93.411	ENSNGAG00000003365	Prpf6	100	92.986	Nannospalax_galili
ENSMAMG00000010718	prpf6	100	97.730	ENSNBRG00000015025	prpf6	100	97.730	Neolamprologus_brichardi
ENSMAMG00000010718	prpf6	96	92.349	ENSNLEG00000010208	PRPF6	100	91.923	Nomascus_leucogenys
ENSMAMG00000010718	prpf6	96	83.534	ENSMEUG00000009824	-	90	83.794	Notamacropus_eugenii
ENSMAMG00000010718	prpf6	96	87.354	ENSODEG00000004841	PRPF6	100	86.929	Octodon_degus
ENSMAMG00000010718	prpf6	100	97.833	ENSONIG00000017406	prpf6	100	97.833	Oreochromis_niloticus
ENSMAMG00000010718	prpf6	96	93.199	ENSOANG00000004920	PRPF6	100	92.774	Ornithorhynchus_anatinus
ENSMAMG00000010718	prpf6	95	90.987	ENSOCUG00000014151	PRPF6	100	90.558	Oryctolagus_cuniculus
ENSMAMG00000010718	prpf6	100	95.459	ENSORLG00000009592	prpf6	100	95.459	Oryzias_latipes
ENSMAMG00000010718	prpf6	100	95.562	ENSORLG00020001458	prpf6	100	95.562	Oryzias_latipes_hni
ENSMAMG00000010718	prpf6	100	95.562	ENSORLG00015018762	prpf6	100	95.562	Oryzias_latipes_hsok
ENSMAMG00000010718	prpf6	100	96.078	ENSOMEG00000012174	prpf6	100	96.078	Oryzias_melastigma
ENSMAMG00000010718	prpf6	96	85.881	ENSOGAG00000007573	PRPF6	100	85.456	Otolemur_garnettii
ENSMAMG00000010718	prpf6	98	91.127	ENSOARG00000008776	PRPF6	99	91.923	Ovis_aries
ENSMAMG00000010718	prpf6	96	92.455	ENSPPAG00000008686	PRPF6	100	92.030	Pan_paniscus
ENSMAMG00000010718	prpf6	96	92.880	ENSPPRG00000008497	PRPF6	100	92.455	Panthera_pardus
ENSMAMG00000010718	prpf6	94	92.694	ENSPTIG00000011184	PRPF6	97	92.366	Panthera_tigris_altaica
ENSMAMG00000010718	prpf6	96	92.455	ENSPTRG00000013765	PRPF6	100	92.030	Pan_troglodytes
ENSMAMG00000010718	prpf6	96	92.136	ENSPANG00000024135	PRPF6	100	91.711	Papio_anubis
ENSMAMG00000010718	prpf6	98	93.154	ENSPKIG00000005627	prpf6	99	94.374	Paramormyrops_kingsleyae
ENSMAMG00000010718	prpf6	90	92.857	ENSPSIG00000007717	PRPF6	100	92.404	Pelodiscus_sinensis
ENSMAMG00000010718	prpf6	99	95.455	ENSPMGG00000008925	prpf6	99	95.455	Periophthalmus_magnuspinnatus
ENSMAMG00000010718	prpf6	96	93.305	ENSPEMG00000016036	Prpf6	100	92.880	Peromyscus_maniculatus_bairdii
ENSMAMG00000010718	prpf6	98	87.147	ENSPMAG00000006144	prpf6	100	87.671	Petromyzon_marinus
ENSMAMG00000010718	prpf6	96	93.305	ENSPCIG00000017909	PRPF6	100	92.880	Phascolarctos_cinereus
ENSMAMG00000010718	prpf6	100	96.217	ENSPFOG00000006431	prpf6	99	96.217	Poecilia_formosa
ENSMAMG00000010718	prpf6	100	97.007	ENSPLAG00000005974	prpf6	100	97.007	Poecilia_latipinna
ENSMAMG00000010718	prpf6	100	97.214	ENSPMEG00000009977	prpf6	100	97.214	Poecilia_mexicana
ENSMAMG00000010718	prpf6	100	97.110	ENSPREG00000017993	prpf6	95	97.110	Poecilia_reticulata
