EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000011620 (Gene tree)
Gene ID: 113123418
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 26774 bases
Position: chrOOHQ01000093.1:5488338-5515111
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000017188	KH_1	PF00013.29	8.2e-49	1	3
ENSMAMP00000017188	KH_1	PF00013.29	8.2e-49	2	3
ENSMAMP00000017188	KH_1	PF00013.29	8.2e-49	3	3
ENSMAMP00000017188	KH_2	PF07650.17	4.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000017651	-	951	-	ENSMAMP00000017188	316 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000011620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000011620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000011620	-	77	52.857	ENSMAMG00000001787	hnrnpk	56	52.857
ENSMAMG00000011620	-	95	64.052	ENSMAMG00000010163	pcbp4	64	64.052
ENSMAMG00000011620	-	91	36.923	ENSMAMG00000013259	fubp3	75	36.923
ENSMAMG00000011620	-	67	35.211	ENSMAMG00000023639	KHSRP	53	35.211
ENSMAMG00000011620	-	97	76.849	ENSMAMG00000024156	pcbp2	97	76.849
ENSMAMG00000011620	-	73	40.845	ENSMAMG00000021272	nova1	50	40.845
ENSMAMG00000011620	-	97	95.082	ENSMAMG00000022336	pcbp3	93	95.082
ENSMAMG00000011620	-	94	61.280	ENSMAMG00000011364	-	71	61.280
ENSMAMG00000011620	-	72	39.706	ENSMAMG00000011746	khsrp	56	39.706
ENSMAMG00000011620	-	78	52.055	ENSMAMG00000016975	hnrpkl	61	52.857
ENSMAMG00000011620	-	95	72.026	ENSMAMG00000014389	zgc:110045	98	72.026
ENSMAMG00000011620	-	92	32.653	ENSMAMG00000000969	igf2bp2b	62	32.653
ENSMAMG00000011620	-	97	77.955	ENSMAMG00000010416	PCBP2	97	77.955

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000011620	-	100	96.296	ENSAPOG00000016582	-	100	96.296	Acanthochromis_polyacanthus
ENSMAMG00000011620	-	99	93.610	ENSAPOG00000020003	pcbp3	89	93.610	Acanthochromis_polyacanthus
ENSMAMG00000011620	-	98	88.889	ENSAMEG00000001697	-	99	84.770	Ailuropoda_melanoleuca
ENSMAMG00000011620	-	100	95.692	ENSACIG00000002739	-	100	95.692	Amphilophus_citrinellus
ENSMAMG00000011620	-	99	86.982	ENSACIG00000010933	pcbp3	98	86.982	Amphilophus_citrinellus
ENSMAMG00000011620	-	97	93.871	ENSAOCG00000008592	-	98	93.871	Amphiprion_ocellaris
ENSMAMG00000011620	-	89	94.198	ENSAOCG00000007806	-	100	94.198	Amphiprion_ocellaris
ENSMAMG00000011620	-	100	97.492	ENSAPEG00000005209	-	100	97.492	Amphiprion_percula
ENSMAMG00000011620	-	97	86.607	ENSAPEG00000008011	pcbp3	95	86.607	Amphiprion_percula
ENSMAMG00000011620	-	100	98.734	ENSATEG00000009833	-	100	98.734	Anabas_testudineus
ENSMAMG00000011620	-	97	88.720	ENSATEG00000015787	-	100	88.720	Anabas_testudineus
ENSMAMG00000011620	-	95	75.852	ENSAPLG00000008951	-	79	75.852	Anas_platyrhynchos
ENSMAMG00000011620	-	98	90.549	ENSAPLG00000002975	-	98	90.549	Anas_platyrhynchos
ENSMAMG00000011620	-	99	81.818	ENSACAG00000009819	-	99	81.818	Anolis_carolinensis
ENSMAMG00000011620	-	98	83.193	ENSACAG00000004607	-	99	83.193	Anolis_carolinensis
ENSMAMG00000011620	-	75	96.218	ENSANAG00000030702	-	100	96.218	Aotus_nancymaae
ENSMAMG00000011620	-	99	84.928	ENSACLG00000011835	pcbp3	98	84.928	Astatotilapia_calliptera
ENSMAMG00000011620	-	100	97.152	ENSACLG00000003801	-	100	97.152	Astatotilapia_calliptera
