EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000011998 (Gene tree)
Gene ID: -
Gene Symbol: rbm12b
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 1890 bases
Position: chrOOHQ01000075.1:12792681-12794570
Accession: ZDB-GENE-030131-6428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000017745	RRM_1	PF00076.22	1.3e-31	1	3
ENSMAMP00000017745	RRM_1	PF00076.22	1.3e-31	2	3
ENSMAMP00000017745	RRM_1	PF00076.22	1.3e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000018215	-	1890	-	ENSMAMP00000017745	629 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000011998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000011998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000011998	rbm12b	75	33.889	ENSMAMG00000001497	rbm12	73	33.889
ENSMAMG00000011998	rbm12b	74	30.319	ENSMAMG00000012038	zgc:153215	99	30.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000011998	rbm12b	100	42.970	ENSG00000183808	RBM12B	98	78.750	Homo_sapiens
ENSMAMG00000011998	rbm12b	100	67.919	ENSAPOG00000013963	rbm12b	100	67.919	Acanthochromis_polyacanthus
ENSMAMG00000011998	rbm12b	72	31.974	ENSAPOG00000008836	zgc:153215	95	31.974	Acanthochromis_polyacanthus
ENSMAMG00000011998	rbm12b	100	43.177	ENSAMEG00000007134	RBM12B	66	48.052	Ailuropoda_melanoleuca
ENSMAMG00000011998	rbm12b	93	72.000	ENSACIG00000014943	rbm12b	97	72.000	Amphilophus_citrinellus
ENSMAMG00000011998	rbm12b	100	69.122	ENSAOCG00000024270	rbm12b	100	69.906	Amphiprion_ocellaris
ENSMAMG00000011998	rbm12b	73	30.120	ENSAOCG00000010819	zgc:153215	98	31.124	Amphiprion_ocellaris
ENSMAMG00000011998	rbm12b	98	45.436	ENSAPEG00000022079	rbm12b	98	70.100	Amphiprion_percula
ENSMAMG00000011998	rbm12b	100	73.701	ENSATEG00000004578	rbm12b	97	72.713	Anabas_testudineus
ENSMAMG00000011998	rbm12b	100	40.506	ENSAPLG00000002020	RBM12B	100	42.000	Anas_platyrhynchos
ENSMAMG00000011998	rbm12b	96	46.465	ENSACAG00000003463	RBM12B	59	46.465	Anolis_carolinensis
ENSMAMG00000011998	rbm12b	90	43.689	ENSANAG00000034015	RBM12B	70	43.689	Aotus_nancymaae
ENSMAMG00000011998	rbm12b	100	68.224	ENSACLG00000005575	rbm12b	98	67.707	Astatotilapia_calliptera
ENSMAMG00000011998	rbm12b	90	55.471	ENSACLG00000005578	rbm12b	100	54.684	Astatotilapia_calliptera
ENSMAMG00000011998	rbm12b	74	30.210	ENSACLG00000007675	zgc:153215	99	30.210	Astatotilapia_calliptera
ENSMAMG00000011998	rbm12b	100	49.375	ENSAMXG00000041973	rbm12b	100	50.078	Astyanax_mexicanus
ENSMAMG00000011998	rbm12b	74	58.333	ENSAMXG00000020853	zgc:153215	89	41.772	Astyanax_mexicanus
ENSMAMG00000011998	rbm12b	86	49.351	ENSBTAG00000013408	RBM12B	65	49.351	Bos_taurus
