EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000011716 (Gene tree)
Gene ID: 113122153
Gene Symbol: pop4
Alias: zgc:110597
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 5757 bases
Position: chrOOHQ01000075.1:12683620-12689376
Accession: ZDB-GENE-050522-505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000017353	UPF0086	PF01868.16	1.7e-27	1	1
ENSMAMP00000017344	UPF0086	PF01868.16	2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000017809	-	678	-	ENSMAMP00000017344	225 (aa)	-	-
ENSMAMT00000017818	-	672	-	ENSMAMP00000017353	223 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000011716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000011716's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000011716	pop4	91	62.745	ENSG00000105171	POP4	100	73.958	Homo_sapiens
ENSMAMG00000011716	pop4	93	55.238	ENSAMEG00000003172	-	84	57.368	Ailuropoda_melanoleuca
ENSMAMG00000011716	pop4	93	60.096	ENSAMEG00000018329	-	85	63.298	Ailuropoda_melanoleuca
ENSMAMG00000011716	pop4	99	81.081	ENSACIG00000008358	pop4	100	81.081	Amphilophus_citrinellus
ENSMAMG00000011716	pop4	90	86.070	ENSAOCG00000010116	pop4	91	87.166	Amphiprion_ocellaris
ENSMAMG00000011716	pop4	99	83.784	ENSAPEG00000002829	pop4	93	83.784	Amphiprion_percula
ENSMAMG00000011716	pop4	99	85.973	ENSATEG00000013028	pop4	99	85.973	Anabas_testudineus
ENSMAMG00000011716	pop4	91	59.804	ENSAPLG00000014051	POP4	90	62.766	Anas_platyrhynchos
ENSMAMG00000011716	pop4	91	63.235	ENSANAG00000020295	POP4	85	66.489	Aotus_nancymaae
ENSMAMG00000011716	pop4	100	79.372	ENSACLG00000000526	pop4	99	79.186	Astatotilapia_calliptera
ENSMAMG00000011716	pop4	97	69.444	ENSAMXG00000002899	pop4	97	69.444	Astyanax_mexicanus
ENSMAMG00000011716	pop4	93	62.500	ENSBTAG00000002223	POP4	85	66.489	Bos_taurus
ENSMAMG00000011716	pop4	91	62.745	ENSCJAG00000046750	POP4	97	70.286	Callithrix_jacchus
ENSMAMG00000011716	pop4	81	64.444	ENSCAFG00000007630	POP4	98	66.111	Canis_familiaris
ENSMAMG00000011716	pop4	93	61.538	ENSCHIG00000016743	POP4	85	65.957	Capra_hircus
ENSMAMG00000011716	pop4	93	61.502	ENSTSYG00000003488	POP4	85	64.894	Carlito_syrichta
ENSMAMG00000011716	pop4	93	43.868	ENSCAPG00000011105	POP4	82	44.920	Cavia_aperea
ENSMAMG00000011716	pop4	93	61.972	ENSCPOG00000002992	POP4	85	65.426	Cavia_porcellus
ENSMAMG00000011716	pop4	92	51.643	ENSCCAG00000034244	-	85	54.787	Cebus_capucinus
ENSMAMG00000011716	pop4	92	62.037	ENSCCAG00000020285	-	85	65.426	Cebus_capucinus
ENSMAMG00000011716	pop4	91	63.902	ENSCATG00000036022	POP4	100	73.958	Cercocebus_atys
