EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000011569 (Gene tree)
Gene ID: 113133772
Gene Symbol: chd7
Alias: si:ch211-197o6.2|wu:cegs2051|wu:fb37f10|wu:fb39h04|wu:fd19h06
Full Name: chromodomain helicase DNA binding protein 7
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 71359 bases
Position: chrOOHQ01000035.1:4187875-4259233
Accession: 113133772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000017075	ResIII	PF04851.15	4.8e-06	1	1
ENSMAMP00000017075	BRK	PF07533.16	4.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000017538	-	12559	XM_026312653	ENSMAMP00000017075	3304 (aa)	XP_026168438	UPI000E45B3E4

Gene Model

Click here to download ENSMAMG00000011569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000011569's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000011569	chd7	63	58.588	ENSMAMG00000013111	chd6	54	61.923
ENSMAMG00000011569	chd7	59	71.793	ENSMAMG00000003909	chd9	70	70.119

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000011569	chd7	67	79.728	ENSG00000171316	CHD7	84	70.370	Homo_sapiens
ENSMAMG00000011569	chd7	82	86.295	ENSAPOG00000009351	chd7	99	83.779	Acanthochromis_polyacanthus
ENSMAMG00000011569	chd7	66	79.888	ENSAMEG00000005699	CHD7	72	79.728	Ailuropoda_melanoleuca
ENSMAMG00000011569	chd7	71	85.776	ENSACIG00000001590	chd7	99	86.494	Amphilophus_citrinellus
ENSMAMG00000011569	chd7	72	87.210	ENSAOCG00000002337	chd7	100	86.002	Amphiprion_ocellaris
ENSMAMG00000011569	chd7	98	85.411	ENSAPEG00000010332	chd7	98	88.924	Amphiprion_percula
ENSMAMG00000011569	chd7	67	95.629	ENSATEG00000002590	chd7	99	86.212	Anabas_testudineus
ENSMAMG00000011569	chd7	70	79.952	ENSAPLG00000005873	CHD7	72	79.791	Anas_platyrhynchos
ENSMAMG00000011569	chd7	70	79.647	ENSACAG00000005760	CHD7	72	79.407	Anolis_carolinensis
ENSMAMG00000011569	chd7	66	79.728	ENSANAG00000035300	CHD7	73	79.567	Aotus_nancymaae
ENSMAMG00000011569	chd7	70	71.864	ENSAMXG00000006180	chd7	95	68.166	Astyanax_mexicanus
ENSMAMG00000011569	chd7	65	79.440	ENSBTAG00000021841	CHD7	77	79.327	Bos_taurus
ENSMAMG00000011569	chd7	66	79.728	ENSCJAG00000009025	CHD7	72	79.567	Callithrix_jacchus
ENSMAMG00000011569	chd7	68	79.728	ENSCAFG00000007167	CHD7	72	79.567	Canis_familiaris
ENSMAMG00000011569	chd7	68	78.973	ENSCAFG00020015856	CHD7	72	78.571	Canis_lupus_dingo
ENSMAMG00000011569	chd7	52	68.728	ENSCAFG00020014565	CHD8	81	72.650	Canis_lupus_dingo
ENSMAMG00000011569	chd7	65	79.440	ENSCHIG00000011729	CHD7	72	78.652	Capra_hircus
ENSMAMG00000011569	chd7	67	79.487	ENSTSYG00000004018	CHD7	72	79.327	Carlito_syrichta
ENSMAMG00000011569	chd7	69	74.519	ENSCAPG00000007952	CHD7	71	74.359	Cavia_aperea
ENSMAMG00000011569	chd7	69	79.968	ENSCPOG00000013385	CHD7	72	79.808	Cavia_porcellus
ENSMAMG00000011569	chd7	86	79.567	ENSCCAG00000025831	CHD7	72	79.407	Cebus_capucinus
ENSMAMG00000011569	chd7	59	66.867	ENSCATG00000004861	CHD8	66	68.864	Cercocebus_atys
