EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000011760 (Gene tree)
Gene ID: 113136265
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 12243 bases
Position: chrOOHQ01000107.1:30453627-30465869
Accession: 113136265
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000017392	GTP_EFTU	PF00009.27	4.4e-63	1	1
ENSMAMP00000017392	GTP_EFTU_D2	PF03144.25	1.2e-16	1	1
ENSMAMP00000017392	EFG_IV	PF03764.18	1.2e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000017858	-	4639	-	ENSMAMP00000017392	748 (aa)	XP_026172715	UPI000E46409B

Gene Model

Click here to download ENSMAMG00000011760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000011760's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000011760	gfm1	73	38.926	ENSMAMG00000019483	-	72	38.926
ENSMAMG00000011760	gfm1	92	34.637	ENSMAMG00000000452	gfm2	99	34.777
ENSMAMG00000011760	gfm1	74	39.597	ENSMAMG00000009410	eef2b	75	39.597

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000011760	gfm1	98	80.136	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSMAMG00000011760	gfm1	93	88.825	ENSAPOG00000016489	gfm1	99	88.825	Acanthochromis_polyacanthus
ENSMAMG00000011760	gfm1	96	81.894	ENSAMEG00000013542	GFM1	100	79.548	Ailuropoda_melanoleuca
ENSMAMG00000011760	gfm1	97	86.069	ENSACIG00000014465	gfm1	94	86.069	Amphilophus_citrinellus
ENSMAMG00000011760	gfm1	100	90.642	ENSAOCG00000006023	gfm1	100	90.642	Amphiprion_ocellaris
ENSMAMG00000011760	gfm1	100	90.374	ENSAPEG00000024499	gfm1	100	90.374	Amphiprion_percula
ENSMAMG00000011760	gfm1	100	91.444	ENSATEG00000013789	gfm1	100	91.444	Anabas_testudineus
ENSMAMG00000011760	gfm1	97	80.276	ENSAPLG00000005022	GFM1	100	80.276	Anas_platyrhynchos
ENSMAMG00000011760	gfm1	97	80.276	ENSACAG00000006829	GFM1	98	80.276	Anolis_carolinensis
ENSMAMG00000011760	gfm1	100	79.095	ENSANAG00000035983	GFM1	100	79.095	Aotus_nancymaae
ENSMAMG00000011760	gfm1	100	91.176	ENSACLG00000016586	gfm1	100	91.176	Astatotilapia_calliptera
ENSMAMG00000011760	gfm1	100	84.626	ENSAMXG00000013435	gfm1	98	85.773	Astyanax_mexicanus
ENSMAMG00000011760	gfm1	96	81.755	ENSBTAG00000027795	GFM1	95	81.755	Bos_taurus
ENSMAMG00000011760	gfm1	94	57.061	WBGene00009246	gfm-1	95	56.742	Caenorhabditis_elegans
ENSMAMG00000011760	gfm1	100	79.095	ENSCJAG00000000363	GFM1	100	79.095	Callithrix_jacchus
ENSMAMG00000011760	gfm1	98	80.790	ENSCAFG00000009006	GFM1	100	81.953	Canis_familiaris
ENSMAMG00000011760	gfm1	98	80.680	ENSCAFG00020005878	GFM1	98	82.173	Canis_lupus_dingo
ENSMAMG00000011760	gfm1	96	82.033	ENSCHIG00000015220	GFM1	95	82.033	Capra_hircus
ENSMAMG00000011760	gfm1	100	79.283	ENSTSYG00000002013	GFM1	100	79.283	Carlito_syrichta