ENSMAMG00000011998	rbm12b	86	48.052	ENSCAFG00000009109	RBM12B	57	48.052	Canis_familiaris
ENSMAMG00000011998	rbm12b	86	48.052	ENSCAFG00020012203	RBM12B	64	48.052	Canis_lupus_dingo
ENSMAMG00000011998	rbm12b	74	43.902	ENSCHIG00000006790	RBM12B	67	43.902	Capra_hircus
ENSMAMG00000011998	rbm12b	90	42.772	ENSTSYG00000012515	RBM12B	60	42.772	Carlito_syrichta
ENSMAMG00000011998	rbm12b	87	50.649	ENSCAPG00000003543	RBM12B	59	50.649	Cavia_aperea
ENSMAMG00000011998	rbm12b	87	50.649	ENSCPOG00000007815	RBM12B	59	50.649	Cavia_porcellus
ENSMAMG00000011998	rbm12b	100	43.539	ENSCATG00000030769	RBM12B	77	43.539	Cercocebus_atys
ENSMAMG00000011998	rbm12b	87	50.649	ENSCLAG00000017617	RBM12B	59	50.649	Chinchilla_lanigera
ENSMAMG00000011998	rbm12b	100	43.539	ENSCSAG00000018559	RBM12B	67	43.539	Chlorocebus_sabaeus
ENSMAMG00000011998	rbm12b	84	46.032	ENSCHOG00000008934	RBM12B	58	46.032	Choloepus_hoffmanni
ENSMAMG00000011998	rbm12b	100	40.374	ENSCPBG00000003061	RBM12B	100	40.374	Chrysemys_picta_bellii
ENSMAMG00000011998	rbm12b	100	43.539	ENSCANG00000030379	RBM12B	77	43.539	Colobus_angolensis_palliatus
ENSMAMG00000011998	rbm12b	86	49.351	ENSCGRG00001008710	-	65	49.351	Cricetulus_griseus_chok1gshd
ENSMAMG00000011998	rbm12b	100	62.652	ENSCSEG00000004610	rbm12b	97	62.290	Cynoglossus_semilaevis
ENSMAMG00000011998	rbm12b	51	32.840	ENSCSEG00000001575	-	92	32.840	Cynoglossus_semilaevis
ENSMAMG00000011998	rbm12b	100	60.031	ENSCVAG00000011047	rbm12b	100	59.969	Cyprinodon_variegatus
ENSMAMG00000011998	rbm12b	74	38.756	ENSCVAG00000009259	-	99	38.756	Cyprinodon_variegatus
ENSMAMG00000011998	rbm12b	100	44.317	ENSDARG00000079717	rbm12b	82	67.073	Danio_rerio
ENSMAMG00000011998	rbm12b	65	56.322	ENSDARG00000055889	zgc:153215	99	30.812	Danio_rerio
ENSMAMG00000011998	rbm12b	86	49.351	ENSDNOG00000041608	RBM12B	56	49.351	Dasypus_novemcinctus
ENSMAMG00000011998	rbm12b	89	46.939	ENSDORG00000024034	-	62	46.939	Dipodomys_ordii
ENSMAMG00000011998	rbm12b	76	43.444	ENSETEG00000013005	-	67	43.444	Echinops_telfairi
ENSMAMG00000011998	rbm12b	73	30.508	ENSEBUG00000010930	-	85	30.625	Eptatretus_burgeri
ENSMAMG00000011998	rbm12b	86	49.351	ENSEASG00005016297	RBM12B	65	49.351	Equus_asinus_asinus
ENSMAMG00000011998	rbm12b	86	49.351	ENSECAG00000017870	RBM12B	59	49.351	Equus_caballus
ENSMAMG00000011998	rbm12b	86	50.649	ENSFCAG00000029274	RBM12B	67	50.649	Felis_catus
ENSMAMG00000011998	rbm12b	100	40.086	ENSFALG00000014893	RBM12B	100	40.656	Ficedula_albicollis
ENSMAMG00000011998	rbm12b	100	42.376	ENSFDAG00000005576	RBM12B	68	42.376	Fukomys_damarensis