ENSMAMG00000011569	chd7	66	79.728	ENSCATG00000020229	CHD7	72	79.567	Cercocebus_atys
ENSMAMG00000011569	chd7	66	79.808	ENSCLAG00000004679	CHD7	72	79.647	Chinchilla_lanigera
ENSMAMG00000011569	chd7	66	79.647	ENSCSAG00000014349	CHD7	72	79.487	Chlorocebus_sabaeus
ENSMAMG00000011569	chd7	59	66.792	ENSCSAG00000016489	CHD8	59	68.785	Chlorocebus_sabaeus
ENSMAMG00000011569	chd7	77	81.103	ENSCPBG00000021517	CHD7	93	80.160	Chrysemys_picta_bellii
ENSMAMG00000011569	chd7	67	79.567	ENSCANG00000041382	CHD7	72	79.407	Colobus_angolensis_palliatus
ENSMAMG00000011569	chd7	59	66.867	ENSCANG00000042948	CHD8	66	68.864	Colobus_angolensis_palliatus
ENSMAMG00000011569	chd7	68	79.888	ENSCGRG00001011949	Chd7	73	79.728	Cricetulus_griseus_chok1gshd
ENSMAMG00000011569	chd7	59	66.867	ENSCGRG00001014351	Chd8	61	68.944	Cricetulus_griseus_chok1gshd
ENSMAMG00000011569	chd7	59	66.867	ENSCGRG00000009710	Chd8	63	68.944	Cricetulus_griseus_crigri
ENSMAMG00000011569	chd7	68	74.704	ENSCGRG00000000481	Chd7	71	74.920	Cricetulus_griseus_crigri
ENSMAMG00000011569	chd7	71	85.076	ENSCSEG00000017886	chd7	96	85.526	Cynoglossus_semilaevis
ENSMAMG00000011569	chd7	98	80.404	ENSCVAG00000017584	chd7	99	81.294	Cyprinodon_variegatus
ENSMAMG00000011569	chd7	75	70.132	ENSDARG00000075211	chd7	95	69.574	Danio_rerio
ENSMAMG00000011569	chd7	66	79.567	ENSDNOG00000011674	CHD7	72	79.407	Dasypus_novemcinctus
ENSMAMG00000011569	chd7	68	79.407	ENSDORG00000003515	Chd7	70	79.247	Dipodomys_ordii
ENSMAMG00000011569	chd7	53	77.373	ENSETEG00000016689	-	56	77.057	Echinops_telfairi
ENSMAMG00000011569	chd7	66	79.728	ENSEASG00005016258	CHD7	72	79.567	Equus_asinus_asinus
ENSMAMG00000011569	chd7	74	79.728	ENSECAG00000001445	CHD7	89	79.567	Equus_caballus
ENSMAMG00000011569	chd7	50	62.854	ENSECAG00000016102	CHD8	59	68.785	Equus_caballus
ENSMAMG00000011569	chd7	73	83.824	ENSEEUG00000013559	CHD7	70	78.462	Erinaceus_europaeus
ENSMAMG00000011569	chd7	82	80.577	ENSELUG00000024442	chd7	95	69.172	Esox_lucius
ENSMAMG00000011569	chd7	51	59.679	ENSELUG00000004302	chd8	64	63.978	Esox_lucius
ENSMAMG00000011569	chd7	66	79.664	ENSFCAG00000003849	CHD7	72	79.504	Felis_catus
ENSMAMG00000011569	chd7	70	79.679	ENSFALG00000005570	CHD7	73	70.387	Ficedula_albicollis
ENSMAMG00000011569	chd7	70	80.048	ENSFDAG00000000528	CHD7	72	79.887	Fukomys_damarensis
ENSMAMG00000011569	chd7	100	80.132	ENSFHEG00000001311	chd7	99	81.364	Fundulus_heteroclitus
ENSMAMG00000011569	chd7	58	86.282	ENSGMOG00000004232	chd7	94	86.737	Gadus_morhua
ENSMAMG00000011569	chd7	70	79.711	ENSGALG00000041080	CHD7	72	79.551	Gallus_gallus
ENSMAMG00000011569	chd7	80	83.296	ENSGAFG00000006858	chd7	96	83.522	Gambusia_affinis
ENSMAMG00000011569	chd7	69	83.019	ENSGACG00000014897	chd7	99	76.038	Gasterosteus_aculeatus
ENSMAMG00000011569	chd7	75	80.845	ENSGAGG00000017996	CHD7	94	80.071	Gopherus_agassizii