ENSMAMG00000011760	gfm1	96	70.580	ENSCAPG00000005699	GFM1	97	70.580	Cavia_aperea
ENSMAMG00000011760	gfm1	100	78.780	ENSCPOG00000001194	GFM1	100	78.780	Cavia_porcellus
ENSMAMG00000011760	gfm1	100	78.828	ENSCCAG00000025561	GFM1	100	78.828	Cebus_capucinus
ENSMAMG00000011760	gfm1	100	79.228	ENSCATG00000037622	GFM1	100	79.228	Cercocebus_atys
ENSMAMG00000011760	gfm1	97	79.477	ENSCLAG00000002503	GFM1	96	79.477	Chinchilla_lanigera
ENSMAMG00000011760	gfm1	100	79.095	ENSCSAG00000012162	GFM1	100	79.095	Chlorocebus_sabaeus
ENSMAMG00000011760	gfm1	100	70.580	ENSCHOG00000004867	GFM1	100	70.580	Choloepus_hoffmanni
ENSMAMG00000011760	gfm1	100	79.548	ENSCPBG00000018367	GFM1	99	79.548	Chrysemys_picta_bellii
ENSMAMG00000011760	gfm1	94	60.000	ENSCING00000011960	-	93	60.000	Ciona_intestinalis
ENSMAMG00000011760	gfm1	94	61.222	ENSCSAVG00000008514	-	99	59.972	Ciona_savignyi
ENSMAMG00000011760	gfm1	98	79.864	ENSCANG00000031714	GFM1	100	78.828	Colobus_angolensis_palliatus
ENSMAMG00000011760	gfm1	100	78.828	ENSCGRG00001022095	GFM1	100	78.828	Cricetulus_griseus_chok1gshd
ENSMAMG00000011760	gfm1	100	78.828	ENSCGRG00000012043	GFM1	100	78.828	Cricetulus_griseus_crigri
ENSMAMG00000011760	gfm1	97	83.126	ENSCSEG00000017088	gfm1	99	83.126	Cynoglossus_semilaevis
ENSMAMG00000011760	gfm1	100	91.176	ENSCVAG00000004126	gfm1	100	91.176	Cyprinodon_variegatus
ENSMAMG00000011760	gfm1	100	82.219	ENSDARG00000063624	gfm1	100	82.219	Danio_rerio
ENSMAMG00000011760	gfm1	55	79.218	ENSDNOG00000016385	-	100	79.218	Dasypus_novemcinctus
ENSMAMG00000011760	gfm1	99	78.302	ENSDORG00000014165	Gfm1	98	78.302	Dipodomys_ordii
ENSMAMG00000011760	gfm1	95	67.842	FBgn0263133	mEFG1	95	67.842	Drosophila_melanogaster
ENSMAMG00000011760	gfm1	96	73.925	ENSETEG00000019197	GFM1	95	73.925	Echinops_telfairi
ENSMAMG00000011760	gfm1	90	63.650	ENSEBUG00000012794	gfm1	99	63.650	Eptatretus_burgeri
ENSMAMG00000011760	gfm1	96	60.278	ENSEEUG00000000429	GFM1	99	60.278	Erinaceus_europaeus
ENSMAMG00000011760	gfm1	100	85.695	ENSELUG00000014728	gfm1	100	85.695	Esox_lucius
ENSMAMG00000011760	gfm1	97	80.992	ENSFCAG00000013291	GFM1	100	78.912	Felis_catus
ENSMAMG00000011760	gfm1	90	80.889	ENSFALG00000007619	GFM1	100	80.889	Ficedula_albicollis
ENSMAMG00000011760	gfm1	100	78.780	ENSFDAG00000016559	GFM1	100	78.780	Fukomys_damarensis
ENSMAMG00000011760	gfm1	100	89.706	ENSFHEG00000006091	gfm1	100	89.706	Fundulus_heteroclitus
ENSMAMG00000011760	gfm1	97	86.382	ENSGMOG00000010161	gfm1	100	86.382	Gadus_morhua
ENSMAMG00000011760	gfm1	97	80.000	ENSGALG00000009634	GFM1	98	80.000	Gallus_gallus
ENSMAMG00000011760	gfm1	100	89.572	ENSGAFG00000012527	gfm1	100	89.572	Gambusia_affinis
