EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000011606 (Gene tree)
Gene ID: 113126116
Gene Symbol: pum1
Alias: fb96a03|si:ch211-285e16.1|wu:fb96a03|wu:fb96a08|zgc:63671
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 20328 bases
Position: chrOOHQ01000103.1:11143244-11163571
Accession: 113126116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000017187	PUF	PF00806.19	1.2e-69	1	8
ENSMAMP00000017187	PUF	PF00806.19	1.2e-69	2	8
ENSMAMP00000017187	PUF	PF00806.19	1.2e-69	3	8
ENSMAMP00000017187	PUF	PF00806.19	1.2e-69	4	8
ENSMAMP00000017187	PUF	PF00806.19	1.2e-69	5	8
ENSMAMP00000017187	PUF	PF00806.19	1.2e-69	6	8
ENSMAMP00000017187	PUF	PF00806.19	1.2e-69	7	8
ENSMAMP00000017187	PUF	PF00806.19	1.2e-69	8	8
ENSMAMP00000017200	PUF	PF00806.19	2.6e-59	1	7
ENSMAMP00000017200	PUF	PF00806.19	2.6e-59	2	7
ENSMAMP00000017200	PUF	PF00806.19	2.6e-59	3	7
ENSMAMP00000017200	PUF	PF00806.19	2.6e-59	4	7
ENSMAMP00000017200	PUF	PF00806.19	2.6e-59	5	7
ENSMAMP00000017200	PUF	PF00806.19	2.6e-59	6	7
ENSMAMP00000017200	PUF	PF00806.19	2.6e-59	7	7
ENSMAMP00000017212	PUF	PF00806.19	1.2e-52	1	6
ENSMAMP00000017212	PUF	PF00806.19	1.2e-52	2	6
ENSMAMP00000017212	PUF	PF00806.19	1.2e-52	3	6
ENSMAMP00000017212	PUF	PF00806.19	1.2e-52	4	6
ENSMAMP00000017212	PUF	PF00806.19	1.2e-52	5	6
ENSMAMP00000017212	PUF	PF00806.19	1.2e-52	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000017663	-	3099	-	ENSMAMP00000017200	1032 (aa)	-	-
ENSMAMT00000017650	-	3882	XM_026299950	ENSMAMP00000017187	1163 (aa)	XP_026155735	UPI000E465397
ENSMAMT00000017675	-	3660	-	ENSMAMP00000017212	1066 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000011606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000011606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000011606	pum1	100	62.386	ENSMAMG00000006121	pum2	95	64.069

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000011606	pum1	94	90.843	ENSG00000134644	PUM1	98	91.325	Homo_sapiens
ENSMAMG00000011606	pum1	100	98.882	ENSAPOG00000021632	pum1	100	98.882	Acanthochromis_polyacanthus
ENSMAMG00000011606	pum1	100	76.485	ENSAMEG00000017656	PUM1	97	74.545	Ailuropoda_melanoleuca
ENSMAMG00000011606	pum1	100	97.850	ENSACIG00000021013	pum1	100	97.850	Amphilophus_citrinellus
ENSMAMG00000011606	pum1	100	98.882	ENSAOCG00000003944	pum1	100	98.882	Amphiprion_ocellaris
ENSMAMG00000011606	pum1	100	98.882	ENSAPEG00000014550	pum1	100	98.882	Amphiprion_percula
ENSMAMG00000011606	pum1	100	98.624	ENSATEG00000016004	pum1	100	98.795	Anabas_testudineus
ENSMAMG00000011606	pum1	100	77.044	ENSAPLG00000009351	PUM1	100	74.938	Anas_platyrhynchos
ENSMAMG00000011606	pum1	100	76.407	ENSACAG00000000682	PUM1	98	76.076	Anolis_carolinensis
