EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000011027 (Gene tree)
Gene ID: 113124474
Gene Symbol: setd1ba
Alias: im:7156157|si:dkey-237o15.4
Full Name: histone-lysine N-methyltransferase SETD1B-A-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 15626 bases
Position: chrOOHQ01000096.1:11801618-11817243
Accession: 113124474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000016275	RRM_1	PF00076.22	4.6e-09	1	1
ENSMAMP00000016287	RRM_1	PF00076.22	4.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000016715	-	7831	-	ENSMAMP00000016275	1805 (aa)	XP_026153167	UPI000E45B893
ENSMAMT00000016728	-	8642	-	ENSMAMP00000016287	1830 (aa)	XP_026153164	UPI000E464345

Gene Model

Click here to download ENSMAMG00000011027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000011027's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000011027	setd1ba	54	58.739	ENSMAMG00000021851	setd1a	69	54.545

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000011027	setd1ba	55	91.249	ENSAPOG00000014731	setd1ba	100	87.765	Acanthochromis_polyacanthus
ENSMAMG00000011027	setd1ba	100	77.290	ENSACIG00000016453	setd1ba	100	78.230	Amphilophus_citrinellus
ENSMAMG00000011027	setd1ba	97	87.108	ENSAOCG00000012148	setd1ba	99	86.827	Amphiprion_ocellaris
ENSMAMG00000011027	setd1ba	100	83.542	ENSAPEG00000010762	setd1ba	99	83.270	Amphiprion_percula
ENSMAMG00000011027	setd1ba	92	87.879	ENSATEG00000021563	setd1ba	100	88.187	Anabas_testudineus
ENSMAMG00000011027	setd1ba	55	86.640	ENSACLG00000016584	setd1ba	100	83.813	Astatotilapia_calliptera
ENSMAMG00000011027	setd1ba	50	71.131	ENSCHIG00000013406	SETD1B	89	54.120	Capra_hircus
ENSMAMG00000011027	setd1ba	88	67.170	ENSCANG00000023445	SETD1B	96	67.170	Colobus_angolensis_palliatus
ENSMAMG00000011027	setd1ba	52	68.874	ENSCGRG00000016965	-	57	68.404	Cricetulus_griseus_crigri
ENSMAMG00000011027	setd1ba	56	80.495	ENSCGRG00000018075	Setd1b	73	73.370	Cricetulus_griseus_crigri
ENSMAMG00000011027	setd1ba	55	84.768	ENSCSEG00000001458	setd1ba	100	81.216	Cynoglossus_semilaevis
ENSMAMG00000011027	setd1ba	55	78.522	ENSCVAG00000022068	setd1ba	99	73.071	Cyprinodon_variegatus
ENSMAMG00000011027	setd1ba	50	84.416	ENSFALG00000009136	SETD1B	87	57.945	Ficedula_albicollis
ENSMAMG00000011027	setd1ba	53	90.476	ENSGMOG00000009831	setd1ba	59	90.476	Gadus_morhua
ENSMAMG00000011027	setd1ba	88	81.426	ENSGAFG00000008712	setd1ba	96	81.426	Gambusia_affinis
ENSMAMG00000011027	setd1ba	100	83.044	ENSHBUG00000019992	setd1ba	100	83.885	Haplochromis_burtoni
ENSMAMG00000011027	setd1ba	100	77.509	ENSHCOG00000001951	setd1ba	99	76.234	Hippocampus_comes
ENSMAMG00000011027	setd1ba	55	79.389	ENSKMAG00000007804	setd1ba	99	77.081	Kryptolebias_marmoratus
ENSMAMG00000011027	setd1ba	100	77.916	ENSLBEG00000020113	setd1ba	99	77.477	Labrus_bergylta
ENSMAMG00000011027	setd1ba	52	65.668	ENSMLEG00000039573	SETD1B	94	54.895	Mandrillus_leucophaeus
ENSMAMG00000011027	setd1ba	55	86.640	ENSMZEG00005026617	setd1ba	100	83.813	Maylandia_zebra
ENSMAMG00000011027	setd1ba	100	83.027	ENSMMOG00000008190	setd1ba	99	83.848	Mola_mola
ENSMAMG00000011027	setd1ba	100	87.189	ENSMALG00000005362	setd1ba	100	88.063	Monopterus_albus
ENSMAMG00000011027	setd1ba	55	86.542	ENSNBRG00000002915	setd1ba	99	81.138	Neolamprologus_brichardi
ENSMAMG00000011027	setd1ba	55	86.024	ENSONIG00000013898	setd1ba	99	83.397	Oreochromis_niloticus
ENSMAMG00000011027	setd1ba	100	75.303	ENSORLG00000008435	setd1ba	100	75.692	Oryzias_latipes
ENSMAMG00000011027	setd1ba	100	75.258	ENSORLG00020017079	setd1ba	100	75.800	Oryzias_latipes_hni
ENSMAMG00000011027	setd1ba	66	75.123	ENSORLG00015004156	setd1ba	99	75.606	Oryzias_latipes_hsok
ENSMAMG00000011027	setd1ba	100	76.656	ENSOMEG00000002270	setd1ba	100	76.439	Oryzias_melastigma
ENSMAMG00000011027	setd1ba	87	78.871	ENSPMGG00000011527	setd1ba	94	77.549	Periophthalmus_magnuspinnatus
ENSMAMG00000011027	setd1ba	55	78.829	ENSPFOG00000019768	setd1ba	100	78.054	Poecilia_formosa
ENSMAMG00000011027	setd1ba	55	86.542	ENSPNYG00000009484	setd1ba	99	81.216	Pundamilia_nyererei
ENSMAMG00000011027	setd1ba	94	60.535	ENSPNAG00000016011	setd1ba	99	60.701	Pygocentrus_nattereri
ENSMAMG00000011027	setd1ba	100	78.036	ENSSMAG00000001244	setd1ba	99	77.334	Scophthalmus_maximus
ENSMAMG00000011027	setd1ba	50	66.894	ENSSPUG00000011847	SETD1B	89	58.022	Sphenodon_punctatus
ENSMAMG00000011027	setd1ba	100	87.025	ENSSPAG00000015470	setd1ba	100	86.428	Stegastes_partitus
ENSMAMG00000011027	setd1ba	71	81.424	ENSSSCG00000009806	SETD1B	90	60.892	Sus_scrofa
ENSMAMG00000011027	setd1ba	100	78.913	ENSTNIG00000009090	setd1ba	100	78.964	Tetraodon_nigroviridis