ENSMAMG00000011760	gfm1	99	89.840	ENSGACG00000009864	gfm1	99	89.840	Gasterosteus_aculeatus
ENSMAMG00000011760	gfm1	98	80.408	ENSGGOG00000003085	GFM1	100	79.361	Gorilla_gorilla
ENSMAMG00000011760	gfm1	100	91.310	ENSHBUG00000002120	gfm1	100	91.310	Haplochromis_burtoni
ENSMAMG00000011760	gfm1	98	79.019	ENSHGLG00000016855	GFM1	100	77.851	Heterocephalus_glaber_female
ENSMAMG00000011760	gfm1	98	79.019	ENSHGLG00100013049	GFM1	100	77.851	Heterocephalus_glaber_male
ENSMAMG00000011760	gfm1	100	88.636	ENSHCOG00000007638	gfm1	99	90.179	Hippocampus_comes
ENSMAMG00000011760	gfm1	100	84.893	ENSIPUG00000005873	gfm1	100	84.893	Ictalurus_punctatus
ENSMAMG00000011760	gfm1	97	79.339	ENSSTOG00000010150	GFM1	98	79.339	Ictidomys_tridecemlineatus
ENSMAMG00000011760	gfm1	100	77.896	ENSJJAG00000016447	Gfm1	100	77.896	Jaculus_jaculus
ENSMAMG00000011760	gfm1	100	86.631	ENSKMAG00000020768	gfm1	100	86.631	Kryptolebias_marmoratus
ENSMAMG00000011760	gfm1	94	89.872	ENSLBEG00000021315	gfm1	100	89.872	Labrus_bergylta
ENSMAMG00000011760	gfm1	100	80.214	ENSLACG00000012295	GFM1	100	80.214	Latimeria_chalumnae
ENSMAMG00000011760	gfm1	97	79.207	ENSLOCG00000003778	gfm1	100	79.207	Lepisosteus_oculatus
ENSMAMG00000011760	gfm1	96	79.583	ENSLAFG00000010945	GFM1	99	78.333	Loxodonta_africana
ENSMAMG00000011760	gfm1	100	79.095	ENSMFAG00000035731	GFM1	100	79.095	Macaca_fascicularis
ENSMAMG00000011760	gfm1	100	79.095	ENSMMUG00000004961	GFM1	100	79.095	Macaca_mulatta
ENSMAMG00000011760	gfm1	100	78.961	ENSMNEG00000033245	GFM1	100	78.961	Macaca_nemestrina
ENSMAMG00000011760	gfm1	97	79.172	ENSMLEG00000030908	GFM1	99	78.919	Mandrillus_leucophaeus
ENSMAMG00000011760	gfm1	100	91.310	ENSMZEG00005016639	gfm1	100	91.310	Maylandia_zebra
ENSMAMG00000011760	gfm1	97	80.110	ENSMGAG00000010641	GFM1	97	80.110	Meleagris_gallopavo
ENSMAMG00000011760	gfm1	97	81.103	ENSMAUG00000000611	Gfm1	97	81.103	Mesocricetus_auratus
ENSMAMG00000011760	gfm1	97	81.267	ENSMICG00000049086	GFM1	100	79.310	Microcebus_murinus
ENSMAMG00000011760	gfm1	100	78.695	ENSMOCG00000000465	Gfm1	100	78.695	Microtus_ochrogaster
ENSMAMG00000011760	gfm1	97	90.083	ENSMMOG00000012538	gfm1	98	90.083	Mola_mola
ENSMAMG00000011760	gfm1	99	80.326	ENSMODG00000015673	GFM1	99	80.326	Monodelphis_domestica
ENSMAMG00000011760	gfm1	96	90.516	ENSMALG00000012508	gfm1	95	90.516	Monopterus_albus
ENSMAMG00000011760	gfm1	96	81.729	MGP_CAROLIEiJ_G0025052	Gfm1	95	81.729	Mus_caroli
ENSMAMG00000011760	gfm1	96	81.729	ENSMUSG00000027774	Gfm1	95	81.729	Mus_musculus
ENSMAMG00000011760	gfm1	97	80.828	MGP_PahariEiJ_G0026495	Gfm1	97	80.828	Mus_pahari
ENSMAMG00000011760	gfm1	96	81.729	MGP_SPRETEiJ_G0025994	Gfm1	95	81.729	Mus_spretus