ENSMAMG00000011606	pum1	93	90.602	ENSANAG00000027865	PUM1	100	91.084	Aotus_nancymaae
ENSMAMG00000011606	pum1	100	93.084	ENSACLG00000019354	pum1	100	98.122	Astatotilapia_calliptera
ENSMAMG00000011606	pum1	100	82.034	ENSAMXG00000020607	pum1	96	81.864	Astyanax_mexicanus
ENSMAMG00000011606	pum1	94	91.325	ENSBTAG00000018979	PUM1	100	91.807	Bos_taurus
ENSMAMG00000011606	pum1	94	90.843	ENSCJAG00000006035	PUM1	100	81.064	Callithrix_jacchus
ENSMAMG00000011606	pum1	100	75.668	ENSCAFG00020024616	PUM1	98	81.188	Canis_lupus_dingo
ENSMAMG00000011606	pum1	94	90.843	ENSCHIG00000012952	PUM1	100	91.325	Capra_hircus
ENSMAMG00000011606	pum1	100	76.301	ENSTSYG00000008868	PUM1	100	82.169	Carlito_syrichta
ENSMAMG00000011606	pum1	100	76.135	ENSCPOG00000031613	PUM1	100	80.817	Cavia_porcellus
ENSMAMG00000011606	pum1	94	91.325	ENSCATG00000017991	PUM1	93	91.807	Cercocebus_atys
ENSMAMG00000011606	pum1	94	90.602	ENSCLAG00000007662	PUM1	100	81.725	Chinchilla_lanigera
ENSMAMG00000011606	pum1	100	75.368	ENSCSAG00000001028	PUM1	100	73.443	Chlorocebus_sabaeus
ENSMAMG00000011606	pum1	92	67.470	ENSCHOG00000010245	PUM1	93	65.700	Choloepus_hoffmanni
ENSMAMG00000011606	pum1	94	91.807	ENSCPBG00000009288	PUM1	98	91.857	Chrysemys_picta_bellii
ENSMAMG00000011606	pum1	94	90.843	ENSCANG00000042606	PUM1	100	91.325	Colobus_angolensis_palliatus
ENSMAMG00000011606	pum1	100	75.517	ENSCGRG00001024949	Pum1	100	82.695	Cricetulus_griseus_chok1gshd
ENSMAMG00000011606	pum1	100	75.517	ENSCGRG00000014197	Pum1	100	82.695	Cricetulus_griseus_crigri
ENSMAMG00000011606	pum1	100	90.112	ENSCSEG00000015981	pum1	100	96.626	Cynoglossus_semilaevis
ENSMAMG00000011606	pum1	100	97.334	ENSCVAG00000007043	pum1	100	97.334	Cyprinodon_variegatus
ENSMAMG00000011606	pum1	100	83.827	ENSDARG00000099256	pum1	100	81.102	Danio_rerio
ENSMAMG00000011606	pum1	100	76.631	ENSDNOG00000010939	PUM1	100	74.690	Dasypus_novemcinctus
ENSMAMG00000011606	pum1	98	70.270	ENSETEG00000004355	PUM1	87	71.415	Echinops_telfairi
ENSMAMG00000011606	pum1	100	76.612	ENSEASG00005010813	PUM1	100	74.586	Equus_asinus_asinus
ENSMAMG00000011606	pum1	100	76.466	ENSECAG00000021369	PUM1	100	74.442	Equus_caballus
ENSMAMG00000011606	pum1	76	90.222	ENSEEUG00000003871	PUM1	74	90.667	Erinaceus_europaeus
ENSMAMG00000011606	pum1	100	89.164	ENSELUG00000002409	pum1	100	93.220	Esox_lucius
ENSMAMG00000011606	pum1	99	84.034	ENSFCAG00000010374	PUM1	100	81.188	Felis_catus
ENSMAMG00000011606	pum1	100	76.727	ENSFALG00000001214	PUM1	97	74.712	Ficedula_albicollis
ENSMAMG00000011606	pum1	100	76.053	ENSFDAG00000011319	PUM1	100	80.693	Fukomys_damarensis
ENSMAMG00000011606	pum1	100	90.614	ENSGMOG00000010491	pum1	100	90.188	Gadus_morhua
ENSMAMG00000011606	pum1	96	89.940	ENSGALG00000042598	PUM1	99	89.940	Gallus_gallus