ENSMAMG00000011716	pop4	99	59.910	ENSCLAG00000013162	POP4	85	66.489	Chinchilla_lanigera
ENSMAMG00000011716	pop4	91	63.235	ENSCSAG00000004868	POP4	85	65.957	Chlorocebus_sabaeus
ENSMAMG00000011716	pop4	71	72.727	ENSCHOG00000002071	POP4	64	71.795	Choloepus_hoffmanni
ENSMAMG00000011716	pop4	99	57.919	ENSCPBG00000016132	POP4	99	58.371	Chrysemys_picta_bellii
ENSMAMG00000011716	pop4	85	31.959	ENSCING00000023871	-	81	33.735	Ciona_intestinalis
ENSMAMG00000011716	pop4	88	64.975	ENSCANG00000005924	POP4	92	65.957	Colobus_angolensis_palliatus
ENSMAMG00000011716	pop4	92	62.679	ENSCGRG00001017185	Pop4	84	65.957	Cricetulus_griseus_chok1gshd
ENSMAMG00000011716	pop4	92	62.679	ENSCGRG00000008155	Pop4	84	65.957	Cricetulus_griseus_crigri
ENSMAMG00000011716	pop4	99	71.622	ENSCSEG00000002946	pop4	100	72.072	Cynoglossus_semilaevis
ENSMAMG00000011716	pop4	99	57.014	ENSCVAG00000018602	POP4	98	54.018	Cyprinodon_variegatus
ENSMAMG00000011716	pop4	99	68.778	ENSDARG00000101472	pop4	99	69.683	Danio_rerio
ENSMAMG00000011716	pop4	92	60.648	ENSDNOG00000047663	POP4	75	64.894	Dasypus_novemcinctus
ENSMAMG00000011716	pop4	68	61.184	ENSDORG00000008577	Pop4	82	62.238	Dipodomys_ordii
ENSMAMG00000011716	pop4	98	48.402	ENSETEG00000003607	POP4	86	52.660	Echinops_telfairi
ENSMAMG00000011716	pop4	98	39.485	ENSEBUG00000004305	pop4	63	50.000	Eptatretus_burgeri
ENSMAMG00000011716	pop4	99	41.704	ENSEBUG00000008575	pop4	67	50.000	Eptatretus_burgeri
ENSMAMG00000011716	pop4	95	44.444	ENSEBUG00000010447	pop4	58	56.376	Eptatretus_burgeri
ENSMAMG00000011716	pop4	93	65.385	ENSECAG00000020206	POP4	70	65.385	Equus_caballus
ENSMAMG00000011716	pop4	66	74.026	ENSEEUG00000013109	POP4	93	44.681	Erinaceus_europaeus
ENSMAMG00000011716	pop4	99	68.778	ENSELUG00000019812	pop4	99	69.231	Esox_lucius
ENSMAMG00000011716	pop4	92	59.722	ENSFCAG00000001619	POP4	85	64.362	Felis_catus
ENSMAMG00000011716	pop4	99	58.559	ENSFALG00000000206	POP4	98	59.459	Ficedula_albicollis
ENSMAMG00000011716	pop4	92	62.037	ENSFDAG00000017859	POP4	85	65.957	Fukomys_damarensis
ENSMAMG00000011716	pop4	96	69.626	ENSFHEG00000012745	pop4	85	75.401	Fundulus_heteroclitus
ENSMAMG00000011716	pop4	90	70.792	ENSGMOG00000000335	pop4	89	75.978	Gadus_morhua
ENSMAMG00000011716	pop4	100	55.605	ENSGALG00000041972	POP4	93	56.502	Gallus_gallus
ENSMAMG00000011716	pop4	79	72.881	ENSGAFG00000003571	pop4	98	72.881	Gambusia_affinis
ENSMAMG00000011716	pop4	99	80.995	ENSGACG00000014510	pop4	100	85.326	Gasterosteus_aculeatus
ENSMAMG00000011716	pop4	99	58.371	ENSGAGG00000024544	POP4	79	59.276	Gopherus_agassizii