ENSMAMG00000011760	gfm1	100	79.045	ENSMPUG00000002859	GFM1	100	79.045	Mustela_putorius_furo
ENSMAMG00000011760	gfm1	97	81.405	ENSMLUG00000000452	GFM1	96	81.405	Myotis_lucifugus
ENSMAMG00000011760	gfm1	100	78.133	ENSNGAG00000012375	Gfm1	100	78.133	Nannospalax_galili
ENSMAMG00000011760	gfm1	97	91.346	ENSNBRG00000004631	gfm1	99	91.346	Neolamprologus_brichardi
ENSMAMG00000011760	gfm1	97	80.854	ENSNLEG00000004176	GFM1	100	79.095	Nomascus_leucogenys
ENSMAMG00000011760	gfm1	91	72.941	ENSMEUG00000007784	GFM1	99	72.941	Notamacropus_eugenii
ENSMAMG00000011760	gfm1	100	78.238	ENSOPRG00000009860	GFM1	100	78.238	Ochotona_princeps
ENSMAMG00000011760	gfm1	98	79.973	ENSODEG00000004316	GFM1	100	78.780	Octodon_degus
ENSMAMG00000011760	gfm1	100	91.176	ENSONIG00000003772	gfm1	100	91.176	Oreochromis_niloticus
ENSMAMG00000011760	gfm1	98	80.654	ENSOCUG00000013561	GFM1	100	79.178	Oryctolagus_cuniculus
ENSMAMG00000011760	gfm1	95	89.689	ENSORLG00000006487	gfm1	100	89.689	Oryzias_latipes
ENSMAMG00000011760	gfm1	100	88.503	ENSORLG00020003362	gfm1	100	88.503	Oryzias_latipes_hni
ENSMAMG00000011760	gfm1	100	88.503	ENSORLG00015005829	gfm1	100	88.503	Oryzias_latipes_hsok
ENSMAMG00000011760	gfm1	100	89.840	ENSOMEG00000012894	gfm1	100	89.840	Oryzias_melastigma
ENSMAMG00000011760	gfm1	97	80.441	ENSOGAG00000008298	GFM1	96	80.441	Otolemur_garnettii
ENSMAMG00000011760	gfm1	96	81.415	ENSOARG00000002409	GFM1	99	81.415	Ovis_aries
ENSMAMG00000011760	gfm1	98	80.408	ENSPPAG00000033881	GFM1	100	79.361	Pan_paniscus
ENSMAMG00000011760	gfm1	97	80.992	ENSPPRG00000009281	GFM1	100	78.912	Panthera_pardus
ENSMAMG00000011760	gfm1	97	80.854	ENSPTIG00000012416	GFM1	100	78.780	Panthera_tigris_altaica
ENSMAMG00000011760	gfm1	98	80.408	ENSPTRG00000015570	GFM1	100	79.361	Pan_troglodytes
ENSMAMG00000011760	gfm1	100	79.095	ENSPANG00000016512	GFM1	100	79.095	Papio_anubis
ENSMAMG00000011760	gfm1	100	83.957	ENSPKIG00000004876	gfm1	100	83.957	Paramormyrops_kingsleyae
ENSMAMG00000011760	gfm1	100	80.774	ENSPSIG00000012567	GFM1	99	80.774	Pelodiscus_sinensis
ENSMAMG00000011760	gfm1	97	88.414	ENSPMGG00000014068	gfm1	100	88.414	Periophthalmus_magnuspinnatus
ENSMAMG00000011760	gfm1	100	78.828	ENSPEMG00000008942	Gfm1	100	78.828	Peromyscus_maniculatus_bairdii
ENSMAMG00000011760	gfm1	86	78.019	ENSPCIG00000020195	GFM1	95	81.015	Phascolarctos_cinereus
ENSMAMG00000011760	gfm1	100	90.107	ENSPFOG00000011022	gfm1	100	90.107	Poecilia_formosa
ENSMAMG00000011760	gfm1	97	90.608	ENSPLAG00000019585	gfm1	100	89.607	Poecilia_latipinna
ENSMAMG00000011760	gfm1	100	89.973	ENSPMEG00000012376	gfm1	100	89.973	Poecilia_mexicana
ENSMAMG00000011760	gfm1	100	89.840	ENSPREG00000001332	gfm1	95	89.840	Poecilia_reticulata
