EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAMG00000011739 (Gene tree)
Gene ID: 113141888
Gene Symbol: snd1
Alias: SN4TDR|TDRD11|p100L|p100S|wu:fc27g10
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 146195 bases
Position: chrOOHQ01000056.1:10895955-11042149
Accession: 113141888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000017333	TUDOR	PF00567.24	5e-27	1	1
ENSMAMP00000017352	TUDOR	PF00567.24	8.2e-27	1	1
ENSMAMP00000017352	SNase	PF00565.17	2.5e-68	1	4
ENSMAMP00000017352	SNase	PF00565.17	2.5e-68	2	4
ENSMAMP00000017352	SNase	PF00565.17	2.5e-68	3	4
ENSMAMP00000017352	SNase	PF00565.17	2.5e-68	4	4
ENSMAMP00000017333	SNase	PF00565.17	2e-65	1	4
ENSMAMP00000017333	SNase	PF00565.17	2e-65	2	4
ENSMAMP00000017333	SNase	PF00565.17	2e-65	3	4
ENSMAMP00000017333	SNase	PF00565.17	2e-65	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000017798	-	6820	-	ENSMAMP00000017333	911 (aa)	-	-
ENSMAMT00000017817	-	4104	XM_026326508	ENSMAMP00000017352	910 (aa)	XP_026182293	UPI000E46266C

Gene Model

Click here to download ENSMAMG00000011739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000011739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000011739	snd1	98	84.375	ENSG00000197157	SND1	99	83.682	Homo_sapiens
ENSMAMG00000011739	snd1	100	95.719	ENSAPOG00000017599	snd1	100	95.719	Acanthochromis_polyacanthus
ENSMAMG00000011739	snd1	100	83.260	ENSAMEG00000004664	SND1	94	83.260	Ailuropoda_melanoleuca
ENSMAMG00000011739	snd1	100	92.206	ENSACIG00000003551	snd1	100	92.206	Amphilophus_citrinellus
ENSMAMG00000011739	snd1	100	95.609	ENSAOCG00000014166	snd1	100	95.609	Amphiprion_ocellaris
ENSMAMG00000011739	snd1	100	95.609	ENSAPEG00000007067	snd1	100	95.609	Amphiprion_percula
ENSMAMG00000011739	snd1	98	95.759	ENSATEG00000018475	snd1	90	95.759	Anabas_testudineus
ENSMAMG00000011739	snd1	98	84.487	ENSANAG00000034463	SND1	99	84.537	Aotus_nancymaae
ENSMAMG00000011739	snd1	100	95.060	ENSACLG00000022897	snd1	100	95.060	Astatotilapia_calliptera
ENSMAMG00000011739	snd1	99	89.890	ENSAMXG00000016318	snd1	99	89.890	Astyanax_mexicanus
ENSMAMG00000011739	snd1	98	84.598	ENSBTAG00000010692	SND1	99	83.903	Bos_taurus
ENSMAMG00000011739	snd1	99	47.419	WBGene00006626	tsn-1	99	47.742	Caenorhabditis_elegans
ENSMAMG00000011739	snd1	98	84.375	ENSCJAG00000017668	SND1	99	84.424	Callithrix_jacchus
ENSMAMG00000011739	snd1	100	83.553	ENSCAFG00000001700	SND1	100	83.553	Canis_familiaris
ENSMAMG00000011739	snd1	100	83.553	ENSCAFG00020021639	SND1	100	83.553	Canis_lupus_dingo
ENSMAMG00000011739	snd1	98	84.487	ENSCHIG00000023390	SND1	99	83.793	Capra_hircus