ENSMAMG00000011716	pop4	91	63.235	ENSGGOG00000038346	POP4	85	65.957	Gorilla_gorilla
ENSMAMG00000011716	pop4	99	79.186	ENSHBUG00000021821	pop4	99	79.186	Haplochromis_burtoni
ENSMAMG00000011716	pop4	93	62.441	ENSHGLG00000015798	POP4	85	65.957	Heterocephalus_glaber_female
ENSMAMG00000011716	pop4	93	62.441	ENSHGLG00100009737	POP4	85	65.957	Heterocephalus_glaber_male
ENSMAMG00000011716	pop4	99	75.566	ENSHCOG00000020937	pop4	99	75.566	Hippocampus_comes
ENSMAMG00000011716	pop4	99	65.315	ENSIPUG00000013652	pop4	99	65.315	Ictalurus_punctatus
ENSMAMG00000011716	pop4	93	62.500	ENSSTOG00000011016	POP4	85	65.957	Ictidomys_tridecemlineatus
ENSMAMG00000011716	pop4	96	59.031	ENSJJAG00000013376	Pop4	85	65.957	Jaculus_jaculus
ENSMAMG00000011716	pop4	99	81.900	ENSKMAG00000012250	pop4	99	81.900	Kryptolebias_marmoratus
ENSMAMG00000011716	pop4	99	75.113	ENSLBEG00000014139	pop4	99	75.113	Labrus_bergylta
ENSMAMG00000011716	pop4	99	74.661	ENSLBEG00000018846	-	99	74.661	Labrus_bergylta
ENSMAMG00000011716	pop4	98	56.164	ENSLACG00000008581	POP4	98	57.078	Latimeria_chalumnae
ENSMAMG00000011716	pop4	99	64.253	ENSLOCG00000005597	pop4	99	64.706	Lepisosteus_oculatus
ENSMAMG00000011716	pop4	93	62.911	ENSLAFG00000000084	POP4	85	66.489	Loxodonta_africana
ENSMAMG00000011716	pop4	91	63.235	ENSMFAG00000029606	POP4	85	65.957	Macaca_fascicularis
ENSMAMG00000011716	pop4	91	62.255	ENSMMUG00000017424	POP4	85	66.489	Macaca_mulatta
ENSMAMG00000011716	pop4	91	62.255	ENSMNEG00000031374	POP4	85	66.489	Macaca_nemestrina
ENSMAMG00000011716	pop4	91	62.745	ENSMLEG00000043454	POP4	85	66.138	Mandrillus_leucophaeus
ENSMAMG00000011716	pop4	99	79.186	ENSMZEG00005002360	pop4	99	79.186	Maylandia_zebra
ENSMAMG00000011716	pop4	96	57.477	ENSMGAG00000005337	POP4	95	58.411	Meleagris_gallopavo
ENSMAMG00000011716	pop4	92	62.679	ENSMAUG00000020110	Pop4	85	64.894	Mesocricetus_auratus
ENSMAMG00000011716	pop4	93	60.096	ENSMICG00000035730	POP4	92	60.766	Microcebus_murinus
ENSMAMG00000011716	pop4	100	79.821	ENSMMOG00000015321	pop4	100	80.269	Mola_mola
ENSMAMG00000011716	pop4	99	59.910	ENSMODG00000029406	POP4	95	60.811	Monodelphis_domestica
ENSMAMG00000011716	pop4	99	87.330	ENSMALG00000012571	pop4	99	87.330	Monopterus_albus
ENSMAMG00000011716	pop4	92	63.636	MGP_CAROLIEiJ_G0029600	Pop4	85	67.021	Mus_caroli
ENSMAMG00000011716	pop4	92	63.636	ENSMUSG00000030423	Pop4	85	65.957	Mus_musculus
ENSMAMG00000011716	pop4	92	63.636	MGP_SPRETEiJ_G0030699	Pop4	84	66.667	Mus_spretus