ENSMAMG00000011606	pum1	100	97.334	ENSGAFG00000015617	pum1	100	97.831	Gambusia_affinis
ENSMAMG00000011606	pum1	99	96.483	ENSGACG00000005717	pum1	100	96.379	Gasterosteus_aculeatus
ENSMAMG00000011606	pum1	96	90.141	ENSGAGG00000001290	PUM1	99	90.141	Gopherus_agassizii
ENSMAMG00000011606	pum1	94	90.843	ENSGGOG00000011983	PUM1	100	91.325	Gorilla_gorilla
ENSMAMG00000011606	pum1	100	98.280	ENSHBUG00000018718	pum1	100	98.280	Haplochromis_burtoni
ENSMAMG00000011606	pum1	100	76.053	ENSHGLG00000013819	Pum1	100	80.693	Heterocephalus_glaber_female
ENSMAMG00000011606	pum1	100	76.053	ENSHGLG00100008621	Pum1	100	80.693	Heterocephalus_glaber_male
ENSMAMG00000011606	pum1	100	85.634	ENSHCOG00000005149	pum1	100	88.743	Hippocampus_comes
ENSMAMG00000011606	pum1	100	81.285	ENSIPUG00000020421	pum1	100	80.960	Ictalurus_punctatus
ENSMAMG00000011606	pum1	100	76.446	ENSSTOG00000010757	PUM1	100	81.064	Ictidomys_tridecemlineatus
ENSMAMG00000011606	pum1	100	76.446	ENSJJAG00000000530	Pum1	100	81.188	Jaculus_jaculus
ENSMAMG00000011606	pum1	100	97.764	ENSKMAG00000003481	pum1	100	97.764	Kryptolebias_marmoratus
ENSMAMG00000011606	pum1	100	97.506	ENSLBEG00000002527	pum1	100	97.506	Labrus_bergylta
ENSMAMG00000011606	pum1	100	75.267	ENSLACG00000017188	PUM1	99	72.848	Latimeria_chalumnae
ENSMAMG00000011606	pum1	100	81.833	ENSLOCG00000005210	pum1	99	80.833	Lepisosteus_oculatus
ENSMAMG00000011606	pum1	100	76.515	ENSLAFG00000003178	PUM1	100	74.896	Loxodonta_africana
ENSMAMG00000011606	pum1	94	91.325	ENSMFAG00000010291	PUM1	100	91.807	Macaca_fascicularis
ENSMAMG00000011606	pum1	94	90.843	ENSMMUG00000013520	PUM1	100	91.325	Macaca_mulatta
ENSMAMG00000011606	pum1	94	90.843	ENSMNEG00000034639	PUM1	100	91.325	Macaca_nemestrina
ENSMAMG00000011606	pum1	94	90.843	ENSMLEG00000038743	PUM1	100	91.325	Mandrillus_leucophaeus
ENSMAMG00000011606	pum1	100	98.280	ENSMZEG00005005834	pum1	100	98.280	Maylandia_zebra
ENSMAMG00000011606	pum1	100	77.190	ENSMGAG00000000724	PUM1	100	76.722	Meleagris_gallopavo
ENSMAMG00000011606	pum1	100	76.261	ENSMAUG00000022090	Pum1	100	83.168	Mesocricetus_auratus
ENSMAMG00000011606	pum1	94	90.843	ENSMICG00000007713	-	100	91.325	Microcebus_murinus
ENSMAMG00000011606	pum1	94	90.144	ENSMICG00000012213	-	100	88.675	Microcebus_murinus
ENSMAMG00000011606	pum1	100	75.702	ENSMOCG00000015463	Pum1	100	82.818	Microtus_ochrogaster
ENSMAMG00000011606	pum1	93	91.566	ENSMMOG00000019817	pum1	100	91.566	Mola_mola
ENSMAMG00000011606	pum1	100	76.553	ENSMODG00000017067	PUM1	100	74.689	Monodelphis_domestica
ENSMAMG00000011606	pum1	100	75.372	MGP_CAROLIEiJ_G0026549	Pum1	100	80.693	Mus_caroli
ENSMAMG00000011606	pum1	100	75.372	ENSMUSG00000028580	Pum1	100	80.569	Mus_musculus