ENSMAMG00000011739	snd1	70	87.895	ENSTSYG00000004979	SND1	96	87.895	Carlito_syrichta
ENSMAMG00000011739	snd1	99	73.678	ENSCAPG00000010677	SND1	99	73.678	Cavia_aperea
ENSMAMG00000011739	snd1	98	84.263	ENSCPOG00000006251	SND1	99	83.572	Cavia_porcellus
ENSMAMG00000011739	snd1	98	84.598	ENSCCAG00000036847	SND1	99	83.903	Cebus_capucinus
ENSMAMG00000011739	snd1	98	84.598	ENSCATG00000035214	SND1	99	84.650	Cercocebus_atys
ENSMAMG00000011739	snd1	98	84.598	ENSCLAG00000011796	SND1	97	86.294	Chinchilla_lanigera
ENSMAMG00000011739	snd1	98	84.598	ENSCSAG00000010182	SND1	99	83.903	Chlorocebus_sabaeus
ENSMAMG00000011739	snd1	78	74.510	ENSCHOG00000002218	SND1	86	74.510	Choloepus_hoffmanni
ENSMAMG00000011739	snd1	100	83.425	ENSCPBG00000018094	SND1	100	83.425	Chrysemys_picta_bellii
ENSMAMG00000011739	snd1	98	56.589	ENSCING00000000524	-	98	56.589	Ciona_intestinalis
ENSMAMG00000011739	snd1	99	56.489	ENSCSAVG00000008807	-	99	56.489	Ciona_savignyi
ENSMAMG00000011739	snd1	98	84.598	ENSCANG00000035119	SND1	99	83.903	Colobus_angolensis_palliatus
ENSMAMG00000011739	snd1	98	84.263	ENSCGRG00001022514	Snd1	97	86.464	Cricetulus_griseus_chok1gshd
ENSMAMG00000011739	snd1	97	84.312	ENSCGRG00000012277	Snd1	99	84.312	Cricetulus_griseus_crigri
ENSMAMG00000011739	snd1	100	92.755	ENSCSEG00000008661	snd1	100	92.755	Cynoglossus_semilaevis
ENSMAMG00000011739	snd1	100	94.512	ENSCVAG00000010316	snd1	100	94.512	Cyprinodon_variegatus
ENSMAMG00000011739	snd1	100	89.485	ENSDARG00000006766	snd1	99	91.358	Danio_rerio
ENSMAMG00000011739	snd1	97	82.340	ENSDNOG00000006795	SND1	100	82.340	Dasypus_novemcinctus
ENSMAMG00000011739	snd1	98	84.375	ENSDORG00000000336	Snd1	99	83.682	Dipodomys_ordii
ENSMAMG00000011739	snd1	98	50.868	FBgn0035121	Tudor-SN	99	50.536	Drosophila_melanogaster
ENSMAMG00000011739	snd1	90	91.667	ENSETEG00000000375	SND1	92	91.667	Echinops_telfairi
ENSMAMG00000011739	snd1	60	64.660	ENSEBUG00000014201	-	84	76.630	Eptatretus_burgeri
ENSMAMG00000011739	snd1	98	83.205	ENSEASG00005008513	SND1	99	82.538	Equus_asinus_asinus
ENSMAMG00000011739	snd1	98	84.375	ENSECAG00000011451	SND1	99	83.682	Equus_caballus
ENSMAMG00000011739	snd1	98	75.223	ENSEEUG00000014737	SND1	99	74.286	Erinaceus_europaeus
ENSMAMG00000011739	snd1	99	88.681	ENSELUG00000001805	snd1	96	88.681	Esox_lucius
ENSMAMG00000011739	snd1	100	83.443	ENSFCAG00000008289	SND1	100	83.443	Felis_catus
ENSMAMG00000011739	snd1	98	84.040	ENSFDAG00000015881	SND1	99	83.352	Fukomys_damarensis
ENSMAMG00000011739	snd1	100	92.374	ENSFHEG00000004093	snd1	99	93.970	Fundulus_heteroclitus
ENSMAMG00000011739	snd1	75	83.333	ENSGMOG00000018932	snd1	66	83.333	Gadus_morhua