ENSMAMG00000011569	chd7	67	79.808	ENSGGOG00000012224	CHD7	72	79.647	Gorilla_gorilla
ENSMAMG00000011569	chd7	100	82.285	ENSHBUG00000019225	chd7	100	82.141	Haplochromis_burtoni
ENSMAMG00000011569	chd7	51	64.135	ENSHGLG00100015649	CHD7	72	79.887	Heterocephalus_glaber_male
ENSMAMG00000011569	chd7	99	78.031	ENSHCOG00000014380	chd7	98	82.316	Hippocampus_comes
ENSMAMG00000011569	chd7	68	75.000	ENSIPUG00000007585	chd7	67	75.758	Ictalurus_punctatus
ENSMAMG00000011569	chd7	67	79.728	ENSSTOG00000011949	CHD7	72	79.567	Ictidomys_tridecemlineatus
ENSMAMG00000011569	chd7	59	66.816	ENSSTOG00000001854	CHD8	59	68.864	Ictidomys_tridecemlineatus
ENSMAMG00000011569	chd7	68	79.728	ENSJJAG00000022064	Chd7	72	79.567	Jaculus_jaculus
ENSMAMG00000011569	chd7	98	82.928	ENSKMAG00000009724	chd7	100	81.992	Kryptolebias_marmoratus
ENSMAMG00000011569	chd7	100	81.110	ENSLBEG00000020842	chd7	100	81.558	Labrus_bergylta
ENSMAMG00000011569	chd7	51	67.633	ENSLACG00000011367	CHD8	67	66.486	Latimeria_chalumnae
ENSMAMG00000011569	chd7	61	81.531	ENSLOCG00000005062	chd7	98	57.708	Lepisosteus_oculatus
ENSMAMG00000011569	chd7	69	79.407	ENSLAFG00000000403	CHD7	73	79.167	Loxodonta_africana
ENSMAMG00000011569	chd7	66	79.728	ENSMFAG00000041825	CHD7	86	79.567	Macaca_fascicularis
ENSMAMG00000011569	chd7	59	66.867	ENSMFAG00000035402	CHD8	66	68.864	Macaca_fascicularis
ENSMAMG00000011569	chd7	59	66.867	ENSMMUG00000015002	CHD8	66	68.864	Macaca_mulatta
ENSMAMG00000011569	chd7	66	79.728	ENSMMUG00000011584	CHD7	72	79.567	Macaca_mulatta
ENSMAMG00000011569	chd7	66	79.728	ENSMNEG00000040978	CHD7	72	79.567	Macaca_nemestrina
ENSMAMG00000011569	chd7	59	66.867	ENSMNEG00000031076	CHD8	66	68.864	Macaca_nemestrina
ENSMAMG00000011569	chd7	59	66.867	ENSMLEG00000035911	CHD8	66	68.864	Mandrillus_leucophaeus
ENSMAMG00000011569	chd7	66	79.728	ENSMLEG00000038817	CHD7	72	79.567	Mandrillus_leucophaeus
ENSMAMG00000011569	chd7	100	82.171	ENSMZEG00005010646	chd7	100	82.046	Maylandia_zebra
ENSMAMG00000011569	chd7	70	79.872	ENSMGAG00000011092	CHD7	51	56.929	Meleagris_gallopavo
ENSMAMG00000011569	chd7	57	66.525	ENSMAUG00000015827	Chd8	57	66.753	Mesocricetus_auratus
ENSMAMG00000011569	chd7	84	82.121	ENSMAUG00000001000	Chd7	71	82.121	Mesocricetus_auratus
ENSMAMG00000011569	chd7	68	79.808	ENSMICG00000002430	CHD7	72	79.647	Microcebus_murinus
ENSMAMG00000011569	chd7	68	79.728	ENSMOCG00000011408	Chd7	73	79.567	Microtus_ochrogaster
ENSMAMG00000011569	chd7	51	68.374	ENSMMOG00000021538	-	91	78.814	Mola_mola
ENSMAMG00000011569	chd7	68	80.208	ENSMODG00000008488	CHD7	73	80.048	Monodelphis_domestica
ENSMAMG00000011569	chd7	74	88.192	ENSMALG00000004389	chd7	99	87.989	Monopterus_albus
ENSMAMG00000011569	chd7	51	59.160	MGP_PahariEiJ_G0023920	Chd7	73	79.327	Mus_pahari
ENSMAMG00000011569	chd7	57	79.728	ENSMPUG00000002338	CHD7	76	79.567	Mustela_putorius_furo