ENSMAMG00000011998	rbm12b	100	59.034	ENSFHEG00000016425	rbm12b	100	59.690	Fundulus_heteroclitus
ENSMAMG00000011998	rbm12b	72	31.360	ENSFHEG00000014539	zgc:153215	96	31.360	Fundulus_heteroclitus
ENSMAMG00000011998	rbm12b	99	59.906	ENSGMOG00000013467	rbm12b	100	59.748	Gadus_morhua
ENSMAMG00000011998	rbm12b	100	41.491	ENSGALG00000035129	RBM12B	100	41.808	Gallus_gallus
ENSMAMG00000011998	rbm12b	72	30.845	ENSGAFG00000007845	zgc:153215	98	30.845	Gambusia_affinis
ENSMAMG00000011998	rbm12b	100	63.480	ENSGAFG00000007224	rbm12b	100	64.263	Gambusia_affinis
ENSMAMG00000011998	rbm12b	100	70.219	ENSGACG00000008682	rbm12b	99	70.219	Gasterosteus_aculeatus
ENSMAMG00000011998	rbm12b	100	40.967	ENSGAGG00000009774	RBM12B	100	40.967	Gopherus_agassizii
ENSMAMG00000011998	rbm12b	100	43.340	ENSGGOG00000011909	RBM12B	75	43.340	Gorilla_gorilla
ENSMAMG00000011998	rbm12b	100	66.260	ENSHBUG00000016227	rbm12b	100	66.107	Haplochromis_burtoni
ENSMAMG00000011998	rbm12b	100	41.683	ENSHGLG00000009063	RBM12B	69	41.683	Heterocephalus_glaber_female
ENSMAMG00000011998	rbm12b	100	41.683	ENSHGLG00100021324	RBM12B	69	41.683	Heterocephalus_glaber_male
ENSMAMG00000011998	rbm12b	100	57.300	ENSHCOG00000014952	rbm12b	100	56.986	Hippocampus_comes
ENSMAMG00000011998	rbm12b	73	56.410	ENSIPUG00000019731	zgc:153215	76	56.410	Ictalurus_punctatus
ENSMAMG00000011998	rbm12b	100	47.626	ENSIPUG00000001167	RBM12B	97	46.889	Ictalurus_punctatus
ENSMAMG00000011998	rbm12b	86	50.649	ENSSTOG00000027445	RBM12B	67	50.649	Ictidomys_tridecemlineatus
ENSMAMG00000011998	rbm12b	86	49.351	ENSJJAG00000004165	-	69	49.351	Jaculus_jaculus
ENSMAMG00000011998	rbm12b	100	58.934	ENSKMAG00000013715	rbm12b	100	58.934	Kryptolebias_marmoratus
ENSMAMG00000011998	rbm12b	74	32.640	ENSKMAG00000004958	zgc:153215	99	32.640	Kryptolebias_marmoratus
ENSMAMG00000011998	rbm12b	100	59.091	ENSKMAG00000013704	rbm12b	97	59.091	Kryptolebias_marmoratus
ENSMAMG00000011998	rbm12b	74	31.518	ENSLBEG00000002597	zgc:153215	99	32.227	Labrus_bergylta
ENSMAMG00000011998	rbm12b	100	42.493	ENSLACG00000007177	RBM12B	100	42.493	Latimeria_chalumnae
ENSMAMG00000011998	rbm12b	100	49.850	ENSLOCG00000018344	rbm12b	100	49.850	Lepisosteus_oculatus
ENSMAMG00000011998	rbm12b	87	46.250	ENSLAFG00000029949	RBM12B	67	46.250	Loxodonta_africana
ENSMAMG00000011998	rbm12b	100	43.539	ENSMFAG00000045430	RBM12B	77	43.539	Macaca_fascicularis
ENSMAMG00000011998	rbm12b	100	43.539	ENSMMUG00000005558	RBM12B	76	43.539	Macaca_mulatta
ENSMAMG00000011998	rbm12b	100	43.539	ENSMNEG00000041292	RBM12B	77	43.539	Macaca_nemestrina
ENSMAMG00000011998	rbm12b	100	43.539	ENSMLEG00000037288	RBM12B	76	43.539	Mandrillus_leucophaeus