ENSMAMG00000011739	snd1	100	94.731	ENSGAFG00000008421	snd1	100	94.731	Gambusia_affinis
ENSMAMG00000011739	snd1	100	60.478	ENSGACG00000019793	snd1	100	60.478	Gasterosteus_aculeatus
ENSMAMG00000011739	snd1	98	84.598	ENSGGOG00000009614	SND1	99	84.650	Gorilla_gorilla
ENSMAMG00000011739	snd1	100	94.951	ENSHBUG00000019135	snd1	100	94.951	Haplochromis_burtoni
ENSMAMG00000011739	snd1	98	84.040	ENSHGLG00000003618	SND1	97	86.125	Heterocephalus_glaber_female
ENSMAMG00000011739	snd1	99	83.352	ENSHGLG00100012449	SND1	99	83.352	Heterocephalus_glaber_male
ENSMAMG00000011739	snd1	100	91.877	ENSHCOG00000005266	snd1	100	91.877	Hippocampus_comes
ENSMAMG00000011739	snd1	99	89.133	ENSIPUG00000013279	snd1	99	89.133	Ictalurus_punctatus
ENSMAMG00000011739	snd1	98	84.487	ENSSTOG00000002140	SND1	99	83.793	Ictidomys_tridecemlineatus
ENSMAMG00000011739	snd1	98	84.375	ENSJJAG00000009561	Snd1	99	83.682	Jaculus_jaculus
ENSMAMG00000011739	snd1	100	95.170	ENSKMAG00000016997	snd1	100	95.170	Kryptolebias_marmoratus
ENSMAMG00000011739	snd1	100	92.865	ENSLBEG00000013563	snd1	100	92.865	Labrus_bergylta
ENSMAMG00000011739	snd1	98	88.742	ENSLOCG00000015537	snd1	99	88.030	Lepisosteus_oculatus
ENSMAMG00000011739	snd1	99	83.846	ENSLAFG00000009696	SND1	99	83.846	Loxodonta_africana
ENSMAMG00000011739	snd1	98	84.598	ENSMFAG00000038114	SND1	99	84.650	Macaca_fascicularis
ENSMAMG00000011739	snd1	98	84.598	ENSMMUG00000015432	SND1	99	83.903	Macaca_mulatta
ENSMAMG00000011739	snd1	98	84.598	ENSMNEG00000039808	SND1	97	88.007	Macaca_nemestrina
ENSMAMG00000011739	snd1	98	84.487	ENSMLEG00000029040	SND1	97	88.007	Mandrillus_leucophaeus
ENSMAMG00000011739	snd1	100	95.060	ENSMZEG00005005681	snd1	100	95.060	Maylandia_zebra
ENSMAMG00000011739	snd1	98	84.487	ENSMICG00000000097	SND1	99	83.793	Microcebus_murinus
ENSMAMG00000011739	snd1	98	84.710	ENSMOCG00000005040	Snd1	99	84.013	Microtus_ochrogaster
ENSMAMG00000011739	snd1	100	94.182	ENSMMOG00000001795	snd1	100	94.182	Mola_mola
ENSMAMG00000011739	snd1	98	83.594	ENSMODG00000015182	SND1	99	82.911	Monodelphis_domestica
ENSMAMG00000011739	snd1	100	94.841	ENSMALG00000012071	snd1	100	94.841	Monopterus_albus
ENSMAMG00000011739	snd1	98	84.263	MGP_CAROLIEiJ_G0028159	Snd1	98	86.102	Mus_caroli
ENSMAMG00000011739	snd1	98	84.040	ENSMUSG00000001424	Snd1	99	84.411	Mus_musculus
ENSMAMG00000011739	snd1	98	84.263	MGP_PahariEiJ_G0021917	Snd1	99	86.102	Mus_pahari
ENSMAMG00000011739	snd1	98	84.263	MGP_SPRETEiJ_G0029159	Snd1	99	84.743	Mus_spretus
ENSMAMG00000011739	snd1	100	83.461	ENSMPUG00000006545	SND1	100	83.461	Mustela_putorius_furo
ENSMAMG00000011739	snd1	97	83.389	ENSMLUG00000017130	SND1	99	83.389	Myotis_lucifugus
