EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000012191 (Gene tree)
Gene ID: 113134313
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Minus strand
Length: 2538 bases
Position: chrOOHQ01000035.1:13653417-13655954
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000018039	zf-C2H2	PF00096.26	3e-13	1	2
ENSMAMP00000018039	zf-C2H2	PF00096.26	3e-13	2	2
ENSMAMP00000018039	zf-met	PF12874.7	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000018514	-	2141	-	ENSMAMP00000018039	551 (aa)	-	-

Gene Model

Click here to download ENSMAMG00000012191's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000012191's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000012191	-	56	37.791	ENSMAMG00000022152	-	80	40.690
ENSMAMG00000012191	-	78	54.343	ENSMAMG00000012185	-	94	49.906
ENSMAMG00000012191	-	54	38.636	ENSMAMG00000008000	znf341	62	38.636
ENSMAMG00000012191	-	54	48.148	ENSMAMG00000022147	-	67	48.148
ENSMAMG00000012191	-	95	57.741	ENSMAMG00000012196	-	80	57.013
ENSMAMG00000012191	-	56	33.133	ENSMAMG00000017939	-	79	32.432
ENSMAMG00000012191	-	52	37.500	ENSMAMG00000019301	-	99	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000012191	-	99	55.676	ENSAPOG00000014259	-	81	56.036	Acanthochromis_polyacanthus
ENSMAMG00000012191	-	83	46.105	ENSACLG00000026521	-	72	45.059	Astatotilapia_calliptera
ENSMAMG00000012191	-	83	46.526	ENSHBUG00000003157	-	73	46.838	Haplochromis_burtoni
ENSMAMG00000012191	-	83	46.105	ENSMZEG00005025468	-	72	45.059	Maylandia_zebra
ENSMAMG00000012191	-	94	53.604	ENSMALG00000017313	-	77	53.618	Monopterus_albus
ENSMAMG00000012191	-	99	52.920	ENSSDUG00000009330	-	79	53.274	Seriola_dumerili