EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000012038 (Gene tree)
Gene ID: 113136194
Gene Symbol: zgc:153215
Alias: fe11g10|im:6907990|wu:fe11g10
Full Name: RNA-binding protein 12B-A-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 1698 bases
Position: chrOOHQ01000011.1:1263370-1265067
Accession: 113136194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000017812	RRM_1	PF00076.22	5.6e-19	1	2
ENSMAMP00000017812	RRM_1	PF00076.22	5.6e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000018285	-	1698	-	ENSMAMP00000017812	565 (aa)	XP_026172551	UPI000E45BAB1

Gene Model

Click here to download ENSMAMG00000012038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000012038's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000012038	zgc:153215	99	30.319	ENSMAMG00000011998	rbm12b	74	30.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000012038	zgc:153215	78	78.378	ENSAPOG00000008836	zgc:153215	91	78.378	Acanthochromis_polyacanthus
ENSMAMG00000012038	zgc:153215	98	52.065	ENSACIG00000013317	zgc:153215	99	52.065	Amphilophus_citrinellus
ENSMAMG00000012038	zgc:153215	73	51.136	ENSACIG00000014943	rbm12b	100	51.136	Amphilophus_citrinellus
ENSMAMG00000012038	zgc:153215	81	77.632	ENSAOCG00000010819	zgc:153215	99	51.510	Amphiprion_ocellaris
ENSMAMG00000012038	zgc:153215	100	63.823	ENSATEG00000001886	zgc:153215	100	63.823	Anabas_testudineus
ENSMAMG00000012038	zgc:153215	79	50.562	ENSAPLG00000002020	RBM12B	61	50.562	Anas_platyrhynchos
ENSMAMG00000012038	zgc:153215	99	53.968	ENSACLG00000007675	zgc:153215	100	53.968	Astatotilapia_calliptera
ENSMAMG00000012038	zgc:153215	79	50.000	ENSACLG00000005578	rbm12b	97	50.000	Astatotilapia_calliptera
ENSMAMG00000012038	zgc:153215	93	39.773	ENSAMXG00000020853	zgc:153215	83	43.787	Astyanax_mexicanus
ENSMAMG00000012038	zgc:153215	94	31.122	ENSCGRG00001008710	-	56	31.122	Cricetulus_griseus_chok1gshd
ENSMAMG00000012038	zgc:153215	67	60.000	ENSCSEG00000001575	-	99	60.000	Cynoglossus_semilaevis
ENSMAMG00000012038	zgc:153215	81	48.544	ENSCSEG00000004610	rbm12b	69	48.544	Cynoglossus_semilaevis
ENSMAMG00000012038	zgc:153215	92	37.500	ENSCVAG00000011047	rbm12b	74	37.500	Cyprinodon_variegatus
ENSMAMG00000012038	zgc:153215	96	47.753	ENSCVAG00000009259	-	100	47.753	Cyprinodon_variegatus
ENSMAMG00000012038	zgc:153215	99	35.884	ENSDARG00000055889	zgc:153215	99	36.054	Danio_rerio
ENSMAMG00000012038	zgc:153215	81	47.500	ENSETEG00000013005	-	58	47.500	Echinops_telfairi
ENSMAMG00000012038	zgc:153215	99	42.105	ENSELUG00000009039	zgc:153215	97	41.708	Esox_lucius
ENSMAMG00000012038	zgc:153215	98	41.579	ENSFHEG00000014539	zgc:153215	96	41.579	Fundulus_heteroclitus
ENSMAMG00000012038	zgc:153215	79	47.619	ENSFHEG00000016425	rbm12b	74	47.619	Fundulus_heteroclitus
ENSMAMG00000012038	zgc:153215	98	47.302	ENSGAFG00000007845	zgc:153215	98	47.302	Gambusia_affinis
ENSMAMG00000012038	zgc:153215	99	57.804	ENSHBUG00000016150	zgc:153215	100	57.804	Haplochromis_burtoni
ENSMAMG00000012038	zgc:153215	99	31.818	ENSHCOG00000014952	rbm12b	99	31.818	Hippocampus_comes
ENSMAMG00000012038	zgc:153215	99	34.391	ENSIPUG00000019731	zgc:153215	99	34.391	Ictalurus_punctatus
ENSMAMG00000012038	zgc:153215	95	52.571	ENSKMAG00000004958	zgc:153215	99	52.571	Kryptolebias_marmoratus
ENSMAMG00000012038	zgc:153215	99	54.885	ENSLBEG00000002597	zgc:153215	99	54.885	Labrus_bergylta
ENSMAMG00000012038	zgc:153215	80	51.136	ENSMZEG00005014845	rbm12b	72	51.136	Maylandia_zebra
ENSMAMG00000012038	zgc:153215	99	57.461	ENSMZEG00005005435	zgc:153215	100	57.461	Maylandia_zebra
ENSMAMG00000012038	zgc:153215	94	31.122	ENSMAUG00000021752	-	58	31.122	Mesocricetus_auratus
ENSMAMG00000012038	zgc:153215	80	46.739	ENSMMOG00000002404	rbm12b	68	46.739	Mola_mola
ENSMAMG00000012038	zgc:153215	87	69.531	ENSMMOG00000003372	zgc:153215	99	72.656	Mola_mola
