EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000012185 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 8988 bases
Position: chrOOHQ01000035.1:13648020-13657007
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000018031	zf-C2H2	PF00096.26	1.7e-16	1	3
ENSMAMP00000018031	zf-C2H2	PF00096.26	1.7e-16	2	3
ENSMAMP00000018031	zf-C2H2	PF00096.26	1.7e-16	3	3
ENSMAMP00000018031	zf-met	PF12874.7	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000018505	-	3309	-	ENSMAMP00000018031	552 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000012185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000012185's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000012185	-	94	49.906	ENSMAMG00000012191	-	78	54.343
ENSMAMG00000012185	-	57	44.444	ENSMAMG00000022147	-	67	44.444
ENSMAMG00000012185	-	87	51.120	ENSMAMG00000012196	-	64	52.423
ENSMAMG00000012185	-	52	38.158	ENSMAMG00000004457	PRDM15	57	38.158
ENSMAMG00000012185	-	54	45.000	ENSMAMG00000001157	znf236	55	45.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000012185	-	93	50.870	ENSAPOG00000014259	-	67	53.111	Acanthochromis_polyacanthus
ENSMAMG00000012185	-	95	56.203	ENSACLG00000026521	-	76	56.167	Astatotilapia_calliptera
ENSMAMG00000012185	-	50	35.398	ENSHBUG00000004077	-	77	47.273	Haplochromis_burtoni
ENSMAMG00000012185	-	95	57.707	ENSHBUG00000003157	-	77	57.786	Haplochromis_burtoni
ENSMAMG00000012185	-	95	56.203	ENSMZEG00005025468	-	76	56.167	Maylandia_zebra
ENSMAMG00000012185	-	93	68.511	ENSMALG00000017313	-	74	66.730	Monopterus_albus
ENSMAMG00000012185	-	53	37.500	ENSPFOG00000022486	-	55	37.500	Poecilia_formosa
ENSMAMG00000012185	-	53	37.500	ENSPLAG00000006183	-	55	37.500	Poecilia_latipinna
ENSMAMG00000012185	-	53	37.500	ENSPMEG00000014769	-	55	37.500	Poecilia_mexicana
ENSMAMG00000012185	-	99	68.806	ENSSDUG00000009330	-	80	68.627	Seriola_dumerili