ENSMAMG00000011739	snd1	98	84.487	ENSNGAG00000011186	Snd1	99	83.793	Nannospalax_galili
ENSMAMG00000011739	snd1	100	95.060	ENSNBRG00000006681	snd1	100	95.060	Neolamprologus_brichardi
ENSMAMG00000011739	snd1	98	84.598	ENSNLEG00000012263	SND1	97	87.910	Nomascus_leucogenys
ENSMAMG00000011739	snd1	91	91.667	ENSOPRG00000013405	SND1	92	91.667	Ochotona_princeps
ENSMAMG00000011739	snd1	98	84.487	ENSODEG00000011502	SND1	100	83.425	Octodon_degus
ENSMAMG00000011739	snd1	100	95.170	ENSONIG00000011481	snd1	97	95.170	Oreochromis_niloticus
ENSMAMG00000011739	snd1	98	83.258	ENSOANG00000000817	SND1	98	83.258	Ornithorhynchus_anatinus
ENSMAMG00000011739	snd1	98	83.929	ENSOCUG00000001620	SND1	98	83.929	Oryctolagus_cuniculus
ENSMAMG00000011739	snd1	100	93.414	ENSORLG00000015201	snd1	100	93.414	Oryzias_latipes
ENSMAMG00000011739	snd1	100	93.633	ENSORLG00020013991	snd1	100	93.633	Oryzias_latipes_hni
ENSMAMG00000011739	snd1	100	93.633	ENSORLG00015012436	snd1	100	93.633	Oryzias_latipes_hsok
ENSMAMG00000011739	snd1	100	93.743	ENSOMEG00000006406	snd1	100	93.743	Oryzias_melastigma
ENSMAMG00000011739	snd1	98	84.410	ENSOGAG00000013356	SND1	94	83.718	Otolemur_garnettii
ENSMAMG00000011739	snd1	97	82.187	ENSOARG00000002149	SND1	100	82.187	Ovis_aries
ENSMAMG00000011739	snd1	98	84.487	ENSPPAG00000042947	SND1	99	83.929	Pan_paniscus
ENSMAMG00000011739	snd1	100	83.443	ENSPPRG00000004494	SND1	100	83.443	Panthera_pardus
ENSMAMG00000011739	snd1	100	83.333	ENSPTIG00000014214	SND1	100	83.333	Panthera_tigris_altaica
ENSMAMG00000011739	snd1	98	84.487	ENSPTRG00000023911	SND1	99	84.537	Pan_troglodytes
ENSMAMG00000011739	snd1	97	84.650	ENSPANG00000011997	SND1	99	84.650	Papio_anubis
ENSMAMG00000011739	snd1	99	86.329	ENSPKIG00000023494	snd1	99	85.932	Paramormyrops_kingsleyae
ENSMAMG00000011739	snd1	92	94.491	ENSPMGG00000003629	snd1	100	94.491	Periophthalmus_magnuspinnatus
ENSMAMG00000011739	snd1	98	84.487	ENSPEMG00000010240	Snd1	99	83.793	Peromyscus_maniculatus_bairdii
ENSMAMG00000011739	snd1	97	74.041	ENSPMAG00000007915	-	99	74.041	Petromyzon_marinus
ENSMAMG00000011739	snd1	98	84.040	ENSPCIG00000011561	SND1	99	83.352	Phascolarctos_cinereus
ENSMAMG00000011739	snd1	100	94.292	ENSPFOG00000001557	snd1	100	94.292	Poecilia_formosa
ENSMAMG00000011739	snd1	100	94.292	ENSPLAG00000018459	snd1	97	94.292	Poecilia_latipinna
ENSMAMG00000011739	snd1	100	94.512	ENSPMEG00000006803	snd1	100	94.512	Poecilia_mexicana
ENSMAMG00000011739	snd1	100	94.621	ENSPREG00000002189	snd1	100	94.621	Poecilia_reticulata
ENSMAMG00000011739	snd1	91	91.667	ENSPPYG00000017972	SND1	99	91.667	Pongo_abelii