ENSMAMG00000011998	rbm12b	100	64.798	ENSMZEG00005014845	rbm12b	99	63.950	Maylandia_zebra
ENSMAMG00000011998	rbm12b	100	68.069	ENSMZEG00005015005	rbm12b	100	67.551	Maylandia_zebra
ENSMAMG00000011998	rbm12b	75	44.146	ENSMGAG00000011985	RBM12B	99	44.530	Meleagris_gallopavo
ENSMAMG00000011998	rbm12b	86	49.351	ENSMAUG00000021752	-	67	49.351	Mesocricetus_auratus
ENSMAMG00000011998	rbm12b	100	43.028	ENSMICG00000036969	RBM12B	77	43.028	Microcebus_murinus
ENSMAMG00000011998	rbm12b	88	48.387	ENSMOCG00000005603	-	69	48.387	Microtus_ochrogaster
ENSMAMG00000011998	rbm12b	99	65.348	ENSMMOG00000002404	rbm12b	95	65.135	Mola_mola
ENSMAMG00000011998	rbm12b	91	46.139	ENSMODG00000007436	RBM12B	80	46.337	Monodelphis_domestica
ENSMAMG00000011998	rbm12b	73	33.539	ENSMALG00000001222	zgc:153215	98	33.539	Monopterus_albus
ENSMAMG00000011998	rbm12b	100	75.667	ENSMALG00000012059	rbm12b	100	75.667	Monopterus_albus
ENSMAMG00000011998	rbm12b	86	54.667	ENSMUSG00000046667	Rbm12b1	70	54.667	Mus_musculus
ENSMAMG00000011998	rbm12b	87	50.633	ENSMUSG00000052137	Rbm12b2	71	50.633	Mus_musculus
ENSMAMG00000011998	rbm12b	95	43.058	MGP_SPRETEiJ_G0026765	-	67	45.918	Mus_spretus
ENSMAMG00000011998	rbm12b	95	43.058	MGP_SPRETEiJ_G0026766	-	76	43.058	Mus_spretus
ENSMAMG00000011998	rbm12b	100	40.882	ENSMPUG00000018637	RBM12B	56	49.351	Mustela_putorius_furo
ENSMAMG00000011998	rbm12b	86	48.052	ENSMLUG00000002359	RBM12B	59	48.052	Myotis_lucifugus
ENSMAMG00000011998	rbm12b	86	48.052	ENSNGAG00000002801	-	61	48.052	Nannospalax_galili
ENSMAMG00000011998	rbm12b	74	43.396	ENSNBRG00000013644	zgc:153215	81	43.396	Neolamprologus_brichardi
ENSMAMG00000011998	rbm12b	100	69.159	ENSNBRG00000015057	rbm12b	100	68.643	Neolamprologus_brichardi
ENSMAMG00000011998	rbm12b	100	43.313	ENSNLEG00000032050	RBM12B	76	43.313	Nomascus_leucogenys
ENSMAMG00000011998	rbm12b	87	50.649	ENSODEG00000019204	RBM12B	60	50.649	Octodon_degus
ENSMAMG00000011998	rbm12b	100	69.626	ENSONIG00000020612	rbm12b	100	69.111	Oreochromis_niloticus
ENSMAMG00000011998	rbm12b	100	39.943	ENSOANG00000015735	-	97	40.948	Ornithorhynchus_anatinus
ENSMAMG00000011998	rbm12b	86	49.351	ENSOCUG00000010353	RBM12B	65	49.351	Oryctolagus_cuniculus
ENSMAMG00000011998	rbm12b	100	61.934	ENSORLG00000008228	rbm12b	97	61.912	Oryzias_latipes
ENSMAMG00000011998	rbm12b	100	62.246	ENSORLG00020013619	rbm12b	97	62.069	Oryzias_latipes_hni
ENSMAMG00000011998	rbm12b	100	62.090	ENSORLG00015019999	rbm12b	97	62.069	Oryzias_latipes_hsok
ENSMAMG00000011998	rbm12b	100	64.734	ENSOMEG00000022523	rbm12b	97	64.734	Oryzias_melastigma