ENSMAMG00000011716	pop4	92	52.074	ENSMPUG00000008063	-	81	57.838	Mustela_putorius_furo
ENSMAMG00000011716	pop4	93	60.577	ENSMPUG00000008041	-	85	64.362	Mustela_putorius_furo
ENSMAMG00000011716	pop4	96	46.977	ENSMLUG00000010774	POP4	81	51.351	Myotis_lucifugus
ENSMAMG00000011716	pop4	56	70.400	ENSMEUG00000003636	-	100	71.200	Notamacropus_eugenii
ENSMAMG00000011716	pop4	88	64.975	ENSOPRG00000004736	POP4	93	66.138	Ochotona_princeps
ENSMAMG00000011716	pop4	93	61.972	ENSODEG00000013025	POP4	88	65.957	Octodon_degus
ENSMAMG00000011716	pop4	100	79.821	ENSONIG00000003458	pop4	98	79.821	Oreochromis_niloticus
ENSMAMG00000011716	pop4	92	61.574	ENSOCUG00000015974	POP4	85	66.489	Oryctolagus_cuniculus
ENSMAMG00000011716	pop4	100	78.027	ENSORLG00000020317	pop4	100	78.027	Oryzias_latipes
ENSMAMG00000011716	pop4	99	78.281	ENSORLG00015011624	pop4	99	78.281	Oryzias_latipes_hsok
ENSMAMG00000011716	pop4	99	74.661	ENSOMEG00000002538	pop4	99	74.661	Oryzias_melastigma
ENSMAMG00000011716	pop4	93	62.981	ENSOGAG00000011168	POP4	94	63.636	Otolemur_garnettii
ENSMAMG00000011716	pop4	94	59.729	ENSOARG00000004041	POP4	84	65.957	Ovis_aries
ENSMAMG00000011716	pop4	91	63.235	ENSPPAG00000040372	POP4	85	66.489	Pan_paniscus
ENSMAMG00000011716	pop4	92	59.722	ENSPPRG00000010502	POP4	85	64.362	Panthera_pardus
ENSMAMG00000011716	pop4	92	59.722	ENSPTIG00000016598	POP4	85	64.362	Panthera_tigris_altaica
ENSMAMG00000011716	pop4	91	63.235	ENSPTRG00000010779	POP4	85	66.489	Pan_troglodytes
ENSMAMG00000011716	pop4	91	63.235	ENSPANG00000008546	POP4	85	65.957	Papio_anubis
ENSMAMG00000011716	pop4	91	69.307	ENSPKIG00000004468	pop4	82	70.745	Paramormyrops_kingsleyae
ENSMAMG00000011716	pop4	100	57.848	ENSPSIG00000015690	POP4	100	63.235	Pelodiscus_sinensis
ENSMAMG00000011716	pop4	91	65.865	ENSPMGG00000008608	pop4	99	62.617	Periophthalmus_magnuspinnatus
ENSMAMG00000011716	pop4	92	53.846	ENSPEMG00000019982	-	83	55.080	Peromyscus_maniculatus_bairdii
ENSMAMG00000011716	pop4	99	60.909	ENSPEMG00000014034	-	86	65.957	Peromyscus_maniculatus_bairdii
ENSMAMG00000011716	pop4	65	66.897	ENSPMAG00000006265	pop4	73	66.897	Petromyzon_marinus
ENSMAMG00000011716	pop4	99	59.729	ENSPCIG00000024738	POP4	95	59.729	Phascolarctos_cinereus
ENSMAMG00000011716	pop4	99	74.208	ENSPFOG00000000925	pop4	99	74.208	Poecilia_formosa
ENSMAMG00000011716	pop4	99	73.756	ENSPLAG00000003161	pop4	99	73.756	Poecilia_latipinna
ENSMAMG00000011716	pop4	99	74.208	ENSPMEG00000002475	pop4	99	74.208	Poecilia_mexicana
ENSMAMG00000011716	pop4	100	73.094	ENSPREG00000022403	pop4	94	71.749	Poecilia_reticulata