ENSMAMG00000011606	pum1	100	75.289	MGP_PahariEiJ_G0028881	Pum1	100	80.569	Mus_pahari
ENSMAMG00000011606	pum1	100	75.868	MGP_SPRETEiJ_G0027529	Pum1	100	80.569	Mus_spretus
ENSMAMG00000011606	pum1	100	76.694	ENSMPUG00000015454	PUM1	100	74.586	Mustela_putorius_furo
ENSMAMG00000011606	pum1	100	76.301	ENSMLUG00000006490	PUM1	100	74.194	Myotis_lucifugus
ENSMAMG00000011606	pum1	100	76.529	ENSNGAG00000002378	Pum1	100	81.064	Nannospalax_galili
ENSMAMG00000011606	pum1	79	98.250	ENSNBRG00000010689	pum1	100	98.250	Neolamprologus_brichardi
ENSMAMG00000011606	pum1	94	87.711	ENSNLEG00000001151	PUM1	100	88.193	Nomascus_leucogenys
ENSMAMG00000011606	pum1	73	78.448	ENSMEUG00000000976	-	67	80.228	Notamacropus_eugenii
ENSMAMG00000011606	pum1	81	91.589	ENSOPRG00000001776	PUM1	70	91.589	Ochotona_princeps
ENSMAMG00000011606	pum1	100	76.198	ENSODEG00000003465	PUM1	100	80.817	Octodon_degus
ENSMAMG00000011606	pum1	100	98.624	ENSONIG00000002290	pum1	100	98.624	Oreochromis_niloticus
ENSMAMG00000011606	pum1	85	63.535	ENSOANG00000004902	-	100	61.235	Ornithorhynchus_anatinus
ENSMAMG00000011606	pum1	99	76.344	ENSOCUG00000008641	PUM1	99	74.316	Oryctolagus_cuniculus
ENSMAMG00000011606	pum1	100	97.429	ENSORLG00000011482	pum1	100	97.429	Oryzias_latipes
ENSMAMG00000011606	pum1	100	97.429	ENSORLG00020019461	pum1	100	97.429	Oryzias_latipes_hni
ENSMAMG00000011606	pum1	100	97.429	ENSORLG00015011375	pum1	100	97.429	Oryzias_latipes_hsok
ENSMAMG00000011606	pum1	95	91.566	ENSOMEG00000009312	pum1	100	98.072	Oryzias_melastigma
ENSMAMG00000011606	pum1	100	73.902	ENSOGAG00000011063	PUM1	100	71.950	Otolemur_garnettii
ENSMAMG00000011606	pum1	94	90.843	ENSOARG00000001899	PUM1	100	91.325	Ovis_aries
ENSMAMG00000011606	pum1	94	90.843	ENSPPAG00000044003	PUM1	100	91.325	Pan_paniscus
ENSMAMG00000011606	pum1	100	76.529	ENSPPRG00000001370	PUM1	100	81.188	Panthera_pardus
ENSMAMG00000011606	pum1	100	76.364	ENSPTIG00000010798	PUM1	100	81.436	Panthera_tigris_altaica
ENSMAMG00000011606	pum1	94	90.843	ENSPTRG00000000453	PUM1	100	91.325	Pan_troglodytes
ENSMAMG00000011606	pum1	94	91.325	ENSPANG00000016338	PUM1	100	91.807	Papio_anubis
ENSMAMG00000011606	pum1	100	79.052	ENSPKIG00000010578	pum1	100	77.269	Paramormyrops_kingsleyae
ENSMAMG00000011606	pum1	100	77.261	ENSPSIG00000014118	PUM1	100	75.083	Pelodiscus_sinensis
ENSMAMG00000011606	pum1	79	98.305	ENSPMGG00000005836	pum1	100	98.305	Periophthalmus_magnuspinnatus
ENSMAMG00000011606	pum1	100	76.261	ENSPEMG00000010009	Pum1	100	83.168	Peromyscus_maniculatus_bairdii
ENSMAMG00000011606	pum1	94	91.807	ENSPCIG00000014151	PUM1	100	91.566	Phascolarctos_cinereus
ENSMAMG00000011606	pum1	95	96.945	ENSPFOG00000007289	pum1	99	97.377	Poecilia_formosa