ENSMAMG00000011998	rbm12b	75	31.942	ENSOMEG00000004220	zgc:153215	98	32.568	Oryzias_melastigma
ENSMAMG00000011998	rbm12b	100	44.289	ENSOGAG00000002979	RBM12B	68	44.289	Otolemur_garnettii
ENSMAMG00000011998	rbm12b	86	50.649	ENSPTIG00000020071	RBM12B	67	50.649	Panthera_tigris_altaica
ENSMAMG00000011998	rbm12b	100	43.168	ENSPTRG00000020420	RBM12B	74	43.168	Pan_troglodytes
ENSMAMG00000011998	rbm12b	100	43.539	ENSPANG00000035535	RBM12B	76	43.539	Papio_anubis
ENSMAMG00000011998	rbm12b	73	34.921	ENSPKIG00000014851	zgc:153215	99	34.921	Paramormyrops_kingsleyae
ENSMAMG00000011998	rbm12b	100	52.719	ENSPKIG00000018719	rbm12b	99	51.885	Paramormyrops_kingsleyae
ENSMAMG00000011998	rbm12b	100	40.343	ENSPSIG00000001348	RBM12B	100	40.343	Pelodiscus_sinensis
ENSMAMG00000011998	rbm12b	77	51.447	ENSPMGG00000012348	-	93	51.447	Periophthalmus_magnuspinnatus
ENSMAMG00000011998	rbm12b	90	44.660	ENSPEMG00000008279	-	70	44.660	Peromyscus_maniculatus_bairdii
ENSMAMG00000011998	rbm12b	93	47.002	ENSPCIG00000008556	RBM12B	83	46.809	Phascolarctos_cinereus
ENSMAMG00000011998	rbm12b	65	53.488	ENSPFOG00000017451	zgc:153215	65	53.488	Poecilia_formosa
ENSMAMG00000011998	rbm12b	100	62.539	ENSPFOG00000020937	rbm12b	97	63.125	Poecilia_formosa
ENSMAMG00000011998	rbm12b	74	30.833	ENSPLAG00000000232	zgc:153215	99	30.833	Poecilia_latipinna
ENSMAMG00000011998	rbm12b	100	63.693	ENSPLAG00000018782	rbm12b	100	64.119	Poecilia_latipinna
ENSMAMG00000011998	rbm12b	100	63.693	ENSPMEG00000011418	rbm12b	100	64.119	Poecilia_mexicana
ENSMAMG00000011998	rbm12b	74	31.250	ENSPMEG00000016662	zgc:153215	99	31.458	Poecilia_mexicana
ENSMAMG00000011998	rbm12b	73	30.815	ENSPREG00000018608	zgc:153215	99	30.815	Poecilia_reticulata
ENSMAMG00000011998	rbm12b	100	63.380	ENSPREG00000020770	rbm12b	100	64.163	Poecilia_reticulata
ENSMAMG00000011998	rbm12b	100	43.340	ENSPPYG00000018745	RBM12B	67	43.340	Pongo_abelii
ENSMAMG00000011998	rbm12b	100	43.227	ENSPCOG00000023546	RBM12B	76	43.227	Propithecus_coquereli
ENSMAMG00000011998	rbm12b	86	49.351	ENSPVAG00000011803	RBM12B	61	49.351	Pteropus_vampyrus
ENSMAMG00000011998	rbm12b	100	68.536	ENSPNYG00000016696	rbm12b	100	68.019	Pundamilia_nyererei
ENSMAMG00000011998	rbm12b	74	48.624	ENSPNAG00000025628	zgc:153215	77	48.624	Pygocentrus_nattereri
ENSMAMG00000011998	rbm12b	100	48.494	ENSPNAG00000008126	rbm12b	97	48.214	Pygocentrus_nattereri
ENSMAMG00000011998	rbm12b	86	50.633	ENSRNOG00000016330	Rbm12b	70	52.000	Rattus_norvegicus
ENSMAMG00000011998	rbm12b	74	42.412	ENSRNOG00000055292	LOC679087	65	42.442	Rattus_norvegicus