ENSMAMG00000010718	prpf6	96	91.923	ENSPPYG00000011256	PRPF6	100	91.498	Pongo_abelii
ENSMAMG00000010718	prpf6	91	95.261	ENSPCAG00000006536	PRPF6	88	95.261	Procavia_capensis
ENSMAMG00000010718	prpf6	96	92.455	ENSPCOG00000016881	PRPF6	100	92.030	Propithecus_coquereli
ENSMAMG00000010718	prpf6	96	86.929	ENSPVAG00000014316	PRPF6	100	86.504	Pteropus_vampyrus
ENSMAMG00000010718	prpf6	100	83.778	ENSPNYG00000001939	prpf6	100	85.641	Pundamilia_nyererei
ENSMAMG00000010718	prpf6	100	93.750	ENSPNAG00000015606	prpf6	100	93.750	Pygocentrus_nattereri
ENSMAMG00000010718	prpf6	96	93.199	ENSRNOG00000051498	Prpf6	100	92.774	Rattus_norvegicus
ENSMAMG00000010718	prpf6	96	92.349	ENSRBIG00000043613	PRPF6	100	91.923	Rhinopithecus_bieti
ENSMAMG00000010718	prpf6	96	89.335	ENSRROG00000040969	PRPF6	98	92.388	Rhinopithecus_roxellana
ENSMAMG00000010718	prpf6	87	89.912	ENSSBOG00000020632	PRPF6	93	87.716	Saimiri_boliviensis_boliviensis
ENSMAMG00000010718	prpf6	96	93.305	ENSSHAG00000016810	PRPF6	100	92.880	Sarcophilus_harrisii
ENSMAMG00000010718	prpf6	95	95.386	ENSSFOG00015020859	prpf6	100	95.376	Scleropages_formosus
ENSMAMG00000010718	prpf6	100	95.872	ENSSMAG00000008112	prpf6	100	95.872	Scophthalmus_maximus
ENSMAMG00000010718	prpf6	100	98.142	ENSSDUG00000016142	prpf6	100	98.142	Seriola_dumerili
ENSMAMG00000010718	prpf6	100	98.142	ENSSLDG00000025283	prpf6	99	98.142	Seriola_lalandi_dorsalis
ENSMAMG00000010718	prpf6	90	91.714	ENSSPUG00000018260	PRPF6	100	91.260	Sphenodon_punctatus
ENSMAMG00000010718	prpf6	100	98.246	ENSSPAG00000015850	prpf6	100	98.246	Stegastes_partitus
ENSMAMG00000010718	prpf6	98	91.042	ENSSSCG00000029119	PRPF6	98	92.263	Sus_scrofa
ENSMAMG00000010718	prpf6	96	93.008	ENSTGUG00000007221	PRPF6	100	92.691	Taeniopygia_guttata
ENSMAMG00000010718	prpf6	100	96.594	ENSTRUG00000002920	prpf6	100	96.594	Takifugu_rubripes
ENSMAMG00000010718	prpf6	96	90.755	ENSTNIG00000017873	prpf6	100	90.755	Tetraodon_nigroviridis
ENSMAMG00000010718	prpf6	85	94.444	ENSTBEG00000005348	PRPF6	85	92.222	Tupaia_belangeri
ENSMAMG00000010718	prpf6	96	92.561	ENSTTRG00000013068	PRPF6	100	92.136	Tursiops_truncatus
ENSMAMG00000010718	prpf6	98	87.461	ENSUMAG00000021631	PRPF6	98	90.870	Ursus_maritimus
ENSMAMG00000010718	prpf6	96	92.880	ENSVVUG00000014948	PRPF6	100	92.455	Vulpes_vulpes
ENSMAMG00000010718	prpf6	98	91.032	ENSXETG00000012054	prpf6	97	92.128	Xenopus_tropicalis
ENSMAMG00000010718	prpf6	100	97.317	ENSXCOG00000008082	prpf6	100	97.317	Xiphophorus_couchianus
ENSMAMG00000010718	prpf6	100	97.214	ENSXMAG00000015581	prpf6	100	97.214	Xiphophorus_maculatus