ENSMAMG00000011620	-	95	69.538	ENSAMXG00000001760	zgc:110045	72	69.538	Astyanax_mexicanus
ENSMAMG00000011620	-	97	88.323	ENSAMXG00000003440	pcbp3	95	88.323	Astyanax_mexicanus
ENSMAMG00000011620	-	97	93.115	ENSAMXG00000013588	-	100	93.115	Astyanax_mexicanus
ENSMAMG00000011620	-	90	93.013	ENSCAFG00020019472	-	81	93.013	Canis_lupus_dingo
ENSMAMG00000011620	-	98	94.586	ENSCSAG00000007440	-	89	94.586	Chlorocebus_sabaeus
ENSMAMG00000011620	-	95	94.737	ENSCPBG00000012151	-	99	88.922	Chrysemys_picta_bellii
ENSMAMG00000011620	-	96	81.571	ENSCPBG00000000733	-	73	81.571	Chrysemys_picta_bellii
ENSMAMG00000011620	-	97	93.770	ENSCSEG00000000822	pcbp3	99	93.770	Cynoglossus_semilaevis
ENSMAMG00000011620	-	100	79.240	ENSCSEG00000016984	-	100	79.240	Cynoglossus_semilaevis
ENSMAMG00000011620	-	97	86.310	ENSCVAG00000014482	pcbp3	95	86.310	Cyprinodon_variegatus
ENSMAMG00000011620	-	100	96.238	ENSCVAG00000005262	-	100	96.238	Cyprinodon_variegatus
ENSMAMG00000011620	-	100	89.244	ENSDARG00000054378	pcbp3	100	89.244	Danio_rerio
ENSMAMG00000011620	-	98	83.121	ENSETEG00000015988	-	98	83.121	Echinops_telfairi
ENSMAMG00000011620	-	91	67.480	ENSEBUG00000005495	pcbp3	73	67.480	Eptatretus_burgeri
ENSMAMG00000011620	-	88	73.571	ENSEBUG00000016192	pcbp3	99	73.978	Eptatretus_burgeri
ENSMAMG00000011620	-	97	79.180	ENSEBUG00000007485	-	92	78.995	Eptatretus_burgeri
ENSMAMG00000011620	-	97	94.534	ENSELUG00000001560	-	99	84.615	Esox_lucius
ENSMAMG00000011620	-	98	89.137	ENSELUG00000003521	pcbp3	98	89.137	Esox_lucius
ENSMAMG00000011620	-	95	76.136	ENSFALG00000004411	-	74	76.136	Ficedula_albicollis
ENSMAMG00000011620	-	98	93.949	ENSFALG00000003949	-	98	93.949	Ficedula_albicollis
ENSMAMG00000011620	-	97	94.805	ENSFHEG00000016615	pcbp3	96	94.805	Fundulus_heteroclitus
ENSMAMG00000011620	-	100	96.552	ENSFHEG00000006539	-	100	96.552	Fundulus_heteroclitus
ENSMAMG00000011620	-	97	77.612	ENSGMOG00000011992	pcbp3	97	77.612	Gadus_morhua
ENSMAMG00000011620	-	96	69.486	ENSGMOG00000008611	-	100	69.486	Gadus_morhua
ENSMAMG00000011620	-	96	82.569	ENSGALG00000013155	-	99	82.569	Gallus_gallus
ENSMAMG00000011620	-	98	83.944	ENSGALG00000004394	-	98	89.130	Gallus_gallus
ENSMAMG00000011620	-	97	95.177	ENSGAFG00000010274	-	95	95.177	Gambusia_affinis
ENSMAMG00000011620	-	100	84.751	ENSGAFG00000011430	pcbp3	99	84.751	Gambusia_affinis
ENSMAMG00000011620	-	100	88.889	ENSGACG00000002266	-	100	88.889	Gasterosteus_aculeatus
ENSMAMG00000011620	-	100	76.648	ENSGACG00000014955	-	100	76.648	Gasterosteus_aculeatus
ENSMAMG00000011620	-	84	89.888	ENSGAGG00000000271	-	100	89.888	Gopherus_agassizii
ENSMAMG00000011620	-	77	89.730	ENSGAGG00000006956	-	76	89.730	Gopherus_agassizii
ENSMAMG00000011620	-	100	97.152	ENSHBUG00000021782	-	100	97.152	Haplochromis_burtoni
ENSMAMG00000011620	-	97	93.548	ENSHBUG00000010697	pcbp3	98	93.548	Haplochromis_burtoni
ENSMAMG00000011620	-	97	86.567	ENSHCOG00000017868	pcbp3	95	86.567	Hippocampus_comes
ENSMAMG00000011620	-	100	90.343	ENSHCOG00000006067	-	100	90.343	Hippocampus_comes
ENSMAMG00000011620	-	100	96.203	ENSIPUG00000006238	pcbp3	100	96.203	Ictalurus_punctatus
ENSMAMG00000011620	-	97	86.607	ENSKMAG00000003046	pcbp3	95	86.607	Kryptolebias_marmoratus