ENSMAMG00000011569	chd7	66	77.262	ENSMLUG00000015266	CHD7	70	77.182	Myotis_lucifugus
ENSMAMG00000011569	chd7	91	77.222	ENSNGAG00000010767	Chd7	74	79.407	Nannospalax_galili
ENSMAMG00000011569	chd7	75	80.179	ENSNBRG00000001280	chd7	98	79.872	Neolamprologus_brichardi
ENSMAMG00000011569	chd7	67	79.728	ENSNLEG00000002027	CHD7	72	79.567	Nomascus_leucogenys
ENSMAMG00000011569	chd7	57	74.614	ENSMEUG00000010045	CHD7	74	74.194	Notamacropus_eugenii
ENSMAMG00000011569	chd7	67	79.728	ENSODEG00000002424	CHD7	72	79.567	Octodon_degus
ENSMAMG00000011569	chd7	50	60.175	ENSONIG00000015569	chd8	60	65.098	Oreochromis_niloticus
ENSMAMG00000011569	chd7	98	77.696	ENSONIG00000016614	chd7	100	78.139	Oreochromis_niloticus
ENSMAMG00000011569	chd7	71	80.048	ENSOCUG00000010034	CHD7	89	79.888	Oryctolagus_cuniculus
ENSMAMG00000011569	chd7	98	80.476	ENSORLG00000013492	chd7	98	80.461	Oryzias_latipes
ENSMAMG00000011569	chd7	50	59.516	ENSORLG00000012103	chd8	64	58.444	Oryzias_latipes
ENSMAMG00000011569	chd7	98	80.409	ENSORLG00020020002	chd7	98	80.572	Oryzias_latipes_hni
ENSMAMG00000011569	chd7	98	80.372	ENSORLG00015020858	chd7	98	80.536	Oryzias_latipes_hsok
ENSMAMG00000011569	chd7	98	80.731	ENSOMEG00000016881	chd7	98	81.206	Oryzias_melastigma
ENSMAMG00000011569	chd7	69	79.888	ENSOGAG00000013905	CHD7	72	79.728	Otolemur_garnettii
ENSMAMG00000011569	chd7	67	79.728	ENSPPAG00000033330	CHD7	72	79.567	Pan_paniscus
ENSMAMG00000011569	chd7	51	66.393	ENSPPAG00000039987	CHD8	59	68.429	Pan_paniscus
ENSMAMG00000011569	chd7	68	75.267	ENSPPRG00000022248	CHD7	72	79.567	Panthera_pardus
ENSMAMG00000011569	chd7	63	78.623	ENSPTIG00000011702	CHD7	68	78.463	Panthera_tigris_altaica
ENSMAMG00000011569	chd7	67	79.728	ENSPTRG00000020286	CHD7	72	79.567	Pan_troglodytes
ENSMAMG00000011569	chd7	59	66.867	ENSPANG00000011742	CHD8	66	68.864	Papio_anubis
ENSMAMG00000011569	chd7	66	79.728	ENSPANG00000018419	CHD7	72	79.567	Papio_anubis
ENSMAMG00000011569	chd7	75	65.687	ENSPKIG00000009637	chd7	74	65.616	Paramormyrops_kingsleyae
ENSMAMG00000011569	chd7	50	63.636	ENSPKIG00000009142	chd8	59	66.952	Paramormyrops_kingsleyae
ENSMAMG00000011569	chd7	70	80.112	ENSPSIG00000012003	CHD7	73	70.532	Pelodiscus_sinensis
ENSMAMG00000011569	chd7	71	83.597	ENSPMGG00000018543	chd7	95	82.848	Periophthalmus_magnuspinnatus
ENSMAMG00000011569	chd7	86	80.948	ENSPEMG00000023028	Chd7	72	80.877	Peromyscus_maniculatus_bairdii
ENSMAMG00000011569	chd7	50	65.918	ENSPCIG00000020931	CHD8	70	70.127	Phascolarctos_cinereus
ENSMAMG00000011569	chd7	69	81.686	ENSPCIG00000000025	-	76	80.286	Phascolarctos_cinereus
ENSMAMG00000011569	chd7	59	63.136	ENSPFOG00000010939	-	90	63.617	Poecilia_formosa
ENSMAMG00000011569	chd7	100	79.586	ENSPFOG00000004891	chd7	99	98.701	Poecilia_formosa
ENSMAMG00000011569	chd7	100	79.413	ENSPLAG00000023322	chd7	98	80.926	Poecilia_latipinna
ENSMAMG00000011569	chd7	76	85.890	ENSPMEG00000005879	chd7	73	86.113	Poecilia_mexicana