ENSMAMG00000011606	pum1	100	94.565	ENSPLAG00000007256	pum1	100	97.460	Poecilia_latipinna
ENSMAMG00000011606	pum1	100	92.019	ENSPMEG00000019543	pum1	99	96.919	Poecilia_mexicana
ENSMAMG00000011606	pum1	100	97.248	ENSPREG00000005195	pum1	100	97.458	Poecilia_reticulata
ENSMAMG00000011606	pum1	100	74.959	ENSPPYG00000001621	PUM1	100	73.052	Pongo_abelii
ENSMAMG00000011606	pum1	76	93.210	ENSPCAG00000001979	PUM1	73	93.210	Procavia_capensis
ENSMAMG00000011606	pum1	94	90.843	ENSPCOG00000004398	PUM1	100	91.325	Propithecus_coquereli
ENSMAMG00000011606	pum1	100	74.607	ENSPVAG00000005207	PUM1	97	72.659	Pteropus_vampyrus
ENSMAMG00000011606	pum1	100	98.366	ENSPNYG00000009518	pum1	100	98.366	Pundamilia_nyererei
ENSMAMG00000011606	pum1	100	82.662	ENSPNAG00000026728	pum1	100	81.864	Pygocentrus_nattereri
ENSMAMG00000011606	pum1	100	75.620	ENSRNOG00000011709	Pum1	100	74.255	Rattus_norvegicus
ENSMAMG00000011606	pum1	94	91.325	ENSRBIG00000042521	PUM1	100	91.807	Rhinopithecus_bieti
ENSMAMG00000011606	pum1	94	90.843	ENSRROG00000020156	PUM1	100	91.325	Rhinopithecus_roxellana
ENSMAMG00000011606	pum1	94	90.843	ENSSBOG00000032037	PUM1	100	91.325	Saimiri_boliviensis_boliviensis
ENSMAMG00000011606	pum1	100	76.636	ENSSHAG00000010918	PUM1	100	74.772	Sarcophilus_harrisii
ENSMAMG00000011606	pum1	100	97.248	ENSSMAG00000010918	pum1	100	97.248	Scophthalmus_maximus
ENSMAMG00000011606	pum1	100	98.882	ENSSDUG00000009021	pum1	100	98.882	Seriola_dumerili
ENSMAMG00000011606	pum1	94	98.730	ENSSLDG00000009667	pum1	100	98.730	Seriola_lalandi_dorsalis
ENSMAMG00000011606	pum1	94	85.577	ENSSARG00000003055	PUM1	88	79.395	Sorex_araneus
ENSMAMG00000011606	pum1	100	77.025	ENSSPUG00000006267	PUM1	100	74.917	Sphenodon_punctatus
ENSMAMG00000011606	pum1	100	98.882	ENSSPAG00000016636	pum1	100	98.882	Stegastes_partitus
ENSMAMG00000011606	pum1	100	88.531	ENSSSCG00000003591	PUM1	100	91.807	Sus_scrofa
ENSMAMG00000011606	pum1	100	97.506	ENSTRUG00000013121	pum1	100	99.153	Takifugu_rubripes
ENSMAMG00000011606	pum1	100	96.667	ENSTNIG00000016983	pum1	99	96.667	Tetraodon_nigroviridis
ENSMAMG00000011606	pum1	97	90.244	ENSTBEG00000013810	PUM1	89	90.244	Tupaia_belangeri
ENSMAMG00000011606	pum1	100	75.741	ENSTTRG00000007436	PUM1	88	76.937	Tursiops_truncatus
ENSMAMG00000011606	pum1	99	74.977	ENSUAMG00000018262	-	100	72.645	Ursus_americanus
ENSMAMG00000011606	pum1	92	83.580	ENSVPAG00000005902	PUM1	92	81.559	Vicugna_pacos
ENSMAMG00000011606	pum1	100	76.548	ENSVVUG00000014631	PUM1	100	76.225	Vulpes_vulpes
ENSMAMG00000011606	pum1	100	74.283	ENSXETG00000012904	pum1	99	71.878	Xenopus_tropicalis
ENSMAMG00000011606	pum1	100	97.334	ENSXMAG00000002945	pum1	100	97.460	Xiphophorus_maculatus