ENSMAMG00000011620	-	97	94.212	ENSKMAG00000018530	-	100	90.184	Kryptolebias_marmoratus
ENSMAMG00000011620	-	99	93.610	ENSLBEG00000006201	pcbp3	98	93.610	Labrus_bergylta
ENSMAMG00000011620	-	100	83.282	ENSLBEG00000006542	-	100	83.282	Labrus_bergylta
ENSMAMG00000011620	-	96	75.921	ENSLACG00000010804	zgc:110045	74	75.921	Latimeria_chalumnae
ENSMAMG00000011620	-	95	81.143	ENSLACG00000010386	pcbp3	74	81.143	Latimeria_chalumnae
ENSMAMG00000011620	-	95	81.346	ENSLOCG00000005058	zgc:110045	80	81.346	Lepisosteus_oculatus
ENSMAMG00000011620	-	98	88.922	ENSLOCG00000009369	pcbp3	99	88.922	Lepisosteus_oculatus
ENSMAMG00000011620	-	99	85.714	ENSMZEG00005008993	pcbp3	98	86.527	Maylandia_zebra
ENSMAMG00000011620	-	97	88.959	ENSMZEG00005014882	-	100	85.507	Maylandia_zebra
ENSMAMG00000011620	-	95	76.136	ENSMGAG00000006794	-	74	76.136	Meleagris_gallopavo
ENSMAMG00000011620	-	94	78.841	ENSMGAG00000001883	-	95	79.130	Meleagris_gallopavo
ENSMAMG00000011620	-	97	91.346	ENSMMOG00000000730	pcbp3	88	91.346	Mola_mola
ENSMAMG00000011620	-	100	96.835	ENSMMOG00000005216	-	100	96.835	Mola_mola
ENSMAMG00000011620	-	72	78.037	ENSMODG00000027884	-	93	78.037	Monodelphis_domestica
ENSMAMG00000011620	-	96	88.415	ENSMALG00000000691	pcbp3	95	88.415	Monopterus_albus
ENSMAMG00000011620	-	98	86.018	ENSMPUG00000001779	-	90	86.018	Mustela_putorius_furo
ENSMAMG00000011620	-	98	88.923	ENSNBRG00000016714	-	99	88.615	Neolamprologus_brichardi
ENSMAMG00000011620	-	99	86.391	ENSNBRG00000016409	-	98	86.391	Neolamprologus_brichardi
ENSMAMG00000011620	-	95	83.721	ENSOPRG00000003431	-	99	83.721	Ochotona_princeps
ENSMAMG00000011620	-	100	95.639	ENSONIG00000004611	-	100	95.639	Oreochromis_niloticus
ENSMAMG00000011620	-	97	81.870	ENSONIG00000012122	-	98	81.870	Oreochromis_niloticus
ENSMAMG00000011620	-	98	94.268	ENSOCUG00000002696	-	89	94.268	Oryctolagus_cuniculus
ENSMAMG00000011620	-	100	95.639	ENSORLG00000022739	-	100	95.639	Oryzias_latipes
ENSMAMG00000011620	-	97	93.871	ENSORLG00000000059	pcbp3	100	93.871	Oryzias_latipes
ENSMAMG00000011620	-	100	96.835	ENSORLG00020006124	-	100	96.835	Oryzias_latipes_hni
ENSMAMG00000011620	-	97	93.871	ENSORLG00020012671	pcbp3	97	93.871	Oryzias_latipes_hni
ENSMAMG00000011620	-	97	93.871	ENSORLG00015000429	pcbp3	97	93.871	Oryzias_latipes_hsok
ENSMAMG00000011620	-	99	93.750	ENSORLG00015008051	-	98	93.750	Oryzias_latipes_hsok
ENSMAMG00000011620	-	91	94.464	ENSOMEG00000020811	pcbp3	99	94.464	Oryzias_melastigma
ENSMAMG00000011620	-	100	96.519	ENSOMEG00000020162	-	100	96.519	Oryzias_melastigma
ENSMAMG00000011620	-	98	81.667	ENSOGAG00000008044	-	99	81.667	Otolemur_garnettii
ENSMAMG00000011620	-	100	96.203	ENSPKIG00000019329	pcbp3	100	96.203	Paramormyrops_kingsleyae
ENSMAMG00000011620	-	78	87.027	ENSPKIG00000020913	-	82	87.027	Paramormyrops_kingsleyae
ENSMAMG00000011620	-	71	81.301	ENSPSIG00000008350	-	68	81.301	Pelodiscus_sinensis
ENSMAMG00000011620	-	98	80.967	ENSPSIG00000014970	-	98	81.571	Pelodiscus_sinensis
ENSMAMG00000011620	-	96	87.048	ENSPMGG00000022383	pcbp3	95	87.048	Periophthalmus_magnuspinnatus
ENSMAMG00000011620	-	77	85.106	ENSPMAG00000004637	-	97	85.106	Petromyzon_marinus
