EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000012192 (Gene tree)
Gene ID: 113134043
Gene Symbol: trnau1apb
Alias: secp43|trnau1ap|trnau1apl|trspap1|wu:fa56b07|wu:fc12c07|wu:fc69f09|zgc:113964|zgc:77884
Full Name: tRNA selenocysteine 1-associated protein 1-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 6879 bases
Position: chrOOHQ01000035.1:4549013-4555891
Accession: 113134043
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000018041	RRM_1	PF00076.22	2.4e-30	1	2
ENSMAMP00000018041	RRM_1	PF00076.22	2.4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000018515	-	1230	XM_026313240	ENSMAMP00000018041	338 (aa)	XP_026169025	UPI000E45F101

Gene Model

Click here to download ENSMAMG00000012192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000012192's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000012192	trnau1apb	65	30.460	ENSMAMG00000013350	tial1	78	30.460
ENSMAMG00000012192	trnau1apb	51	31.609	ENSMAMG00000020566	-	68	31.034
ENSMAMG00000012192	trnau1apb	95	43.243	ENSMAMG00000001247	trnau1apa	94	42.687

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000012192	trnau1apb	100	77.581	ENSAPOG00000010086	trnau1apb	100	79.646	Acanthochromis_polyacanthus
ENSMAMG00000012192	trnau1apb	100	84.615	ENSACIG00000001863	trnau1apb	100	83.186	Amphilophus_citrinellus
ENSMAMG00000012192	trnau1apb	100	92.647	ENSAOCG00000011891	trnau1apb	100	92.353	Amphiprion_ocellaris
ENSMAMG00000012192	trnau1apb	100	79.586	ENSAPEG00000008029	trnau1apb	100	91.471	Amphiprion_percula
ENSMAMG00000012192	trnau1apb	100	92.647	ENSATEG00000002196	trnau1apb	100	92.647	Anabas_testudineus
ENSMAMG00000012192	trnau1apb	100	84.457	ENSACLG00000003016	trnau1apb	100	83.090	Astatotilapia_calliptera
ENSMAMG00000012192	trnau1apb	99	64.985	ENSAMXG00000001805	trnau1apb	99	66.071	Astyanax_mexicanus
ENSMAMG00000012192	trnau1apb	99	86.431	ENSCSEG00000018215	trnau1apb	99	84.956	Cynoglossus_semilaevis
ENSMAMG00000012192	trnau1apb	95	80.909	ENSCVAG00000017866	trnau1apb	100	79.697	Cyprinodon_variegatus
ENSMAMG00000012192	trnau1apb	100	64.412	ENSDARG00000056475	trnau1apb	99	65.000	Danio_rerio
ENSMAMG00000012192	trnau1apb	100	64.118	ENSELUG00000016683	trnau1apb	99	65.294	Esox_lucius
ENSMAMG00000012192	trnau1apb	100	82.997	ENSFHEG00000001267	trnau1apb	100	82.424	Fundulus_heteroclitus
ENSMAMG00000012192	trnau1apb	99	70.857	ENSGMOG00000001160	trnau1apb	99	73.964	Gadus_morhua
ENSMAMG00000012192	trnau1apb	52	94.915	ENSGAFG00000006770	trnau1apb	100	74.412	Gambusia_affinis
ENSMAMG00000012192	trnau1apb	100	82.891	ENSGACG00000014944	trnau1apb	100	82.301	Gasterosteus_aculeatus
ENSMAMG00000012192	trnau1apb	70	41.494	ENSGAGG00000022384	-	78	39.918	Gopherus_agassizii
ENSMAMG00000012192	trnau1apb	100	92.035	ENSHBUG00000018944	trnau1apb	99	92.035	Haplochromis_burtoni
ENSMAMG00000012192	trnau1apb	68	83.043	ENSHCOG00000011350	trnau1apb	77	81.667	Hippocampus_comes
ENSMAMG00000012192	trnau1apb	99	60.000	ENSIPUG00000008843	tsp1l	100	65.579	Ictalurus_punctatus
ENSMAMG00000012192	trnau1apb	64	90.826	ENSKMAG00000010082	trnau1apb	99	84.795	Kryptolebias_marmoratus