ENSMAMG00000011569	chd7	50	93.410	ENSPREG00000014744	chd7	96	77.907	Poecilia_reticulata
ENSMAMG00000011569	chd7	67	79.728	ENSPPYG00000018618	CHD7	73	79.567	Pongo_abelii
ENSMAMG00000011569	chd7	65	76.836	ENSPCAG00000000227	CHD7	71	74.760	Procavia_capensis
ENSMAMG00000011569	chd7	68	79.647	ENSPCOG00000013850	CHD7	72	79.487	Propithecus_coquereli
ENSMAMG00000011569	chd7	65	82.448	ENSPVAG00000011873	CHD7	68	82.353	Pteropus_vampyrus
ENSMAMG00000011569	chd7	75	80.241	ENSPNYG00000012490	chd7	99	80.378	Pundamilia_nyererei
ENSMAMG00000011569	chd7	60	77.932	ENSPNAG00000011245	chd7	93	75.276	Pygocentrus_nattereri
ENSMAMG00000011569	chd7	91	76.667	ENSRNOG00000006689	Chd7	73	79.808	Rattus_norvegicus
ENSMAMG00000011569	chd7	59	67.017	ENSRNOG00000025011	Chd8	59	68.864	Rattus_norvegicus
ENSMAMG00000011569	chd7	59	62.644	ENSRBIG00000039239	CHD8	65	64.308	Rhinopithecus_bieti
ENSMAMG00000011569	chd7	66	78.531	ENSRBIG00000043575	CHD7	72	78.491	Rhinopithecus_bieti
ENSMAMG00000011569	chd7	67	79.567	ENSRROG00000008981	CHD7	72	79.407	Rhinopithecus_roxellana
ENSMAMG00000011569	chd7	59	66.867	ENSRROG00000044285	CHD8	66	68.864	Rhinopithecus_roxellana
ENSMAMG00000011569	chd7	68	79.728	ENSSBOG00000021462	CHD7	72	79.567	Saimiri_boliviensis_boliviensis
ENSMAMG00000011569	chd7	68	80.128	ENSSHAG00000011522	CHD7	72	79.968	Sarcophilus_harrisii
ENSMAMG00000011569	chd7	75	77.242	ENSSFOG00015015077	chd7	73	75.925	Scleropages_formosus
ENSMAMG00000011569	chd7	100	84.540	ENSSDUG00000013773	chd7	100	85.099	Seriola_dumerili
ENSMAMG00000011569	chd7	50	59.179	ENSSLDG00000001679	chd8	60	64.808	Seriola_lalandi_dorsalis
ENSMAMG00000011569	chd7	52	81.386	ENSSARG00000003387	CHD7	67	82.485	Sorex_araneus
ENSMAMG00000011569	chd7	76	77.630	ENSSPUG00000009235	CHD7	89	77.769	Sphenodon_punctatus
ENSMAMG00000011569	chd7	75	87.703	ENSSPAG00000006320	chd7	99	87.057	Stegastes_partitus
ENSMAMG00000011569	chd7	87	78.365	ENSSSCG00000006231	CHD7	73	79.407	Sus_scrofa
ENSMAMG00000011569	chd7	67	79.615	ENSTGUG00000011196	CHD7	73	70.310	Taeniopygia_guttata
ENSMAMG00000011569	chd7	68	80.256	ENSTRUG00000008632	chd7	99	80.864	Takifugu_rubripes
ENSMAMG00000011569	chd7	60	82.462	ENSTNIG00000002647	chd7	99	82.413	Tetraodon_nigroviridis
ENSMAMG00000011569	chd7	83	77.376	ENSTTRG00000004221	CHD7	68	77.376	Tursiops_truncatus
ENSMAMG00000011569	chd7	69	76.904	ENSUAMG00000025734	CHD7	94	76.548	Ursus_americanus
ENSMAMG00000011569	chd7	54	66.617	ENSUMAG00000004045	CHD8	71	72.444	Ursus_maritimus
ENSMAMG00000011569	chd7	80	79.006	ENSUMAG00000010436	CHD7	89	77.649	Ursus_maritimus
ENSMAMG00000011569	chd7	63	79.728	ENSVVUG00000018063	CHD7	72	79.567	Vulpes_vulpes
ENSMAMG00000011569	chd7	70	78.774	ENSXETG00000026004	chd8	76	70.625	Xenopus_tropicalis
ENSMAMG00000011569	chd7	100	79.501	ENSXMAG00000018590	chd7	99	81.424	Xiphophorus_maculatus