ENSMAMG00000011739	snd1	98	74.665	ENSPCAG00000011305	SND1	99	73.736	Procavia_capensis
ENSMAMG00000011739	snd1	98	84.598	ENSPCOG00000026791	SND1	100	84.667	Propithecus_coquereli
ENSMAMG00000011739	snd1	98	82.589	ENSPVAG00000013945	SND1	99	81.918	Pteropus_vampyrus
ENSMAMG00000011739	snd1	100	94.951	ENSPNYG00000000932	snd1	100	94.951	Pundamilia_nyererei
ENSMAMG00000011739	snd1	99	90.549	ENSPNAG00000001206	snd1	99	90.549	Pygocentrus_nattereri
ENSMAMG00000011739	snd1	98	84.152	ENSRNOG00000031173	Snd1	100	83.315	Rattus_norvegicus
ENSMAMG00000011739	snd1	70	88.577	ENSRBIG00000027782	-	93	88.636	Rhinopithecus_bieti
ENSMAMG00000011739	snd1	98	84.598	ENSRROG00000033020	SND1	99	83.903	Rhinopithecus_roxellana
ENSMAMG00000011739	snd1	98	84.487	ENSSBOG00000032461	SND1	99	84.537	Saimiri_boliviensis_boliviensis
ENSMAMG00000011739	snd1	98	80.787	ENSSHAG00000015359	SND1	100	80.787	Sarcophilus_harrisii
ENSMAMG00000011739	snd1	98	88.248	ENSSFOG00015001103	snd1	99	87.364	Scleropages_formosus
ENSMAMG00000011739	snd1	100	93.633	ENSSMAG00000001932	snd1	95	93.633	Scophthalmus_maximus
ENSMAMG00000011739	snd1	100	95.170	ENSSDUG00000002699	snd1	94	95.170	Seriola_dumerili
ENSMAMG00000011739	snd1	100	87.706	ENSSLDG00000001950	snd1	100	87.706	Seriola_lalandi_dorsalis
ENSMAMG00000011739	snd1	86	80.265	ENSSARG00000004877	SND1	92	80.265	Sorex_araneus
ENSMAMG00000011739	snd1	70	80.936	ENSSPUG00000017586	SND1	96	80.936	Sphenodon_punctatus
ENSMAMG00000011739	snd1	73	93.739	ENSSPAG00000021398	snd1	99	93.739	Stegastes_partitus
ENSMAMG00000011739	snd1	98	84.263	ENSSSCG00000016590	SND1	99	83.572	Sus_scrofa
ENSMAMG00000011739	snd1	100	92.953	ENSTRUG00000014067	snd1	100	91.767	Takifugu_rubripes
ENSMAMG00000011739	snd1	100	92.206	ENSTNIG00000011019	snd1	100	92.206	Tetraodon_nigroviridis
ENSMAMG00000011739	snd1	93	78.706	ENSTBEG00000003999	SND1	100	78.706	Tupaia_belangeri
ENSMAMG00000011739	snd1	98	80.022	ENSTTRG00000006059	SND1	99	79.383	Tursiops_truncatus
ENSMAMG00000011739	snd1	87	82.700	ENSUAMG00000005604	-	93	82.700	Ursus_americanus
ENSMAMG00000011739	snd1	69	77.023	ENSUAMG00000002820	-	89	77.023	Ursus_americanus
ENSMAMG00000011739	snd1	100	83.553	ENSUMAG00000005960	SND1	100	83.553	Ursus_maritimus
ENSMAMG00000011739	snd1	77	91.667	ENSVPAG00000008302	SND1	74	91.667	Vicugna_pacos
ENSMAMG00000011739	snd1	100	83.443	ENSVVUG00000007226	SND1	100	83.443	Vulpes_vulpes
ENSMAMG00000011739	snd1	97	80.722	ENSXETG00000023043	snd1	100	80.594	Xenopus_tropicalis
ENSMAMG00000011739	snd1	92	92.280	ENSXCOG00000013629	snd1	99	92.280	Xiphophorus_couchianus
ENSMAMG00000011739	snd1	100	95.170	ENSXMAG00000011469	snd1	100	95.170	Xiphophorus_maculatus