ENSMAMG00000011760	gfm1	98	80.000	ENSPPYG00000014244	GFM1	100	78.961	Pongo_abelii
ENSMAMG00000011760	gfm1	94	79.374	ENSPCAG00000008934	GFM1	100	79.374	Procavia_capensis
ENSMAMG00000011760	gfm1	98	80.518	ENSPCOG00000022259	GFM1	100	79.045	Propithecus_coquereli
ENSMAMG00000011760	gfm1	97	80.441	ENSPVAG00000013605	GFM1	96	80.441	Pteropus_vampyrus
ENSMAMG00000011760	gfm1	100	91.310	ENSPNYG00000006037	gfm1	100	91.310	Pundamilia_nyererei
ENSMAMG00000011760	gfm1	100	84.492	ENSPNAG00000001237	gfm1	100	84.492	Pygocentrus_nattereri
ENSMAMG00000011760	gfm1	96	81.869	ENSRNOG00000012873	Gfm1	95	81.869	Rattus_norvegicus
ENSMAMG00000011760	gfm1	98	79.864	ENSRBIG00000031363	GFM1	100	78.828	Rhinopithecus_bieti
ENSMAMG00000011760	gfm1	98	80.000	ENSRROG00000031081	GFM1	100	78.961	Rhinopithecus_roxellana
ENSMAMG00000011760	gfm1	96	55.983	YLR069C	-	94	55.983	Saccharomyces_cerevisiae
ENSMAMG00000011760	gfm1	100	79.095	ENSSBOG00000023252	GFM1	100	79.095	Saimiri_boliviensis_boliviensis
ENSMAMG00000011760	gfm1	97	82.434	ENSSHAG00000017772	GFM1	97	82.207	Sarcophilus_harrisii
ENSMAMG00000011760	gfm1	100	84.379	ENSSFOG00015003117	gfm1	100	84.379	Scleropages_formosus
ENSMAMG00000011760	gfm1	100	89.840	ENSSMAG00000013221	gfm1	100	89.840	Scophthalmus_maximus
ENSMAMG00000011760	gfm1	100	92.513	ENSSDUG00000018665	gfm1	100	92.513	Seriola_dumerili
ENSMAMG00000011760	gfm1	100	92.246	ENSSLDG00000020606	gfm1	100	92.246	Seriola_lalandi_dorsalis
ENSMAMG00000011760	gfm1	99	78.155	ENSSPUG00000018686	GFM1	99	78.155	Sphenodon_punctatus
ENSMAMG00000011760	gfm1	100	91.979	ENSSPAG00000008800	gfm1	100	91.979	Stegastes_partitus
ENSMAMG00000011760	gfm1	96	80.919	ENSSSCG00000025651	GFM1	95	80.919	Sus_scrofa
ENSMAMG00000011760	gfm1	100	87.032	ENSTRUG00000009244	gfm1	100	87.032	Takifugu_rubripes
ENSMAMG00000011760	gfm1	100	88.770	ENSTNIG00000007729	gfm1	100	88.770	Tetraodon_nigroviridis
ENSMAMG00000011760	gfm1	90	73.037	ENSTBEG00000017404	GFM1	89	73.037	Tupaia_belangeri
ENSMAMG00000011760	gfm1	96	81.476	ENSTTRG00000001735	GFM1	95	81.476	Tursiops_truncatus
ENSMAMG00000011760	gfm1	97	81.129	ENSUAMG00000026381	GFM1	96	81.129	Ursus_americanus
ENSMAMG00000011760	gfm1	97	81.129	ENSUMAG00000011268	GFM1	96	81.129	Ursus_maritimus
ENSMAMG00000011760	gfm1	97	77.517	ENSVPAG00000009444	GFM1	96	77.517	Vicugna_pacos
ENSMAMG00000011760	gfm1	98	80.601	ENSVVUG00000020091	GFM1	100	81.657	Vulpes_vulpes
ENSMAMG00000011760	gfm1	100	80.984	ENSXETG00000032551	GFM1	100	80.984	Xenopus_tropicalis
ENSMAMG00000011760	gfm1	54	88.337	ENSXCOG00000012590	gfm1	93	88.337	Xiphophorus_couchianus
ENSMAMG00000011760	gfm1	100	90.107	ENSXMAG00000000261	gfm1	100	90.107	Xiphophorus_maculatus