ENSMAMG00000011716	pop4	91	63.235	ENSPPYG00000009805	POP4	85	66.489	Pongo_abelii
ENSMAMG00000011716	pop4	89	63.636	ENSPCAG00000007737	POP4	85	64.894	Procavia_capensis
ENSMAMG00000011716	pop4	93	61.538	ENSPCOG00000018055	POP4	94	62.019	Propithecus_coquereli
ENSMAMG00000011716	pop4	96	61.111	ENSPVAG00000006069	POP4	85	65.263	Pteropus_vampyrus
ENSMAMG00000011716	pop4	99	79.186	ENSPNYG00000020038	pop4	99	79.186	Pundamilia_nyererei
ENSMAMG00000011716	pop4	99	67.421	ENSPNAG00000005591	pop4	99	67.421	Pygocentrus_nattereri
ENSMAMG00000011716	pop4	91	62.745	ENSRNOG00000027646	Pop4	85	66.489	Rattus_norvegicus
ENSMAMG00000011716	pop4	72	60.870	ENSRBIG00000044769	POP4	84	67.424	Rhinopithecus_bieti
ENSMAMG00000011716	pop4	91	63.235	ENSRROG00000028903	POP4	85	65.957	Rhinopithecus_roxellana
ENSMAMG00000011716	pop4	57	33.094	YBR257W	-	50	33.094	Saccharomyces_cerevisiae
ENSMAMG00000011716	pop4	92	62.500	ENSSBOG00000032445	POP4	85	65.957	Saimiri_boliviensis_boliviensis
ENSMAMG00000011716	pop4	99	59.545	ENSSHAG00000016888	POP4	99	59.545	Sarcophilus_harrisii
ENSMAMG00000011716	pop4	99	65.778	ENSSFOG00015014556	pop4	98	65.778	Scleropages_formosus
ENSMAMG00000011716	pop4	99	82.353	ENSSMAG00000016611	pop4	99	82.353	Scophthalmus_maximus
ENSMAMG00000011716	pop4	99	84.685	ENSSDUG00000019865	pop4	89	84.685	Seriola_dumerili
ENSMAMG00000011716	pop4	99	84.234	ENSSLDG00000001763	pop4	99	84.234	Seriola_lalandi_dorsalis
ENSMAMG00000011716	pop4	93	62.981	ENSSARG00000004748	POP4	86	67.021	Sorex_araneus
ENSMAMG00000011716	pop4	99	88.235	ENSSPAG00000014364	pop4	99	87.838	Stegastes_partitus
ENSMAMG00000011716	pop4	93	62.911	ENSSSCG00000002854	POP4	85	64.894	Sus_scrofa
ENSMAMG00000011716	pop4	90	60.697	ENSTGUG00000008953	POP4	93	63.298	Taeniopygia_guttata
ENSMAMG00000011716	pop4	91	75.000	ENSTNIG00000006401	pop4	100	75.000	Tetraodon_nigroviridis
ENSMAMG00000011716	pop4	93	64.423	ENSTBEG00000002194	POP4	85	67.196	Tupaia_belangeri
ENSMAMG00000011716	pop4	93	60.577	ENSTTRG00000005882	POP4	97	60.648	Tursiops_truncatus
ENSMAMG00000011716	pop4	93	60.096	ENSUAMG00000003049	-	85	63.830	Ursus_americanus
ENSMAMG00000011716	pop4	93	60.096	ENSUMAG00000007522	-	85	63.830	Ursus_maritimus
ENSMAMG00000011716	pop4	88	62.944	ENSVVUG00000016876	-	65	64.894	Vulpes_vulpes
ENSMAMG00000011716	pop4	96	57.009	ENSXETG00000017598	pop4	96	58.411	Xenopus_tropicalis
ENSMAMG00000011716	pop4	100	73.661	ENSXCOG00000017695	pop4	94	73.661	Xiphophorus_couchianus
ENSMAMG00000011716	pop4	100	73.661	ENSXMAG00000013862	pop4	94	73.661	Xiphophorus_maculatus