ENSMAMG00000011620	-	97	71.924	ENSPMAG00000004551	pcbp3	91	71.924	Petromyzon_marinus
ENSMAMG00000011620	-	98	87.834	ENSPCIG00000028092	-	99	87.834	Phascolarctos_cinereus
ENSMAMG00000011620	-	100	80.112	ENSPLAG00000011449	pcbp3	91	80.112	Poecilia_latipinna
ENSMAMG00000011620	-	99	92.923	ENSPLAG00000004074	-	92	92.923	Poecilia_latipinna
ENSMAMG00000011620	-	100	83.871	ENSPMEG00000021239	pcbp3	95	86.310	Poecilia_mexicana
ENSMAMG00000011620	-	99	89.645	ENSPMEG00000006653	-	99	89.645	Poecilia_mexicana
ENSMAMG00000011620	-	97	93.115	ENSPREG00000015736	pcbp3	99	93.115	Poecilia_reticulata
ENSMAMG00000011620	-	100	96.835	ENSPREG00000020585	-	100	96.835	Poecilia_reticulata
ENSMAMG00000011620	-	97	93.871	ENSPNYG00000012326	pcbp3	95	93.871	Pundamilia_nyererei
ENSMAMG00000011620	-	100	97.152	ENSPNYG00000013205	-	100	97.152	Pundamilia_nyererei
ENSMAMG00000011620	-	100	95.327	ENSPNAG00000015104	pcbp3	100	95.327	Pygocentrus_nattereri
ENSMAMG00000011620	-	96	93.729	ENSPNAG00000008541	-	98	93.729	Pygocentrus_nattereri
ENSMAMG00000011620	-	98	94.268	ENSRNOG00000001245	Pcbp3	98	94.268	Rattus_norvegicus
ENSMAMG00000011620	-	98	85.890	ENSRBIG00000028177	-	90	85.890	Rhinopithecus_bieti
ENSMAMG00000011620	-	98	88.323	ENSSHAG00000007890	-	99	88.323	Sarcophilus_harrisii
ENSMAMG00000011620	-	97	83.974	ENSSFOG00015007118	-	95	83.974	Scleropages_formosus
ENSMAMG00000011620	-	97	94.855	ENSSFOG00015010205	pcbp3	95	94.855	Scleropages_formosus
ENSMAMG00000011620	-	97	87.126	ENSSFOG00015014706	pcbp3	95	87.126	Scleropages_formosus
ENSMAMG00000011620	-	97	95.410	ENSSMAG00000011929	pcbp3	97	95.410	Scophthalmus_maximus
ENSMAMG00000011620	-	100	97.170	ENSSMAG00000003135	-	100	97.170	Scophthalmus_maximus
ENSMAMG00000011620	-	97	87.879	ENSSDUG00000011608	pcbp3	99	87.879	Seriola_dumerili
ENSMAMG00000011620	-	97	92.605	ENSSDUG00000008502	-	95	92.605	Seriola_dumerili
ENSMAMG00000011620	-	97	95.820	ENSSLDG00000020161	-	95	95.820	Seriola_lalandi_dorsalis
ENSMAMG00000011620	-	97	87.879	ENSSLDG00000008518	pcbp3	99	87.879	Seriola_lalandi_dorsalis
ENSMAMG00000011620	-	95	77.907	ENSSPUG00000013214	-	88	87.958	Sphenodon_punctatus
ENSMAMG00000011620	-	97	77.039	ENSSPAG00000023341	-	95	77.039	Stegastes_partitus
ENSMAMG00000011620	-	89	94.539	ENSSPAG00000004190	-	100	94.539	Stegastes_partitus
ENSMAMG00000011620	-	98	86.012	ENSTGUG00000003316	-	99	86.012	Taeniopygia_guttata
ENSMAMG00000011620	-	98	87.898	ENSTGUG00000008158	-	99	87.898	Taeniopygia_guttata
ENSMAMG00000011620	-	99	92.013	ENSTRUG00000006280	-	99	92.013	Takifugu_rubripes
ENSMAMG00000011620	-	97	90.712	ENSTRUG00000013604	pcbp3	95	90.712	Takifugu_rubripes
ENSMAMG00000011620	-	98	81.793	ENSTTRG00000015075	-	99	81.793	Tursiops_truncatus
ENSMAMG00000011620	-	98	86.527	ENSXETG00000011483	pcbp1	99	86.527	Xenopus_tropicalis
ENSMAMG00000011620	-	90	74.852	ENSXETG00000010491	pcbp2	74	74.852	Xenopus_tropicalis
ENSMAMG00000011620	-	96	86.310	ENSXCOG00000020481	pcbp3	95	86.310	Xiphophorus_couchianus
ENSMAMG00000011620	-	97	95.498	ENSXMAG00000028711	-	100	90.533	Xiphophorus_maculatus
ENSMAMG00000011620	-	97	86.607	ENSXMAG00000008175	pcbp3	95	86.607	Xiphophorus_maculatus