ENSMAMG00000012038	zgc:153215	79	53.409	ENSMALG00000012059	rbm12b	66	53.409	Monopterus_albus
ENSMAMG00000012038	zgc:153215	99	54.885	ENSMALG00000001222	zgc:153215	99	54.885	Monopterus_albus
ENSMAMG00000012038	zgc:153215	94	32.143	ENSMUSG00000052137	Rbm12b2	59	32.143	Mus_musculus
ENSMAMG00000012038	zgc:153215	94	32.143	ENSMUSG00000046667	Rbm12b1	58	32.143	Mus_musculus
ENSMAMG00000012038	zgc:153215	94	30.612	MGP_SPRETEiJ_G0026766	-	58	30.612	Mus_spretus
ENSMAMG00000012038	zgc:153215	95	30.151	MGP_SPRETEiJ_G0026765	-	53	30.151	Mus_spretus
ENSMAMG00000012038	zgc:153215	94	30.612	ENSNGAG00000002801	-	52	30.612	Nannospalax_galili
ENSMAMG00000012038	zgc:153215	99	56.775	ENSNBRG00000013644	zgc:153215	100	56.775	Neolamprologus_brichardi
ENSMAMG00000012038	zgc:153215	99	56.915	ENSONIG00000006054	zgc:153215	100	56.915	Oreochromis_niloticus
ENSMAMG00000012038	zgc:153215	79	53.571	ENSORLG00000008228	rbm12b	72	53.571	Oryzias_latipes
ENSMAMG00000012038	zgc:153215	79	53.571	ENSORLG00020013619	rbm12b	72	53.571	Oryzias_latipes_hni
ENSMAMG00000012038	zgc:153215	79	53.571	ENSORLG00015019999	rbm12b	72	53.571	Oryzias_latipes_hsok
ENSMAMG00000012038	zgc:153215	79	69.512	ENSOMEG00000004220	zgc:153215	96	53.906	Oryzias_melastigma
ENSMAMG00000012038	zgc:153215	79	52.381	ENSOMEG00000022523	rbm12b	72	52.381	Oryzias_melastigma
ENSMAMG00000012038	zgc:153215	99	35.097	ENSPKIG00000014851	zgc:153215	99	35.097	Paramormyrops_kingsleyae
ENSMAMG00000012038	zgc:153215	53	42.748	ENSPMGG00000012348	-	89	42.748	Periophthalmus_magnuspinnatus
ENSMAMG00000012038	zgc:153215	94	31.122	ENSPEMG00000008279	-	57	31.122	Peromyscus_maniculatus_bairdii
ENSMAMG00000012038	zgc:153215	99	62.136	ENSPFOG00000017451	zgc:153215	84	62.136	Poecilia_formosa
ENSMAMG00000012038	zgc:153215	85	67.606	ENSPLAG00000000232	zgc:153215	99	67.606	Poecilia_latipinna
ENSMAMG00000012038	zgc:153215	86	56.075	ENSPMEG00000016662	zgc:153215	99	56.075	Poecilia_mexicana
ENSMAMG00000012038	zgc:153215	99	46.168	ENSPREG00000018608	zgc:153215	99	46.168	Poecilia_reticulata
ENSMAMG00000012038	zgc:153215	82	73.404	ENSPNYG00000018125	zgc:153215	97	73.404	Pundamilia_nyererei
ENSMAMG00000012038	zgc:153215	99	36.471	ENSPNAG00000025628	zgc:153215	99	36.471	Pygocentrus_nattereri
ENSMAMG00000012038	zgc:153215	94	30.151	ENSRNOG00000055292	LOC679087	65	30.151	Rattus_norvegicus
ENSMAMG00000012038	zgc:153215	94	30.612	ENSRNOG00000016330	Rbm12b	57	30.612	Rattus_norvegicus
ENSMAMG00000012038	zgc:153215	79	48.810	ENSRBIG00000035046	RBM12B	54	48.810	Rhinopithecus_bieti
ENSMAMG00000012038	zgc:153215	99	36.842	ENSSFOG00015009427	zgc:153215	99	36.842	Scleropages_formosus
ENSMAMG00000012038	zgc:153215	88	71.111	ENSSMAG00000019013	zgc:153215	97	71.111	Scophthalmus_maximus
ENSMAMG00000012038	zgc:153215	100	57.672	ENSSDUG00000012545	zgc:153215	99	57.394	Seriola_dumerili
ENSMAMG00000012038	zgc:153215	100	65.641	ENSSLDG00000013581	zgc:153215	99	65.641	Seriola_lalandi_dorsalis
ENSMAMG00000012038	zgc:153215	79	46.429	ENSSARG00000011845	-	57	46.429	Sorex_araneus
ENSMAMG00000012038	zgc:153215	89	59.231	ENSSPAG00000023584	zgc:153215	99	65.179	Stegastes_partitus
ENSMAMG00000012038	zgc:153215	79	51.190	ENSTRUG00000013738	rbm12b	74	51.190	Takifugu_rubripes
ENSMAMG00000012038	zgc:153215	76	50.231	ENSTNIG00000018374	-	99	51.039	Tetraodon_nigroviridis
ENSMAMG00000012038	zgc:153215	84	31.193	ENSXETG00000025920	-	97	31.193	Xenopus_tropicalis
ENSMAMG00000012038	zgc:153215	80	46.512	ENSXETG00000014696	rbm12b	67	46.512	Xenopus_tropicalis
ENSMAMG00000012038	zgc:153215	81	51.546	ENSXETG00000014694	rbm12b	96	51.546	Xenopus_tropicalis
ENSMAMG00000012038	zgc:153215	99	46.263	ENSXCOG00000019654	zgc:153215	98	46.263	Xiphophorus_couchianus
ENSMAMG00000012038	zgc:153215	63	68.852	ENSXMAG00000013169	-	88	68.852	Xiphophorus_maculatus