EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000011876 (Gene tree)
Gene ID: 113136315
Gene Symbol: srprb
Alias: wu:fk57h10|zgc:111820|zgc:92746
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 6002 bases
Position: chrOOHQ01000107.1:30469477-30475478
Accession: 113136315
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000017579	MMR_HSR1	PF01926.23	1.6e-07	1	1
ENSMAMP00000017565	MMR_HSR1	PF01926.23	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000018046	-	3994	-	ENSMAMP00000017579	272 (aa)	-	-
ENSMAMT00000018032	-	4581	-	ENSMAMP00000017565	275 (aa)	XP_026172796	UPI000E462865

Gene Model

Click here to download ENSMAMG00000011876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000011876's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000011876	srprb	69	30.319	ENSMAMG00000001681	arf3b	96	30.319
ENSMAMG00000011876	srprb	59	31.250	ENSMAMG00000008079	arf2b	53	31.250
ENSMAMG00000011876	srprb	69	30.319	ENSMAMG00000006781	-	96	30.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000011876	srprb	100	89.892	ENSAPOG00000021219	srprb	100	89.892	Acanthochromis_polyacanthus
ENSMAMG00000011876	srprb	97	90.602	ENSACIG00000014621	srprb	100	90.602	Amphilophus_citrinellus
ENSMAMG00000011876	srprb	100	88.448	ENSAOCG00000017265	srprb	100	88.448	Amphiprion_ocellaris
ENSMAMG00000011876	srprb	100	88.448	ENSAPEG00000024541	srprb	88	88.448	Amphiprion_percula
ENSMAMG00000011876	srprb	100	88.000	ENSATEG00000014016	srprb	100	88.000	Anabas_testudineus
ENSMAMG00000011876	srprb	100	88.406	ENSACLG00000016748	srprb	100	88.406	Astatotilapia_calliptera
ENSMAMG00000011876	srprb	97	70.677	ENSAMXG00000044118	srprb	100	70.677	Astyanax_mexicanus
ENSMAMG00000011876	srprb	100	84.000	ENSCSEG00000017194	srprb	100	84.000	Cynoglossus_semilaevis
ENSMAMG00000011876	srprb	97	87.218	ENSCVAG00000004221	srprb	100	87.218	Cyprinodon_variegatus
ENSMAMG00000011876	srprb	97	68.421	ENSDARG00000030949	srprb	100	68.421	Danio_rerio
ENSMAMG00000011876	srprb	96	80.608	ENSELUG00000009740	srprb	97	80.608	Esox_lucius
ENSMAMG00000011876	srprb	97	87.594	ENSFHEG00000006004	srprb	100	87.594	Fundulus_heteroclitus
ENSMAMG00000011876	srprb	99	79.705	ENSGMOG00000002081	srprb	100	79.705	Gadus_morhua
ENSMAMG00000011876	srprb	96	87.452	ENSGAFG00000012593	srprb	99	87.452	Gambusia_affinis
ENSMAMG00000011876	srprb	99	88.192	ENSGACG00000009891	srprb	100	88.192	Gasterosteus_aculeatus
ENSMAMG00000011876	srprb	100	88.406	ENSHBUG00000002145	srprb	100	88.406	Haplochromis_burtoni
ENSMAMG00000011876	srprb	92	86.561	ENSHCOG00000007732	srprb	95	86.561	Hippocampus_comes
ENSMAMG00000011876	srprb	97	66.292	ENSIPUG00000004177	srprb	100	66.292	Ictalurus_punctatus
ENSMAMG00000011876	srprb	97	87.218	ENSKMAG00000020736	srprb	100	87.218	Kryptolebias_marmoratus
ENSMAMG00000011876	srprb	100	87.273	ENSLBEG00000021483	srprb	100	87.273	Labrus_bergylta
ENSMAMG00000011876	srprb	94	71.154	ENSLOCG00000009740	srprb	87	71.538	Lepisosteus_oculatus
ENSMAMG00000011876	srprb	94	89.189	ENSMZEG00005016621	srprb	100	89.189	Maylandia_zebra
ENSMAMG00000011876	srprb	99	86.716	ENSMMOG00000012550	srprb	100	86.716	Mola_mola
ENSMAMG00000011876	srprb	100	89.091	ENSMALG00000012595	srprb	100	89.091	Monopterus_albus
ENSMAMG00000011876	srprb	76	88.835	ENSNBRG00000004699	srprb	88	88.835	Neolamprologus_brichardi
ENSMAMG00000011876	srprb	100	88.000	ENSONIG00000003788	srprb	82	88.000	Oreochromis_niloticus
ENSMAMG00000011876	srprb	99	83.395	ENSORLG00000006430	srprb	99	83.395	Oryzias_latipes
ENSMAMG00000011876	srprb	100	82.909	ENSORLG00020003413	srprb	100	82.909	Oryzias_latipes_hni
ENSMAMG00000011876	srprb	100	82.909	ENSORLG00015000166	srprb	100	82.909	Oryzias_latipes_hsok
ENSMAMG00000011876	srprb	100	83.636	ENSOMEG00000012735	srprb	100	83.636	Oryzias_melastigma
ENSMAMG00000011876	srprb	91	71.315	ENSPKIG00000013147	srprb	95	71.315	Paramormyrops_kingsleyae
ENSMAMG00000011876	srprb	100	81.091	ENSPMGG00000014061	srprb	100	81.091	Periophthalmus_magnuspinnatus
ENSMAMG00000011876	srprb	96	87.452	ENSPFOG00000011347	srprb	95	87.452	Poecilia_formosa
ENSMAMG00000011876	srprb	94	88.372	ENSPLAG00000001156	srprb	100	88.372	Poecilia_latipinna
ENSMAMG00000011876	srprb	94	87.597	ENSPMEG00000012169	srprb	100	87.597	Poecilia_mexicana
ENSMAMG00000011876	srprb	94	87.597	ENSPREG00000001449	srprb	100	87.597	Poecilia_reticulata
ENSMAMG00000011876	srprb	100	88.406	ENSPNYG00000005911	srprb	100	88.406	Pundamilia_nyererei
ENSMAMG00000011876	srprb	97	71.805	ENSPNAG00000009983	srprb	100	71.805	Pygocentrus_nattereri
ENSMAMG00000011876	srprb	92	75.197	ENSSFOG00015019355	srprb	95	75.197	Scleropages_formosus
ENSMAMG00000011876	srprb	100	90.182	ENSSMAG00000013202	srprb	100	90.182	Scophthalmus_maximus
ENSMAMG00000011876	srprb	100	91.273	ENSSDUG00000018746	srprb	94	91.273	Seriola_dumerili
ENSMAMG00000011876	srprb	100	90.909	ENSSLDG00000020560	srprb	100	90.909	Seriola_lalandi_dorsalis
ENSMAMG00000011876	srprb	100	89.531	ENSSPAG00000008898	srprb	100	89.531	Stegastes_partitus
ENSMAMG00000011876	srprb	100	85.818	ENSTRUG00000022463	srprb	100	85.818	Takifugu_rubripes
ENSMAMG00000011876	srprb	95	84.291	ENSTNIG00000007725	srprb	99	84.291	Tetraodon_nigroviridis
ENSMAMG00000011876	srprb	94	88.372	ENSXCOG00000012585	srprb	100	88.372	Xiphophorus_couchianus
ENSMAMG00000011876	srprb	94	88.372	ENSXMAG00000028725	srprb	100	88.372	Xiphophorus_maculatus