ENSMAMG00000012192	trnau1apb	100	89.086	ENSLBEG00000020480	trnau1apb	100	88.496	Labrus_bergylta
ENSMAMG00000012192	trnau1apb	100	52.478	ENSLOCG00000013175	trnau1apb	99	53.079	Lepisosteus_oculatus
ENSMAMG00000012192	trnau1apb	100	92.035	ENSMZEG00005014852	trnau1apb	99	92.035	Maylandia_zebra
ENSMAMG00000012192	trnau1apb	71	39.256	ENSMGAG00000003234	-	98	40.329	Meleagris_gallopavo
ENSMAMG00000012192	trnau1apb	97	79.300	ENSMMOG00000021521	trnau1apb	100	79.300	Mola_mola
ENSMAMG00000012192	trnau1apb	100	77.515	ENSMALG00000003772	trnau1apb	100	76.627	Monopterus_albus
ENSMAMG00000012192	trnau1apb	97	85.498	ENSNBRG00000000751	trnau1apb	99	84.084	Neolamprologus_brichardi
ENSMAMG00000012192	trnau1apb	99	80.000	ENSONIG00000016639	trnau1apb	100	78.571	Oreochromis_niloticus
ENSMAMG00000012192	trnau1apb	66	89.732	ENSORLG00000013265	trnau1apb	99	83.430	Oryzias_latipes
ENSMAMG00000012192	trnau1apb	100	84.211	ENSORLG00020004464	trnau1apb	100	83.436	Oryzias_latipes_hni
ENSMAMG00000012192	trnau1apb	100	84.211	ENSORLG00015021098	trnau1apb	99	84.211	Oryzias_latipes_hsok
ENSMAMG00000012192	trnau1apb	100	72.965	ENSOMEG00000016531	trnau1apb	99	85.174	Oryzias_melastigma
ENSMAMG00000012192	trnau1apb	100	59.649	ENSPKIG00000007995	trnau1apb	99	61.047	Paramormyrops_kingsleyae
ENSMAMG00000012192	trnau1apb	70	43.154	ENSPSIG00000004189	-	78	40.741	Pelodiscus_sinensis
ENSMAMG00000012192	trnau1apb	79	78.661	ENSPMGG00000018509	trnau1apb	97	79.498	Periophthalmus_magnuspinnatus
ENSMAMG00000012192	trnau1apb	100	84.104	ENSPFOG00000003938	trnau1apb	99	82.948	Poecilia_formosa
ENSMAMG00000012192	trnau1apb	100	84.104	ENSPLAG00000015480	trnau1apb	99	82.948	Poecilia_latipinna
ENSMAMG00000012192	trnau1apb	100	84.104	ENSPMEG00000012743	trnau1apb	99	82.948	Poecilia_mexicana
ENSMAMG00000012192	trnau1apb	100	82.370	ENSPREG00000015035	trnau1apb	99	81.503	Poecilia_reticulata
ENSMAMG00000012192	trnau1apb	100	81.818	ENSPNYG00000012127	trnau1apb	100	80.466	Pundamilia_nyererei
ENSMAMG00000012192	trnau1apb	99	64.809	ENSPNAG00000019138	trnau1apb	99	66.568	Pygocentrus_nattereri
ENSMAMG00000012192	trnau1apb	99	60.058	ENSSFOG00015014158	trnau1apb	98	64.012	Scleropages_formosus
ENSMAMG00000012192	trnau1apb	99	87.941	ENSSMAG00000001745	trnau1apb	99	87.906	Scophthalmus_maximus
ENSMAMG00000012192	trnau1apb	99	93.215	ENSSDUG00000011109	trnau1apb	99	94.395	Seriola_dumerili
ENSMAMG00000012192	trnau1apb	99	92.920	ENSSLDG00000012947	trnau1apb	99	94.100	Seriola_lalandi_dorsalis
ENSMAMG00000012192	trnau1apb	70	35.458	ENSSPUG00000016701	-	82	35.484	Sphenodon_punctatus
ENSMAMG00000012192	trnau1apb	100	93.824	ENSSPAG00000006917	trnau1apb	100	92.353	Stegastes_partitus
ENSMAMG00000012192	trnau1apb	100	80.645	ENSTRUG00000008608	trnau1apb	99	79.765	Takifugu_rubripes
ENSMAMG00000012192	trnau1apb	99	68.750	ENSTNIG00000000916	trnau1apb	100	66.369	Tetraodon_nigroviridis
ENSMAMG00000012192	trnau1apb	94	75.153	ENSXCOG00000007974	trnau1apb	94	75.153	Xiphophorus_couchianus
ENSMAMG00000012192	trnau1apb	100	84.104	ENSXMAG00000029918	trnau1apb	99	82.948	Xiphophorus_maculatus