ENSMAMG00000011998	rbm12b	100	43.539	ENSRBIG00000035046	RBM12B	76	43.539	Rhinopithecus_bieti
ENSMAMG00000011998	rbm12b	100	43.513	ENSRROG00000023660	RBM12B	79	43.513	Rhinopithecus_roxellana
ENSMAMG00000011998	rbm12b	90	43.689	ENSSBOG00000027592	RBM12B	67	43.689	Saimiri_boliviensis_boliviensis
ENSMAMG00000011998	rbm12b	91	46.535	ENSSHAG00000015335	RBM12B	82	46.733	Sarcophilus_harrisii
ENSMAMG00000011998	rbm12b	74	36.653	ENSSFOG00015009427	zgc:153215	99	36.653	Scleropages_formosus
ENSMAMG00000011998	rbm12b	100	49.329	ENSSFOG00015001584	rbm12b	100	49.329	Scleropages_formosus
ENSMAMG00000011998	rbm12b	100	72.770	ENSSMAG00000019708	rbm12b	100	71.944	Scophthalmus_maximus
ENSMAMG00000011998	rbm12b	74	32.600	ENSSMAG00000019013	zgc:153215	96	32.600	Scophthalmus_maximus
ENSMAMG00000011998	rbm12b	100	77.982	ENSSDUG00000006856	rbm12b	100	77.982	Seriola_dumerili
ENSMAMG00000011998	rbm12b	74	31.213	ENSSDUG00000012545	zgc:153215	98	31.673	Seriola_dumerili
ENSMAMG00000011998	rbm12b	100	78.135	ENSSLDG00000016156	rbm12b	100	78.135	Seriola_lalandi_dorsalis
ENSMAMG00000011998	rbm12b	77	44.101	ENSSARG00000011845	-	68	44.444	Sorex_araneus
ENSMAMG00000011998	rbm12b	74	41.973	ENSSPUG00000016954	RBM12B	91	41.811	Sphenodon_punctatus
ENSMAMG00000011998	rbm12b	74	32.409	ENSSPAG00000023584	zgc:153215	98	32.120	Stegastes_partitus
ENSMAMG00000011998	rbm12b	100	69.797	ENSSPAG00000006774	rbm12b	100	69.797	Stegastes_partitus
ENSMAMG00000011998	rbm12b	86	48.000	ENSSSCG00000006110	RBM12B	57	48.000	Sus_scrofa
ENSMAMG00000011998	rbm12b	74	43.725	ENSTGUG00000011860	RBM12B	96	43.725	Taeniopygia_guttata
ENSMAMG00000011998	rbm12b	100	60.945	ENSTRUG00000013738	rbm12b	100	60.692	Takifugu_rubripes
ENSMAMG00000011998	rbm12b	55	30.964	ENSTNIG00000018374	-	98	31.218	Tetraodon_nigroviridis
ENSMAMG00000011998	rbm12b	75	42.430	ENSTBEG00000000449	RBM12B	65	42.315	Tupaia_belangeri
ENSMAMG00000011998	rbm12b	100	42.600	ENSUAMG00000023639	RBM12B	67	44.898	Ursus_americanus
ENSMAMG00000011998	rbm12b	100	43.585	ENSUMAG00000016008	RBM12B	72	43.585	Ursus_maritimus
ENSMAMG00000011998	rbm12b	86	48.052	ENSVVUG00000002694	RBM12B	64	48.052	Vulpes_vulpes
ENSMAMG00000011998	rbm12b	100	36.457	ENSXETG00000014694	rbm12b	100	40.125	Xenopus_tropicalis
ENSMAMG00000011998	rbm12b	78	35.503	ENSXETG00000014696	rbm12b	99	36.364	Xenopus_tropicalis
ENSMAMG00000011998	rbm12b	74	32.411	ENSXCOG00000019654	zgc:153215	98	32.411	Xiphophorus_couchianus
ENSMAMG00000011998	rbm12b	60	39.506	ENSXMAG00000013169	-	93	39.506	Xiphophorus_maculatus
ENSMAMG00000011998	rbm12b	100	64.107	ENSXMAG00000014213	rbm12b	100	64.890	Xiphophorus_maculatus